KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:21 2014 Check: 00 .. Name: bmy_21290T0/1-319 Len: 520 Check: 4466 Weight: 1.00 Name: ENSBTAP00000011246/1-503 Len: 520 Check: 9744 Weight: 1.00 Name: ENSP00000317382/1-504 Len: 520 Check: 2690 Weight: 1.00 Name: BACU001964/1-452 Len: 520 Check: 3857 Weight: 1.00 Name: ENSTTRP00000006444/1-503 Len: 520 Check: 8712 Weight: 1.00 // 1 50 bmy_21290T0/1-319 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011246/1-503 MEAAA-PAAA EAAGREELDM DVMRPLINEQ NFDGTSDEEQ EQELLPVQKH ENSP00000317382/1-504 MEAAATPAAA GAARREELDM DVMRPLINEQ NFDGTSDEEH EQELLPVQKH BACU001964/1-452 MEAAA-PAAA EAAGHEELDM DVMRPLINEQ NFDGTSDEEH EQELLPVQKH ENSTTRP00000006444/1-503 MEAAA-PAAA EAAGHEELDM DIMRPLINEQ NFDGTSDEEH EQELLPVQKR 51 100 bmy_21290T0/1-319 ------MSLT F--------- ---------- ---------- ---------- ENSBTAP00000011246/1-503 HQLDDQEGIS FVQTLIHLLK GNIGTGLLGL PLAIKNAGIV LGPISLVFIG ENSP00000317382/1-504 YQLDDQEGIS FVQTLMHLLK GNIGTGLLGL PLAIKNAGIV LGPISLVFIG BACU001964/1-452 YQLDDQEGIS FVQTLMHLLK GNIGTGLLGL PLAIKNAGIV KDP------- ENSTTRP00000006444/1-503 YQLDGQEGIS FVQTLMHLLK GNIGTGLLGL PLAIKNAGIV LGPISLVFIG 101 150 bmy_21290T0/1-319 ---------- ---------R FKRSTLGYSD TVSFXMEVSP WSCLQKQAAW ENSBTAP00000011246/1-503 IISVHCMHIL VRCSHFLCQR FKKSTLGYSD TVSFAMEVSP WSCLQKQTAW ENSP00000317382/1-504 IISVHCMHIL VRCSHFLCLR FKKSTLGYSD TVSFAMEVSP WSCLQKQAAW BACU001964/1-452 ---------- ---------- --KSVFDFS- ---------- ---------- ENSTTRP00000006444/1-503 IISVHCMHIL VRCSHFLCQR FKRSTLGYSD TVSFAMEVSP WSCLQKQAAW 151 200 bmy_21290T0/1-319 GRSVVDFFLV ITQLGFCSVY IVFLAENVKQ VSIFLQFLRS FSSDAIVHEG ENSBTAP00000011246/1-503 GRNVVDFFLV ITQLGFCSVY IVFLAENVKQ ---------- ------VHEG ENSP00000317382/1-504 GRSVVDFFLV ITQLGFCSVY IVFLAENVKQ ---------- ------VHEG BACU001964/1-452 -RSVVDFFLV ITQLGFCSVY IVFLAENVKQ ---------- ------VHEG ENSTTRP00000006444/1-503 GRSVVDFFLV ITQLGFCSVY IVFLAENVKQ ---------- ------VHEG 201 250 bmy_21290T0/1-319 FLESKVFVLN STNSSDPCER RTIDLRIYML CFLPFLILLV FIRELKNLCV ENSBTAP00000011246/1-503 FLESKVFVLN STNSSSPCER RSIDLRIYML CFLPFLILLV FIRELKNLFV ENSP00000317382/1-504 FLESKVFISN STNSSNPCER RSVDLRIYML CFLPFIILLV FIRELKNLFV BACU001964/1-452 FLESKVFVLN STNSSDPCER RTIDLRIYML CFLPFLILLV FIRELKNLFV ENSTTRP00000006444/1-503 FLESKVFVLN STNSSDPCER RTIDLRIYML CFLPFLILLV FIRELKNLFV 251 300 bmy_21290T0/1-319 LSFLANVSMA VSLVIIYQYI VRNMPDPHNL PIVAGWKKYP LFFGTAVFAF ENSBTAP00000011246/1-503 LSFLANISMA VSLVIIYQYV VRNMPDLHNL PIVAGWKKYP LFFGTAVFAF ENSP00000317382/1-504 LSFLANVSMA VSLVIIYQYV VRNMPDPHNL PIVAGWKKYP LFFGTAVFAF BACU001964/1-452 LSFLANVSMA VSLVIIYQYI VRNMPDPHNL PIVAGWKKYP LFFGTAVFAF ENSTTRP00000006444/1-503 LSFLANVSMA VSLVIIYQYI VRNMPDPHNL PVVAGWKKYP LFFGTAVFAF 301 350 bmy_21290T0/1-319 EGIGVRLVFG ---------- -------GLK KILAVITMQT CYLIY--EME ENSBTAP00000011246/1-503 EGIGVVLPLE NQMKESKRFP QALNIGMGIV TALYVSLATL GYMCFHDDIK ENSP00000317382/1-504 EGIGVVLPLE NQMKESKRFP QALNIGMGIV TTLYVTLATL GYMCFHDEIK BACU001964/1-452 EGIGVVLPLE NQMKESKRFT QALNIGMGIV TTLYVTLATL GYMCFHDEIK ENSTTRP00000006444/1-503 EGIGVVLPLE NQMKESKRFT QALNIGMGIV TTLYVTLATL GYMCFHDEIK 351 400 bmy_21290T0/1-319 G--------- ---------- ---------- ---------- ---------- ENSBTAP00000011246/1-503 GSITLNLPQD VWLYQSVKIL YSFGIFVTYS IQFYVPAEII IPVITSRFHA ENSP00000317382/1-504 GSITLNLPQD VWLYQSVKIL YSFGIFVTYS IQFYVPAEII IPGITSKFHT BACU001964/1-452 GSITLNLPQD VWLYQSVKIL YSFGIFVTYS IQFYVPAEIV IPVITSKFHA ENSTTRP00000006444/1-503 GSITLNLPQD VWLYQSVKIL YSFGIFVTYS IQFYVPAEII IPVITSRFPA 401 450 bmy_21290T0/1-319 ---------- ---------A GAILIPRLDI VISFVGAVSS STLALILPPL ENSBTAP00000011246/1-503 KWKQIYEFAI RSFLVTITCA GAILIPRLDI VIAFVGAVSS STLALILPPL ENSP00000317382/1-504 KWKQICEFGI RSFLVSITCA GAILIPRLDI VISFVGAVSS STLALILPPL BACU001964/1-452 KWKQICEFAI RSFLVTITCA GAILIPRLDI VISFVGAVSS STLALILPPL ENSTTRP00000006444/1-503 KWKQICEFAI RSFLVTITCA GAILIPRLDI VISFVGAVSS STLALILPPL 451 500 bmy_21290T0/1-319 VEILTFSKEH YNIWMILKNI SIAFTGVVGF LLGTYVTVEE IIYPTPKVFA ENSBTAP00000011246/1-503 VEILTFSKEH YSIWMVLKNV SIVFTGVVGF LLGTYVTVEE IIYPTPRAIT ENSP00000317382/1-504 VEILTFSKEH YNIWMVLKNI SIAFTGVVGF LLGTYITVEE IIYPTPKVVA BACU001964/1-452 VEILTFSKEH YNIWMILKNI SIAFTGVVGF LLGTYVTVEE IIYPTPKVFA ENSTTRP00000006444/1-503 VEILTFSKEH YSIWMILKNI SIAFTGVVGF LLGAYVTVEE IIYPTVKVFT 501 550 bmy_21290T0/1-319 GTPRSSSLNL NSTCFTSGLK ENSBTAP00000011246/1-503 STPHGPSLNL NSTCFTSGLK ENSP00000317382/1-504 GTPQSPFLNL NSTCLTSGLK BACU001964/1-452 GTPQSSSLNV NSTCFTSGLK ENSTTRP00000006444/1-503 GTPQSSSLNL NSTCITSGLK