KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:43:27 2014 Check: 00 .. Name: ENSBTAP00000011314/1-520 Len: 584 Check: 9997 Weight: 1.00 Name: bmy_08206T0/1-482 Len: 584 Check: 3461 Weight: 1.00 Name: BACU019876/1-427 Len: 584 Check: 3367 Weight: 1.00 Name: ENSTTRP00000011308/1-426 Len: 584 Check: 552 Weight: 1.00 // 1 50 ENSBTAP00000011314/1-520 MPRKKAAAAW EEPSSGNGTA RAGPRKRGGP AGRKRERPER CSSSSGGGSS bmy_08206T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU019876/1-427 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011308/1-426 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000011314/1-520 GDEDGLELDG APGGGKRAAR PAATKAGGAA AVITEPEHTK ERVKLEGSKC bmy_08206T0/1-482 ---------- ---------- ---------- ---------- ------MPRK BACU019876/1-427 ---------- ---------- ---------- ---------- ---KLEGSKC ENSTTRP00000011308/1-426 ---------- ---------- ---------- ---------- ---KLEGSKC 101 150 ENSBTAP00000011314/1-520 KGQLLIFGAT NWD------- --LIGRKEVP KQQAAYRNLG QNLWGPHRYG bmy_08206T0/1-482 KA------AA AWEEPSSGNG TARAGPRKRG GPAAAYRNLG QNLWGPHRYG BACU019876/1-427 KGQLLIFGAT NWD------- --LIGRKEVP KQQAAYRNLG QNLWGPHRYG ENSTTRP00000011308/1-426 KGQLLIFGAT NWD------- --LIGRKEVP KQQAAYRNLG QNLWGPHRYG 151 200 ENSBTAP00000011314/1-520 CLSGVRVRTV VSGSCAAHSL LITTEGKLWS WG-------- ---------- bmy_08206T0/1-482 CLSGVRVRTV VSGSCAAHSL LITTEGKLWS WGFGLYVTPD FSESSLGSLF BACU019876/1-427 CLSGVRVRTV VSGSCAAHSL LITTEGKLWS WG-------- ---------- ENSTTRP00000011308/1-426 CLSGVRVRTV VSGSCAAHSL LITTEGKLWS -G-------- ---------- 201 250 ENSBTAP00000011314/1-520 ---------- ---------- ---------- -------RNE KGQLGHGDTK bmy_08206T0/1-482 PNVLTDSGSD IENKDVSREQ TRRCTGDEPV GVLRVHRRNE KGQLGHGDTK BACU019876/1-427 ---------- ---------- ---------- -------RNE KGQLGHGDTK ENSTTRP00000011308/1-426 ---------- ---------- ---------- -------RNE KGQLGHGDTK 251 300 ENSBTAP00000011314/1-520 RVEAPRLVEG LSHEVIVSAA CGRNHTLALT ETGSVFAFGE NKMGQLGLGN bmy_08206T0/1-482 RVEAPRLIEG LSHEVIVSAA CGRNHTLALT ETGSVFAFGE NKMGQLGLGN BACU019876/1-427 RVEAPRLIEG LSHEVIVSAA CGRNHTLALT ETGSVFAFGE NKMGQLGLGN ENSTTRP00000011308/1-426 RVEAPRLIEG LSHEVIVSAA CGRNHTLALT ETGSVFAFGE NKMGQLGLGN 301 350 ENSBTAP00000011314/1-520 QTDAVPSPAQ IMYNGQPITK MACGAEFSMI MDCKGNLYSF GCPEYGQLGH bmy_08206T0/1-482 QTDAVPSPAQ IMYNGQPITK MACGAEFSMI MDCKGNLYSF GCPEYGQLGH BACU019876/1-427 QTDAVPSPAQ IMYNGQPITK MACGAEFSMI MDCKGNLYSF GCPEYGQLGH ENSTTRP00000011308/1-426 QTDAVPSPAQ IMYNGQPITK MACGAEFSMI MDCKGNLYSF GCPEYGQLGH 351 400 ENSBTAP00000011314/1-520 NSDGKFIARA QRIEYDCELV PRRVAIFIEK TKDGQILPVP NVVVRDVACG bmy_08206T0/1-482 NSDGKFIARA QRIEYDCELV PRRVAIFIEK TKDGQILPVP NVVVRDVACG BACU019876/1-427 NSDGKFIARA QRIEYDCELV PRRVAIFIEK TKDGQILPVP NVVVRDVACG ENSTTRP00000011308/1-426 NSDGKFIARA QRIEYDCELV PRRVAIFIEK TKDGQILPVP NVVVRDVACG 401 450 ENSBTAP00000011314/1-520 ANHTLVLDSQ KRVFSWGFGG YGRLGHAEQK DEMVPRLVKL FDFPGRGASQ bmy_08206T0/1-482 ANHTLVLDSQ KRVFSWGFGG YGRLGHAEQR DEMVPRLVKL FDFPGRGASH BACU019876/1-427 ANHTLVLDSQ KRVFSWGFGG YGRLGHAEQK DEMVPRLVKL FDFPGRGASQ ENSTTRP00000011308/1-426 ANHTLVLDSQ KRVFSWGFGG YGRLGHAEQK DEMVPRLVKL FDFPGRGASQ 451 500 ENSBTAP00000011314/1-520 IYAGYTCSFA VSEVGGLFFW GATNTSREST MYPKAVQDLC GWRIRSLACG bmy_08206T0/1-482 IYAGYTCSFA VSEVGGLFFW GATNTSREST MYPKAVQDLC GWRIRSLACG BACU019876/1-427 IYAGYTCSFA VSEVGGLFFW GATNTSREST MYPKAVQDLC GWRIRSLACG ENSTTRP00000011308/1-426 IYAGYTCSFA VSEVGGLFFW GATNTSREST MYPKAVQDLC GWRIRSLACG 501 550 ENSBTAP00000011314/1-520 KSSIIVAADE STISWGPSPT FGELGYGDHK PKSSTAAQEV KTLDGIFTEQ bmy_08206T0/1-482 KSSIIVAADE STISWGPSPT FGELGYGDHK PKSSTAAQEV KTLDGIFTEQ BACU019876/1-427 KSSIIVAADE STISWGPSPT FGELGYGDHK PKSSTAAQEV KTLDGIFTEQ ENSTTRP00000011308/1-426 KSSIIVAADE STISWGPSPT FGELGYGDHK PKSSTAAQEV KTLDGIFTEQ 551 600 ENSBTAP00000011314/1-520 VAMGYSHSLV IARDESEAEK EKIRKLPEYN PRTL bmy_08206T0/1-482 VAMGYSHSLV IARDESETEK EKIKKLPEYN PRTL BACU019876/1-427 VAMGYSHSLV IARDESETEK EKIKKLPEYN PRTL ENSTTRP00000011308/1-426 VAMGYSHSLV IARDESETEK EKIKKLPEYN PRTL