KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:24 2014 Check: 00 .. Name: ENSBTAP00000011270/1-515 Len: 681 Check: 2791 Weight: 1.00 Name: ENSP00000238823/1-518 Len: 681 Check: 3583 Weight: 1.00 Name: bmy_19505T0/1-638 Len: 681 Check: 7922 Weight: 1.00 Name: ENSTTRP00000007581/1-518 Len: 681 Check: 3873 Weight: 1.00 Name: BACU014595/1-522 Len: 681 Check: 6754 Weight: 1.00 // 1 50 ENSBTAP00000011270/1-515 ---------- ---------- ---------- -----MECDL METDILESLE ENSP00000238823/1-518 ---------- ---------- ---------- -----MECDL METDILESLE bmy_19505T0/1-638 QLSIWKFRGG SACASLRVTG EEGSLTTRKF EYHSSMECDL METDILESLE ENSTTRP00000007581/1-518 ---------- ---------- ---------- -----MECDL METDILESLE BACU014595/1-522 ---------- ---------- ---------- -----MECDL METDILESLE 51 100 ENSBTAP00000011270/1-515 DLGYKGPLLE DGALSQAVTA GASSPEFTKL CAWLVSELRV LCKLEENVQA ENSP00000238823/1-518 DLGYKGPLLE DGALSQAVSA GASSPEFTKL CAWLVSELRV LCKLEENVQA bmy_19505T0/1-638 DLGYKGPLLE DGALSQAVSA GASSPEFTKL CAWLVSELRV LCKLDENVQA ENSTTRP00000007581/1-518 DLGYKGPLLE DGALSQAVSA GASSPEFTKL CAWLVSELRV LCKLDENVQA BACU014595/1-522 DLGYKGPLLE DGALSQAVSA GASSPEFTKL CAWLVSELRV LCKLDENVQA 101 150 ENSBTAP00000011270/1-515 TN-------- ---------- ---------- ---------- ---------- ENSP00000238823/1-518 TN-------- ---------- ---------- ---------- ---------- bmy_19505T0/1-638 TNKISTSFDA VKEAKAWNLM LHNLVPSYHR GRKSVSVAGP GEGFIKEQDH ENSTTRP00000007581/1-518 TN-------- ---------- ---------- ---------- ---------- BACU014595/1-522 TN-------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000011270/1-515 ---------- ---------- ---------- ---------- ---------- ENSP00000238823/1-518 ---------- ---------- ---------- ---------- ---------- bmy_19505T0/1-638 WALMDRWGLI EEERVEGISI TRSHLSEDAS RNETDHSWDS EETGLAQIEG ENSTTRP00000007581/1-518 ---------- ---------- ---------- ---------- ---------- BACU014595/1-522 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000011270/1-515 ------SPSE AEEFQLEVSG LLGEMNCPYL SLTSGDVTKR LLIQKNCLLL ENSP00000238823/1-518 ------SPSE AEEFQLEVSG LLGEMNCPYL SLTSGDVTKR LLIQKNCLLL bmy_19505T0/1-638 MFVKVVGPSE AEEFQLEVSG LLGEMNCPYL SLTSGDVTKR LLIQKNCLLL ENSTTRP00000007581/1-518 ------SPSE AEEFQLEVSG LLGEMNCPYL SLTSGDVTKR LLIQKNCLLL BACU014595/1-522 ------SPSE AEEFQLEVSG LLGEMNCPYL SLTSGDVTKR LLIQKNCLLL 251 300 ENSBTAP00000011270/1-515 L--------- -------TYL ISELEAARML CVNTLPKKAQ EGGGSEVFQE ENSP00000238823/1-518 L--------- -------TYL ISELEAARML CVNAPPKKAQ EGGGSEVFQE bmy_19505T0/1-638 LNYLSFGRTS LYVTSFAAYL ISELEAARML CVNTPPKKAQ EGGGSEVFQE ENSTTRP00000007581/1-518 L--------- -------TYL ISELEAARML CVNTLPKKAQ EGGGSEVFQE BACU014595/1-522 L--------- -------TYL ISELEAARML CVNTPPKKAQ EGGGSEVFQE 301 350 ENSBTAP00000011270/1-515 LKGICIALGM SKPPANITMF QFFSGIE-KK LKETLAKVPP NHVGKPLLKK ENSP00000238823/1-518 LKGICIALGM SKPPANITMF QFFSGIE-KK LKETLAKVPP NHVGKPLLKK bmy_19505T0/1-638 LKGICIALGM SKPPANITMF QFFSGIE-KK LKETLAKVPP NHVGKPLLKK ENSTTRP00000007581/1-518 LKGICIALGM SKPPANITMF QFFSGIEKKK LKETLAKVPP NHVGKPLLKK BACU014595/1-522 LKGICIALGM SKPPANITMF QFFSGIE-KK LKETLAKVPP NHVGKPLLKK 351 400 ENSBTAP00000011270/1-515 PMGPAHWEKI EAINQAVANE YEVRRKLLIK RLDVTVQSFG WSDRAKSQTE ENSP00000238823/1-518 PMGPAHWEKI EAINQAIANE YEVRRKLLIK RLDVTVQSFG WSDRAKSQTE bmy_19505T0/1-638 PMGPAHW--- ---------- ---------- ---------- ------SQTE ENSTTRP00000007581/1-518 PMGPAHWEKI EAINQAVANE YEVRRKLLIK RLDVTVQSFG WSDRAKSQTE BACU014595/1-522 PMGPAHWEKI EAINQAVANE YEVRRKLLIK RLDVTVQSFG WSDRAKSQTE 401 450 ENSBTAP00000011270/1-515 KLAKVYQPKR SVLSPK-TIS VAHLLAARQD LSKIFRTSSG SI-EKTACAI ENSP00000238823/1-518 KLAKVYQPKR SVLSPKTTIS VAHLLAARQD LSKILRTSSG SIREKTACAI bmy_19505T0/1-638 KLAKVYQPKR SVLSPKSTIS VAHLLAARQD LSKILRTSSG SIREKTACAI ENSTTRP00000007581/1-518 KLAKVYQPKR SVLSPKSTIS VAHLLAARQD LSKILRTSSG SIREKTACAI BACU014595/1-522 KLAKVYQPKR SVLSPKSTIS VAHLLAARQD LSKILRTSSG SIREKTACAI 451 500 ENSBTAP00000011270/1-515 NKVLMGRVPD RGGRPNEIEP PPPEMPPWQK RQDGPQQPAG GRGGGRGGYE ENSP00000238823/1-518 NKVLMGRVPD RGGRPNEIEP PPPEMPPWQK RQDGPQQQTG GRGGGRGGYE bmy_19505T0/1-638 NKVLMGRVPD RGGRPNEIEP PPPEMPPWQK RQDGPQQPAG GRGAGRGGYE ENSTTRP00000007581/1-518 NKVLMGRVPD RGGRPNEIEP PPPEMPPWQK RQDGTQQPAG GRGAGRGGYE BACU014595/1-522 NKVLMGRVPD RGGRPNEIEP PPPEMPPWQK RQDGPQQPAG GRGAGRGGYE 501 550 ENSBTAP00000011270/1-515 HSSYGGRGGH EQQTGGRGG- ----RGGYDH GGRGGGRGNK HQGGWTDGGS ENSP00000238823/1-518 HSSYGGRGGH E-QGGGRGG- ----RGGYDH GGRGGGRGNK HQGGWTDGGS bmy_19505T0/1-638 HSSYGGRGGH E-QGGGRGGR GGYDRGGYDH GGRGGGRGNK HQGGWTDGGS ENSTTRP00000007581/1-518 HASYGGRGGH E-QGGGRGG- ----RGGYDH GGRGGGRGNK HQGGWTDGGS BACU014595/1-522 HSSYGGRGGH E-QGGGRGGR GGYDRGGYDH GGRGGGRGNK HQGGWTDGGS 551 600 ENSBTAP00000011270/1-515 GGGGGYQDGG YRDSGFQPSG YHGGH-SGGY QGGGYGGFQT -TTYTGSGYQ ENSP00000238823/1-518 GGGGGYQDGG YRDSGFQPGG YHGGHSSGGY QGGGYGGFQT SSSYTGSGYQ bmy_19505T0/1-638 GGGGGYQDGG YRDSGFQPGG YHGGH-SGGY QGGGYGGFQT -STYTGSGYQ ENSTTRP00000007581/1-518 GGGGGYQDGS YRDSGFQPGG YHGGH-SGGY QGGGYGGFQT -STYTGSGYQ BACU014595/1-522 GGGGGYQDGS YRDSGFQPGG YHGGH-SGGY QGGGYGGFQT -STYTGSGYQ 601 650 ENSBTAP00000011270/1-515 GGGYQQDNRY QDGGHHGDRG GGRGGRGSRG GRG-GRAGQG GGWGGRGSQN ENSP00000238823/1-518 GGGYQQDNRY QDGGHHGDRG GGRGGRGGRG GRG-GRAGQG GGWGGRGSQN bmy_19505T0/1-638 GGGYQQDNRY QDGGHHGDRG SGRGGRGGRG GRGGGRAGQG GGWGGRGSQN ENSTTRP00000007581/1-518 GGGYQQDSRY QDGGHHGDRG SGRGGRGGRG GRGGGRAGQG GGWGGRGSQN BACU014595/1-522 GGGYQQDNRY QDGGHHGDRG SGRGGRGGRG GRGGGRAGQG GGWGGRGSQN 651 700 ENSBTAP00000011270/1-515 YHQGGQFEQH FQHGGYQYNH SGFGQGRHYT S ENSP00000238823/1-518 YHQGGQFEQH FQHGGYQYNH SGFGQGRHYT S bmy_19505T0/1-638 YHQGGQFEQH FQHGGYQYNH SGFGQGRHYT S ENSTTRP00000007581/1-518 YHQGGQFEQH FQHGGYQYNH SGFGQGRHYT S BACU014595/1-522 YHQGGQFEQH FQHGGYQYNH SGFGQGRHYT S