KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:16 2014 Check: 00 .. Name: ENSBTAP00000011212/1-460 Len: 490 Check: 925 Weight: 1.00 Name: ENSP00000313681/1-470 Len: 490 Check: 5288 Weight: 1.00 Name: ENSTTRP00000015089/1-473 Len: 490 Check: 7629 Weight: 1.00 Name: bmy_13778T0/1-477 Len: 490 Check: 6672 Weight: 1.00 Name: BACU020380/1-476 Len: 490 Check: 490 Weight: 1.00 // 1 50 ENSBTAP00000011212/1-460 ---------- ----SAVSSP ---------S DPATAGNDAG APTAPATGGE ENSP00000313681/1-470 MSAQVLGFLR SWTPLPLAAP ---------R GPAAAGNDAG APAATAPGGE ENSTTRP00000015089/1-473 MSTHVLGFSR NWTPLLLAAP ---------G DPATAGNDTG APTAPAPGGE bmy_13778T0/1-477 ----MLG--- --CPVRMGTP RPVYTAKLLS DPATAGNDAG APTAPAPGGE BACU020380/1-476 MSTHVLGFSR NWTPLPLAAP RGAVSSP--S DPATAGNDAG APTAPAPGGE 51 100 ENSBTAP00000011212/1-460 GEPHSRHREA RLGSTDKELK SGAAAADSVR TAPGTPRQRG ---EVMDAAG ENSP00000313681/1-470 GEPHSRPCDA RLGSTDKELK AGAAATGSAP TAPGTPWQRE PRVEVMDPAG ENSTTRP00000015089/1-473 GEPHSRHRDA RLGRTDKELK AGAAAADSAP TAPGTPWQRG PRVEVMDAAG bmy_13778T0/1-477 GEPHSRHQDA RLGSTDKELK AGAAAADSAP TAPGTPWQRG PRVAVMDAAG BACU020380/1-476 GETHSRHQDA RLGSTDKELK AGAAAADSAP TAPGTPWHRG PRVAVMDAAG 101 150 ENSBTAP00000011212/1-460 GSRNTLPRPC HVLVLLNPRG GKGKALQLFR SHVQPLLAQA DVSFTLMLTE ENSP00000313681/1-470 GPRGVLPRPC RVLVLLNPRG GKGKALQLFR SHVQPLLAEA EISFTLMLTE ENSTTRP00000015089/1-473 GSRNPLPRPC RVLVLLFRRD RKGRAAKPSW PGEEPLLAQA DVSFTLTLTE bmy_13778T0/1-477 GSRNPLPRPC RVLVLLNPRG GKGKALQLFR SHVQPLLAQA DVSFTLTLTE BACU020380/1-476 GSRNPLPRPC RVLVLLNPRG GKGKALQLFR SHVQPLLAQA DVSFTLTLTE 151 200 ENSBTAP00000011212/1-460 RRNHARELVR AEDLRRWDAL VVMSGDGLIH EVVNGLMERP DWETAIQKPL ENSP00000313681/1-470 RRNHARELVR SEELGRWDAL VVMSGDGLMH EVVNGLMERP DWETAIQKPL ENSTTRP00000015089/1-473 RRNHARELVR AEDLRRWDAL VVMSGDGLMH EVVNGLMERP DWETAIQKPL bmy_13778T0/1-477 RRNHARELVR AEDLRRWDAL VVMSGDGLMH EVVNGLMERP DWETAIQKPL BACU020380/1-476 RRNHARELVR AEDLRRWDAL VVMSGDGLMH EVVNGLMERP DWETAIQKPL 201 250 ENSBTAP00000011212/1-460 CSLPAGSGNA VAASLNYYAG YEQVTKEDLL TNCTQLLCRR LLAPMDLLSL ENSP00000313681/1-470 CSLPAGSGNA LAASLNHYAG YEQVTNEDLL TNCTLLLCRR LLSPMNLLSL ENSTTRP00000015089/1-473 CSLPAGSGNA LAASVNHYAG FEQVTNEDLL TNCTRLLCHR LLAPMDLLSL bmy_13778T0/1-477 CSLPAGSGNA LAASVNHYAG YEQVTNEDLL TNCTRLLCRR LLAPMDLLSL BACU020380/1-476 CSLPAGSGNA LAASVNHYAG YEQVTNEDLL TNCTRLLCRR LLAPMDLLSL 251 300 ENSBTAP00000011212/1-460 QTACGQRLFS VLSLAWGFIA DVDLESEKFR RLGEMRFTLG ACLRLVALRT ENSP00000313681/1-470 HTASGLRLFS VLSLAWGFIA DVDLESEKYR RLGEMRFTLG TFLRLAALRT ENSTTRP00000015089/1-473 QTASGQRLFS VLSLAWGFIA DVDLESEKFR RLGEMRFTLG TFLRLAALRT bmy_13778T0/1-477 QMASGQRLFS VLSLAWGFIA DVDLESEKFR RLGEMRFTLG TFLRLAALRT BACU020380/1-476 QTASGQRLFS VLSLAWGFIA DVDLESEKFR RLGEMRFTLG TFLRLAALRT 301 350 ENSBTAP00000011212/1-460 YRGSLAYLPA ETLASRRGPS PA---LAPQD PADTHVVP-E QPVPPHWTVV ENSP00000313681/1-470 YRGRLAYLPV GRVGSKTPAS PV---VVQQG PVDAHLVPLE EPVPSHWTVV ENSTTRP00000015089/1-473 YQGSLAYLPV ETVVSKMPPC PARDQQAQQG PVDAHLVPLE EAVPSHWTVV bmy_13778T0/1-477 YQGSLAYLPV ETVVSKMPPC PARDQQAQQG PVDAHLVPLE EAVPSHWTVV BACU020380/1-476 YQGSLAYLPV ETVVSKMPPC PARAQQAQQG PVDAHLVPLE EAVPSHWTVV 351 400 ENSBTAP00000011212/1-460 PEQDFVLVLA LLHSHLASDL FTAPMGRCSA GAMHLFYVRA GVSRAMLLRL ENSP00000313681/1-470 PDEDFVLVLA LLHSHLGSEM FAAPMGRCAA GVMHLFYVRA GVSRAMLLRL ENSTTRP00000015089/1-473 PEQDFVLVLA LLHSHLGSEM FAAPMGRCAA GAMHLFYVRA GVSRATLLRL bmy_13778T0/1-477 PEQDFVLVLA LLHSHLGSEM FAAPMGRCAA GAMHLFYVRA GVSRATLLRL BACU020380/1-476 PEQDFVLVLA LLHSHLGSEM FAAPMGRCAA GAMHLFYVRA GVSRATLLRL 401 450 ENSBTAP00000011212/1-460 FLAMEKGRHM ECHCPHLVYV PVVAFRLEPK DGKGVFTVDG ELLISEAVQG ENSP00000313681/1-470 FLAMEKGRHM EYECPYLVYV PVVAFRLEPK DGKGVFAVDG ELMVSEAVQG ENSTTRP00000015089/1-473 FLAMEKGRHM ECDCPHLVYV PVVAFRLEPK DRKGVFAVDG ELMISEAVQG bmy_13778T0/1-477 FLAMEKGRHM AYDCPHLVYV PVVAFRLEPK DRKGVFAVDG ELMISEAVQG BACU020380/1-476 FLAMEKGRHM ACDCPHLVYV PVVAFRLEPK DRKGVFAVDG ELMISEAVQG 451 500 ENSBTAP00000011212/1-460 QVLPNYFWMV SGYREPPPSL KPQPSPRRKS QQTLPPSERP ENSP00000313681/1-470 QVHPNYFWMV SGCVEPPPSW K----PQQMP ----PPEEPL ENSTTRP00000015089/1-473 QVHPNYFWMV SGCRESPPSH R----PHRRP ----PPAEHL bmy_13778T0/1-477 QVHPNYFWMV SGCRESPPSL EPQASPSRRP ----PPAEHL BACU020380/1-476 QVHPNYFWMV SGCRESP--- -----PSRRP ----PPAEHL