KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:18 2014 Check: 00 .. Name: ENSBTAP00000011217/1-717 Len: 717 Check: 925 Weight: 1.00 Name: ENSP00000364742/1-717 Len: 717 Check: 1717 Weight: 1.00 Name: BACU005685/1-534 Len: 717 Check: 8148 Weight: 1.00 Name: bmy_08222T0/1-383 Len: 717 Check: 6918 Weight: 1.00 Name: ENSTTRP00000016474/1-717 Len: 717 Check: 3764 Weight: 1.00 // 1 50 ENSBTAP00000011217/1-717 MASSSDSEDD SFMAVDQEET VLEGTMEQDE EPRAALEVVE MQHNRSMSEL ENSP00000364742/1-717 MASSSDSEDD SFMAVDQEET VLEGTMDQDE EPHPVLEAEE TRHNRSMSEL BACU005685/1-534 ---------- ---------- ---------- ---------- ---------- bmy_08222T0/1-383 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016474/1-717 MASSSDSEDD SFMAVDQEET VLEGTMEQDE EPRPVLEVEE TRHNRSMSEL 51 100 ENSBTAP00000011217/1-717 PEEVLEYILS FLSPYQEHKT AALVCKQWYR LIKGVAHQCY HGFIKAVQEG ENSP00000364742/1-717 PEEVLEYILS FLSPYQEHKT AALVCKQWYR LIKGVAHQCY HGFMKAVQEG BACU005685/1-534 ---------- ---------- ---------- ---------- ---------- bmy_08222T0/1-383 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016474/1-717 PEEVLEYILS FLSPYQEHKT AALVCKQWYR LIKGVAHQCY HGFIKAVQEG 101 150 ENSBTAP00000011217/1-717 NIQWESRTYP YPGTPITQRF SHSACYYDAN QSMYVFGGCT QSSCNAAFND ENSP00000364742/1-717 NIQWESRTYP YPGTPITQRF SHSACYYDAN QSMYVFGGCT QSSCNAAFND BACU005685/1-534 MLTWCSGKY- ---------- -LSKLFFLTS DSCY------ ---------- bmy_08222T0/1-383 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016474/1-717 NIQWESRTYP YPGTPITQRF SHSACYYDAN QSMYVFGGCT QSSCNAAFND 151 200 ENSBTAP00000011217/1-717 LWRLDLNSKE WIRPLASGSY PSPKAGATLV VYKDLLVLFG GWTRPSPYPL ENSP00000364742/1-717 LWRLDLNSKE WIRPLASGSY PSPKAGATLV VYKDLLVLFG GWTRPSPYPL BACU005685/1-534 ---------- ------QGSY PSPKAGATLV VYKDLLVLFG GWTRPSPYPL bmy_08222T0/1-383 ---------- ---------- ---------- ---------- --------MI ENSTTRP00000016474/1-717 LWRLDLNSKE WIRPLASGSY PSPKAGATLV VYKDLLVLFG GWTRPSPYPL 201 250 ENSBTAP00000011217/1-717 HQPERFFDEI HTYSPSKNWW NCIVTTHGPP PMAGHSSCVI DDKMIVFGGS ENSP00000364742/1-717 HQPERFFDEI HTYSPSKNWW NCIVTTHGPP PMAGHSSCVI DDKMIVFGGS BACU005685/1-534 HQPERFFDEI HTYSPSKNWW NCIVTTHGPP PMAGHSSCVI DDKMIVFGGS bmy_08222T0/1-383 RTEHRFF--- ---------- ---------- ---------- -----VF--- ENSTTRP00000016474/1-717 HQPERFFDEI HTYSPSKNWW NCIVTTHGPP PMAGHSSCVI DDKMIVFGGS 251 300 ENSBTAP00000011217/1-717 LGSRQMSSDV WVLDLEQWAW SKPSISGPSP HPRGGQSQIV IDDATILILG ENSP00000364742/1-717 LGSRQMSNDV WVLDLEQWAW SKPNISGPSP HPRGGQSQIV IDDATILILG BACU005685/1-534 LGSRQMSNDV WVLDLEQWAW SKPNISGPSP HPRGGQSQIV IDDATILILG bmy_08222T0/1-383 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016474/1-717 LGSRQMSNDV WVLDLEQWAW SKPNISGPSP HPRGGQSQIV IDDATILILG 301 350 ENSBTAP00000011217/1-717 GCGGPNALFK DAWLLHMHSG PWAWQPLKVE NEDHGAPELW CHPACRVGQC ENSP00000364742/1-717 GCGGPNALFK DAWLLHMHSG PWAWQPLKVE NEEHGAPELW CHPACRVGQC BACU005685/1-534 GCGGPNA--- ---------- ---------- ---------- ------VGQC bmy_08222T0/1-383 ---------- ---------- ---------- ---------- -----QVGQC ENSTTRP00000016474/1-717 GCGGPNALFK DAWLLHIHSG PWAWQPLKVE NEDHGAPELW CHPACRVGQC 351 400 ENSBTAP00000011217/1-717 VVVFSQAPSG RAPLSPSLNS RPSPISATPP ALVPETREYR SQSPVRSMDE ENSP00000364742/1-717 VVVFSQAPSG RAPLSPSLNS RPSPISATPP ALVPETREYR SQSPVRSMDE BACU005685/1-534 VVVFSQAPSG RAPLSPSLNS RPSPISANPP ALVPEPREYR SQSPVRSMDE bmy_08222T0/1-383 VVVFSQAPSG RAPLSPSLNS RPSPISATPP ALVPEPREYR SQSPVRSMDE ENSTTRP00000016474/1-717 VVVFSQAPSG RAPLSPSLNS RPSPISATPP ALVPEPREYR SQSPVRSMDE 401 450 ENSBTAP00000011217/1-717 APCVNGRWGT LRPRAQRQTP SGSREGSLSP ARGDGSPVLN GGSLSPGSAA ENSP00000364742/1-717 APCVNGRWGT LRPRAQRQTP SGSREGSLSP ARGDGSPILN GGSLSPGTAA BACU005685/1-534 APCVNGRWGT LRPRAQRQTP SSSREGSLSP ARGDGSPILN GGNLSPGPAA bmy_08222T0/1-383 APCVNGRWGT LRPRAQRQTP SSSREGSLSP ARGDGSPILN GGNLSPGPAA ENSTTRP00000016474/1-717 APCVNGRWGT LRPRAQRQTP SSSREGSLSP ARGDGSPILN GGNLSPGSAA 451 500 ENSBTAP00000011217/1-717 VSGSSLDSPV QAVSPSTPST TEGYDLKMGL SLAPRRGSLP DQKDLRLGSI ENSP00000364742/1-717 VGGSSLDSPV QAISPSTPSA PEGYDLKIGL SLAPRRGSLP DQKDLRLGSI BACU005685/1-534 VGGSSLDSPV QAVSPSTPST TEGYDLKMGL SLAPRRGSLP DQKDLRLGSM bmy_08222T0/1-383 VGGSSLDSPV QAVSPSTPST TEGYDLKMGL SLAPRRGSLP DQKDLRLGSM ENSTTRP00000016474/1-717 VGGSSLDSPV QAISPSTPST TEGYDLKMGL SLAPRRGSLP DQKDLRLGSM 501 550 ENSBTAP00000011217/1-717 DLNWDLKAAS SGNHVDGVGS RTAGGSLRHP PEQTNGVHTP PHVASALAGA ENSP00000364742/1-717 DLNWDLKPAS SSNPMDGMDN RTVGGSMRHP PEQTNGVHTP PHVASALAGA BACU005685/1-534 DLNWDPKPAS SGSHMDGVDN RTVGGSLRHP PEQTNGVHTP PHVASALAGA bmy_08222T0/1-383 DLNWDPKPAS SSSHMDGVDN RTVGGSLRHP PEQTNGVHTP PHVASALAGA ENSTTRP00000016474/1-717 DLNWDPKPAS SSSHMDGVDN RTVGGSLRHP PEQTNGVHTP PHVASALAGA 551 600 ENSBTAP00000011217/1-717 VSPGALRRSL EAIKAMSSKG PPASAALSPP LGSSPGSPGS QNLGSGEAVP ENSP00000364742/1-717 VSPGALRRSL EAIKAMSSKG PSASAALSPP LGSSPGSPGS QSLSSGETVP BACU005685/1-534 VSPGALRRSL EAIKAMSSKG PTASAALSPP LGSSPGSPGS QNLSSGETVP bmy_08222T0/1-383 VSPGALRRSL EAIKAMSSKG PPASAALSPP LGSSPGSPGS QNLSSGETVP ENSTTRP00000016474/1-717 VSPGALRRSL EAIKAMSSKG PPASAALSPP LGSSPGSPGS QNLSSGETVP 601 650 ENSBTAP00000011217/1-717 VPRPGPAQGD GHALPPIARR LGHHPPQSLN VGKPLYQSMN CKPMQMYVLD ENSP00000364742/1-717 IPRPGPAQGD GHSLPPIARR LGHHPPQSLN VGKPLYQSMN CKPMQMYVLD BACU005685/1-534 VPRPGPAQGD GHSLPPIARR LGHHPPQSLN VGKPLYQSMN CKPMQMYVLD bmy_08222T0/1-383 VPRPGPAQGD GHSLPPIARR LGHHPPQSLN VGKPLYQSMN CKPMQMYVLD ENSTTRP00000016474/1-717 VPRPGPAQGD GHSLPPIARR LGHHPPQSLN VGKPLYQSMN CKPMQMYVLD 651 700 ENSBTAP00000011217/1-717 IKDTKEKGRV KWKVFNSSSV VGPPETSLHT VVRGRGELII FGGLMDKKQN ENSP00000364742/1-717 IKDTKEKGRV KWKVFNSSSV VGPPETSLHT VVQGRGELII FGGLMDKKQN BACU005685/1-534 IKDTKEKGRV KWKVFNSSSV VGPPETSLHT VVQGRGELII FGGLMDKKQN bmy_08222T0/1-383 IKDTKEKGRV KWKVFNSSSV VGPPETSLHT VVQGRGELII FGGLMDKKQN ENSTTRP00000016474/1-717 IKDTKEKGRV KWKVFNSSSV VGPPETSLHT VVQGRGELII FGGLMDKKQN 701 750 ENSBTAP00000011217/1-717 VKYYPKTNAL YFVRAKR ENSP00000364742/1-717 VKYYPKTNAL YFVRAKR BACU005685/1-534 VKYYPKTNAL YFVRAKR bmy_08222T0/1-383 VKYYPKTNAL YFVRAKR ENSTTRP00000016474/1-717 VKYYPKTNAL YFVRAKR