KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:18 2014 Check: 00 .. Name: ENSTTRP00000013799/1-495 Len: 502 Check: 5234 Weight: 1.00 Name: bmy_06075T0/1-502 Len: 502 Check: 4681 Weight: 1.00 Name: ENSP00000435954/1-500 Len: 502 Check: 944 Weight: 1.00 Name: ENSBTAP00000011219/1-502 Len: 502 Check: 3788 Weight: 1.00 Name: BACU013182/1-179 Len: 502 Check: 2370 Weight: 1.00 // 1 50 ENSTTRP00000013799/1-495 --LPPRGRAS PDSPLDSASL TSLDSSVFCS EGEGEPLALG DSFTVNVGGS bmy_06075T0/1-502 MELPPRGRAS PDSPVDSASL TSLDSSVFCS EGEGEPLALG DSFTVNVGGS ENSP00000435954/1-500 --MPSSGRAL LDSPLDSGSL TSLDSSVFCS EGEGEPLALG DCFTVNVGGS ENSBTAP00000011219/1-502 MELPPRGRAP PDSSLDSASL TSLDSSVFCS EGEGEPLALG DSFTVNVGGS BACU013182/1-179 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013799/1-495 RFVLSQQALS CFPHTRLGKL AVVVASCRRP GALTAVPSPL ELCDDANPVD bmy_06075T0/1-502 RFVLSQQALS CFPHTRLGKL AVVVASCRRP GALAAVPSPL ELCDDANPVD ENSP00000435954/1-500 RFVLSQQALS CFPHTRLGKL AVVVASYRRP GALAAVPSPL ELCDDANPVD ENSBTAP00000011219/1-502 RFVLSQQALS CFPHTRLGKL AVVVASCRRR GALAAVPSPL ELCDDANPVD BACU013182/1-179 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013799/1-495 NEYFFDRSSQ AFRYVLHYYR TGRLHVMEQL CALSFLQEIQ YWGIDELSID bmy_06075T0/1-502 NEYFFDRSSQ AFRYVLHYYR TGRLHVMEQL CALSFLQEIQ YWGIDELSID ENSP00000435954/1-500 NEYFFDRSSQ AFRYVLHYYR TGRLHVMEQL CALSFLQEIQ YWGIDELSID ENSBTAP00000011219/1-502 NEYFFDRSSQ AFRYVLHYYR TGRLHVMEQL CALSFLQEIQ YWGIDELSID BACU013182/1-179 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000013799/1-495 SCCRDRYFRR KELSETLDFK KDTEDQESQH ESEQDFSQGP CPTVRQKLWN bmy_06075T0/1-502 SCCRDRYFRR KELSETLDFK KDTEDQESQH ESEQDFSQGP CPTVRQKLWN ENSP00000435954/1-500 SCCRDRYFRR KELSETLDFK KDTEDQESQH ESEQDFSQGP CPTVRQKLWN ENSBTAP00000011219/1-502 SCCRDRYFRR KELSETLDFK KDTEDQESQH ESEQDFSQGR CPTIRQKLWN BACU013182/1-179 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000013799/1-495 ILEKPGSSTA ARIFGVISII FVAVSIVNMA LMSAELSWLD LQLLEIL-YV bmy_06075T0/1-502 ILEKPGSSTA ARIFGVISII FVAVSIVNMA LMSAELSWLD LQLLEILEYV ENSP00000435954/1-500 ILEKPGSSTA ARIFGVISII FVVVSIINMA LMSAELSWLD LQLLEILEYV ENSBTAP00000011219/1-502 ILEKPGSCTA ARIFGVISII FVAVSIVNMA LMSAELSWLD PQLLEILEYV BACU013182/1-179 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000013799/1-495 CISWFTGEFV LRFLCVRDRC RFLRKVPNII DLLAILPFYI TLLVESLS-S bmy_06075T0/1-502 CISWFTGEFV LRFLCVRDRC RFLRKVPNII DLLAILPFYI TLLVESLSGS ENSP00000435954/1-500 CISWFTGEFV LRFLCVRDRC RFLRKVPNII DLLAILPFYI TLLVESLSGS ENSBTAP00000011219/1-502 CISWFTGEFV LRFLCVRDRC RFLRKVPNII DLLAILPFYI TLLVESLSGS BACU013182/1-179 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000013799/1-495 QTTQELENVG RIVQVL-LPR ALRMLKL--H STGLRSLGMT ITQCYEEVGL bmy_06075T0/1-502 QTTQELENVG RIVQVLRLLR ALRMLKLGRH STGLRSLGMT ITQCYEEVGL ENSP00000435954/1-500 QTTQELENVG RIVQVLRLLR ALRMLKLGRH STGLRSLGMT ITQCYEEVGL ENSBTAP00000011219/1-502 QTTQELENVG RIVQVLRLLR ALRMLKLGRH STGLRSLGMT ITQCYEEVGL BACU013182/1-179 ---------- ---------- ---MLKLGRH STGLRSLGMT ITQCYEEVGL 351 400 ENSTTRP00000013799/1-495 LLLFLSVGIS IFSTVEYFAE QSIPDTTFTS VPCAWWWATT SMTTVGYGDI bmy_06075T0/1-502 LLLFLSVGIS IFSTVEYFAE QSIPDTTFTS VPCAWWWATT SMTTVGYGDI ENSP00000435954/1-500 LLLFLSVGIS IFSTVEYFAE QSIPDTTFTS VPCAWWWATT SMTTVGYGDI ENSBTAP00000011219/1-502 LLLFLSVGIS IFSTVEYFAE QSIPDTTFTS VPCAWWWATT SMTTVGYGDI BACU013182/1-179 LLLFLSVGIS IFSTVEYFAE QSIPDTTFTS VPCAWWWATT SMTTVGYGDI 401 450 ENSTTRP00000013799/1-495 RPDTTTGKIV AFMCILSGIL VLALPIAIIN DRFSACYFTL KLKEAAVRQR bmy_06075T0/1-502 RPDTTTGKIV AFMCILSGIL VLALPIAIIN DRFSACYFTL KLKEAAVRQR ENSP00000435954/1-500 RPDTTTGKIV AFMCILSGIL VLALPIAIIN DRFSACYFTL KLKEAAVRQR ENSBTAP00000011219/1-502 RPDTTTGKIV AFMCILSGIL VLALPIAIIN DRFSACYFTL KLKEAAVRQR BACU013182/1-179 RPDTTTGKIV AFMCILSGIL VLALPIAIIN DRFSACYFTL KLKEAAVRQR 451 500 ENSTTRP00000013799/1-495 EALKKLTKNI ATDSYISVNL RDVYARSIME MLRLKGRERA STRSSGGDDF bmy_06075T0/1-502 EALKKLTKNI ATDSYISVNL RDVYARSIME MLRLKGRERA STRSSGGDDF ENSP00000435954/1-500 EALKKLTKNI ATDSYISVNL RDVYARSIME MLRLKGRERA STRSSGGDDF ENSBTAP00000011219/1-502 EALKKLTKNI ATDSYISVNL RDVYARSIME MLRLKGRERA STRSSGGDDF BACU013182/1-179 EALKKLTKNI ATDSYISVNL RDVYARSIME MLRLKGRERA STRSSAGDDF 501 550 ENSTTRP00000013799/1-495 WF bmy_06075T0/1-502 WF ENSP00000435954/1-500 WF ENSBTAP00000011219/1-502 WF BACU013182/1-179 WF