KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:23 2014 Check: 00 .. Name: bmy_07397T0/1-226 Len: 226 Check: 9677 Weight: 1.00 Name: ENSP00000344352/1-181 Len: 226 Check: 7100 Weight: 1.00 Name: ENSBTAP00000011265/1-181 Len: 226 Check: 7672 Weight: 1.00 Name: ENSTTRP00000013175/1-179 Len: 226 Check: 6211 Weight: 1.00 Name: BACU011099/1-181 Len: 226 Check: 7323 Weight: 1.00 // 1 50 bmy_07397T0/1-226 MMLQHPGQVS ASEVSASAIV PCLSPPGSLV FEDFANLTPF VKEELRFAIQ ENSP00000344352/1-181 MMLQHPGQVS ASEVSASAIV PCLSPPGSLV FEDFANLTPF VKEELRFAIQ ENSBTAP00000011265/1-181 MMLQHPGQVS ASEVSASAFV PCLSPPGSLV FEDFANLTPF VKEELRLAIQ ENSTTRP00000013175/1-179 MMLQHPGQVS ASEVSASAIV PCLSPPGSLV FEDFANLTPF VKEELRFAIQ BACU011099/1-181 MMLQHPGQVS ASEVSASAIV PCLSPPGSLV FEDFANLTPF VKEELRFAIQ 51 100 bmy_07397T0/1-226 SKHLCHRMSS ALESDAVEVV GCRGRKESIL EGYLEGSPEE EVAPEEDERK ENSP00000344352/1-181 NKHLCHRMSS ALES-----V TVSDRPLGV- -----SITKA EVAPEEDERK ENSBTAP00000011265/1-181 SKHLCHRMSS ALDS-----V TVSGRPLEM- -----SVTKA EVAPEEDERK ENSTTRP00000013175/1-179 SKHLCHRMSS ALES-----V TASSRPLEM- -----SVTKA EVAPEEDERK BACU011099/1-181 SKHLCHRMSS ALES-----V TISGRPLEM- -----SVTKA EVAPEEDERK 101 150 bmy_07397T0/1-226 KRRRERNKIA AAKCRNKKKE KTECLQKPFS LVHPIVCAPS CIQPAPLPEG ENSP00000344352/1-181 KRRRERNKIA AAKCRNKKKE KTECLQK--- ---------- ---------- ENSBTAP00000011265/1-181 KRRRERNKIA AAKCRNKKKE KTECLQK--- ---------- ---------- ENSTTRP00000013175/1-179 KRRRERNKIA AAKCRNKKKE KTECLQK--- ---------- ---------- BACU011099/1-181 KRRRERNKIA AAKCRNKKKE KTECLQK--- ---------- ---------- 151 200 bmy_07397T0/1-226 RSTSGNGICG QESEKLESVN AELKAQIEEL KNEKQHLIYM LNLHRPTCIV ENSP00000344352/1-181 ---------- -ESEKLESVN AELKAQIEEL KNEKQHLIYM LNLHRPTCIV ENSBTAP00000011265/1-181 ---------- -ESEKLESVN AELKAQIEEL KNEKQHLIYM LNLHRPTCIV ENSTTRP00000013175/1-179 ---------- -ESEKLESVN AELKAQIEEL KNEKQHLIYM LNLHRPTCIV BACU011099/1-181 ---------- -ESEKLESVN AELKAQIEEL KNEKQHLIYM LNLHRPTCIV 201 250 bmy_07397T0/1-226 RAQNGRTPED ERNLFIQQIK EGTLQS ENSP00000344352/1-181 RAQNGRTPED ERNLFIQQIK EGTLQS ENSBTAP00000011265/1-181 RAQNGRTPED ERNLFIQQIK EGTLQS ENSTTRP00000013175/1-179 RAQNGRTPED ERN-FIQQIK EGT-QS BACU011099/1-181 RAQNGRTPED ERNLFIQQIK EGTLQS