KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:43:27 2014 Check: 00 .. Name: ENSP00000328182/1-286 Len: 366 Check: 5700 Weight: 1.00 Name: ENSBTAP00000011319/1-200 Len: 366 Check: 747 Weight: 1.00 Name: bmy_19860T0/1-360 Len: 366 Check: 6556 Weight: 1.00 Name: BACU013289/1-187 Len: 366 Check: 8570 Weight: 1.00 // 1 50 ENSP00000328182/1-286 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011319/1-200 ---------- ---------- ---------- ---------- ---------- bmy_19860T0/1-360 MFSCSVFVSL NTRKQEEKSC QHPFCDSVSV VLEQPCVPAP FSQQRVKALF BACU013289/1-187 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000328182/1-286 ---------- ---------- ---------- MNPASDGGTS ESIFDLDYAS ENSBTAP00000011319/1-200 ---------- ---------- ---------- -MSLLGAGA- ---LDLDYTS bmy_19860T0/1-360 FVQVEDGRMR VPGPWPGAAC GPRRSLCDVS SMSLPSSGPA ASLFDLDCTS BACU013289/1-187 ---------- ---------- ---------- -MSLPSSGPA GSIFDLDCTS 101 150 ENSP00000328182/1-286 WGIRSTLMVA GFVFYLGVFV VCHQLSSSLN ATYRSLVARE KVFWDLAATR ENSBTAP00000011319/1-200 GRVRGVLVAA GCAFYLGVFV VCHRLSSSLN ATYRSLAARE QVFWNLAATR bmy_19860T0/1-360 GQVRWALVAA GCAFYLGVFV ACHQLSSSLN ATYRSLGARE QVFWNLAATR BACU013289/1-187 GQVRWALVAA GCAFYLGVFV ACHQLSSSLN ATYRSLGARE QVFWNLAATR 151 200 ENSP00000328182/1-286 AVFGVQSTAA GLWALLGDPV LHADKARGQQ NWCWFHITTA TGFFCFENVA ENSBTAP00000011319/1-200 AVFGIQGTAA GLWALLLDPV LQADKALGQQ DWCWFHITTA TGFFFFENLA bmy_19860T0/1-360 AVFGIQGTAA GLRALLLDPV LEADKVLGQQ NWCWFHIATA TGFFLFENLA BACU013289/1-187 AVFGIQGTAA GLRALLLDPV LQADKVLGQQ NWCWFHIATA TGFFLFENLA 201 250 ENSP00000328182/1-286 VHLSNLIFRT FDLFLVIHHL FAFLGFLGCL VNLQAGHYLA MTTLLLEMST ENSBTAP00000011319/1-200 LHVSNALFHT FDGFLAVHHL FAFLGFLGSA VNLQAGHYLP MVTLLLEMST bmy_19860T0/1-360 LHVSNVLFHT FDGFLAVHHL FAFLGFLGSV VNLQAGHYLP MITLLLEMST BACU013289/1-187 LHVSNALFRT FDGFLAVHHL FAFLGFLGSV VNLQAGHYLP MITLLLEMST 251 300 ENSP00000328182/1-286 PFTCVSWMLL KAGWSESLFW KLNQWLMIHM FHCRMVLTYH MWWVCFWHWD ENSBTAP00000011319/1-200 PFTCISWMLL KAGCANSRLW RLNQWAMVHL FHCRM----- ---------- bmy_19860T0/1-360 PFTCISWMLL KAGCADSLLW RLNQWLMVHL FHCRMVLTYH MWWVCLGHWD BACU013289/1-187 PFTCISWMLL KG------LW ---------- ------LQYQ ---------- 301 350 ENSP00000328182/1-286 GLVSSLYLPH LTLFLVGLAL LTLIINPYWT HKKTQQLLNP VDWNFAQPEA ENSBTAP00000011319/1-200 ---------- ---------- ---------- ---------- ---------- bmy_19860T0/1-360 ALARSLFPPH WALFVVGLGL LTVLINPYWT RKKTQQLLNP VDWNFAPGRP BACU013289/1-187 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000328182/1-286 KSRPEGNGQL LRKKRP ENSBTAP00000011319/1-200 ---------- ------ bmy_19860T0/1-360 ------NGPA PPKKTR BACU013289/1-187 ---------- ------