KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:29 2014 Check: 00 .. Name: ENSP00000401060/1-831 Len: 834 Check: 6673 Weight: 1.00 Name: ENSTTRP00000001299/1-832 Len: 834 Check: 1766 Weight: 1.00 Name: ENSBTAP00000011340/1-833 Len: 834 Check: 6046 Weight: 1.00 Name: bmy_17147T0/1-834 Len: 834 Check: 4926 Weight: 1.00 Name: BACU002220/1-834 Len: 834 Check: 4245 Weight: 1.00 // 1 50 ENSP00000401060/1-831 -MPLEMEPKM SKLAFGCQRS STSDDDSGCA LEEYAWVPPG LRPEQIQLYF ENSTTRP00000001299/1-832 --PLEMEPKM SKLAFGCQRS STSDDDSGCA LEEYAWVPPG LRPEQIQLYF ENSBTAP00000011340/1-833 -MPLEMEPKM SKLAFGCQRS STSDDDSGCA LEEYAWVPPG LRPEQIQLYF bmy_17147T0/1-834 MMPLEMEPKM SKLAFGCQRS STSDDDSGCA LEEYAWVPPG LRPEQIQLYF BACU002220/1-834 MMPLEMEPKM SKLAFGCQRS STSDDDSGCA LEEYAWVPPG LRPEQIQLYF 51 100 ENSP00000401060/1-831 ACLPEEKVPY VNSPGEKHRI KQLLYQLPPH DNEVRYCQSL SEEEKKELQV ENSTTRP00000001299/1-832 ACLPEEKVPY VNSPGEKHRI KQLLYQLPPH DNEVRYCQTL SEEEKKELQV ENSBTAP00000011340/1-833 ACLPEEKVPY VNSPGEKHRI KQLLYQLPPH DNEVRYCQTL SEEEKKELQV bmy_17147T0/1-834 ACLPEEKVPY VNSPGEKHRI KQLLYQLPPH DNEVRYCQTL SEEEEKELQV BACU002220/1-834 ACLPEEKVPY VNSPGEKHRI KQLLYQLPPH DNEVRYCQTL SEEEEKELQV 101 150 ENSP00000401060/1-831 FSAQRKKEAL GRGTIKLLSR AVMHAVCEQC GLKINGGEVA VFASRAGPGV ENSTTRP00000001299/1-832 FSAQRKKEAL GRGTIKLLSR AVMHAVCEQC GLKINGGEIA VFASRAGPGV ENSBTAP00000011340/1-833 FSAQRKKEAL GRGTIKLLSR AVMHAVCEQC GLKINGGEIA VFASRAGPGV bmy_17147T0/1-834 FSAQRKKEAL GRGTIKLLSR AAMHAVCEQC GLKINGGEIA VFASRAGPGV BACU002220/1-834 FSAQRKKEAL GRGTIKLLSR ASMHAVCEQC GLKINGGEIA VFASRAGPGV 151 200 ENSP00000401060/1-831 CWHPSCFVCF TCNELLVDLI YFYQDGKIHC GRHHAELLKP RCSACDEIIF ENSTTRP00000001299/1-832 CWHPSCFVCC TCNELLVDLI YFYQDGKIHC GRHHAELLKP RCSACDEIIF ENSBTAP00000011340/1-833 CWHPSCFVCF TCSELLVDLI YFYQDGKIHC GRHHAELLKP RCSACDEIIF bmy_17147T0/1-834 CWHPSCFVCF TCNELLVDLI YFYQDGKIHC GRHHAELLKP RCSACDEIIF BACU002220/1-834 CWHPSCFVCF TCSELLVDLI YFYQDGKIHC GRHHAELLKP RCSACDEIIF 201 250 ENSP00000401060/1-831 ADECTEAEGR HWHMKHFCCL ECETVLGGQR YIMKDGRPFC CGCFESLYAE ENSTTRP00000001299/1-832 ADECTEAEGR HWHMKHFCCL ECEMVLGGQR YIMKDGRPFC CGCFESLYAE ENSBTAP00000011340/1-833 ADECTEAEGR HWHMKHFCCL ECETVLGGQR YIMKDGRPFC CGCFESLYAE bmy_17147T0/1-834 ADECTEAEGR HWHMKHFCCL ECETVLGGQR YIMKDGRPFC CGCFESLYAE BACU002220/1-834 ADECTEAEGR HWHMKHFCCL ECETVLGGQR YIMKDGRPFC CGCFESLYAE 251 300 ENSP00000401060/1-831 YCETCGEHIG VDHAQMTYDG QHWHATEACF SCAQCKASLL GCPFLPKQGQ ENSTTRP00000001299/1-832 YCETCGEHIG VDHAQMTYDG RHWHATEACF SCAQCKTSLL GCPFLPKQGQ ENSBTAP00000011340/1-833 YCETCGEHIG VDHAQMTYDG QHWHATEACF SCAQCKTSLL GCPFLPKQGQ bmy_17147T0/1-834 YCETCGEHIG VDHAQMTYDG QHWHATEACF SCAQCKASLL GCPFLPKQGQ BACU002220/1-834 YCETCGEHIG VDHAQMTYDG QHWHATEACF SCAQCKASLL GCPFLPKQGQ 301 350 ENSP00000401060/1-831 IYCSKTCSLG EDVHASDSSD SAFQSARSRD SRRSVRMGKS SRSADQCRQS ENSTTRP00000001299/1-832 IYCSKTCSLG EDVHASDSSD SAFQSARSRD SRRSVRMGKS SRSADQCRQS ENSBTAP00000011340/1-833 IYCSKTCSLG EDVHASDSSD SAFQSARSRD SRRSVRMGKS SRSADQCRQS bmy_17147T0/1-834 IYCSKTCSLG EDVHASDSSD SAFQSARSRD SRRSVRMGKS SRSADQCRQS BACU002220/1-834 IYCSKTCSLG EDVHASDSSD SAFQSARSRD SRRSVRMGKS SRSADQCRQS 351 400 ENSP00000401060/1-831 LLLSPALNYK FPGLSGNADD TLSRKLDDLS LSRQGTSFAS EEFWKGRVEQ ENSTTRP00000001299/1-832 LLLSPALNYK FPGLSGNADD TLSRKLDDLS LSRQGASFVN EEFWKGRVEH ENSBTAP00000011340/1-833 LLLSPALNYK FPGLSGNADD TLSRKLDDLS LSRQGANFVS EEFWKGRVEH bmy_17147T0/1-834 LLLSPALNYK FPGLSGNADD TLSRKLDDLS LSRQGAGFVN EEFWKGRVEH BACU002220/1-834 LLLSPALNYK FPGLSGNADD TLSRKLDDMS LSRQGAGFVN EEFWKGRVEH 401 450 ENSP00000401060/1-831 ETPEDPEEWA DHEDYMTQLL LKFGDKSLFQ PQPNEMDIRA SEHWISDNMV ENSTTRP00000001299/1-832 ETPEDPEEWA EHEDYMTQLL LKFGDKSLFQ QQPNEMDIRA SEHWISDNMV ENSBTAP00000011340/1-833 ETPEDPEEWA EHEDYMTQLL LKFGDKSLFQ QQPSEMDIRA SEHWIADNMV bmy_17147T0/1-834 ETPEDPEEWA EHEDYMTQLL LKFGDKSLFQ QQPNEMDIRA SEHWISDNMV BACU002220/1-834 ETPEDPEEWA EHEDYMTQLL LKFGDKSLFQ QQPNEMDIRA SEHWISDNMV 451 500 ENSP00000401060/1-831 KSKTELKQNN QSLASKKYQS DMYWAQSQDG LGDSAYGSHP GPASSRRLQE ENSTTRP00000001299/1-832 KNKTELKQNN QSLASKKYQS DMYWAQSQDG LGDSAYGSHP GPASSRRLQE ENSBTAP00000011340/1-833 KNKTELKQNN QSLASKKYQS DMYWAQSQDG LGDSAYGSHP GPASSRRLQE bmy_17147T0/1-834 KNKTELKQNN QSLASKKYQS DMYWAQSQDG LGDSAYGSHP GPASSRRLQE BACU002220/1-834 KNKTELKQNN QSLASKKYQS DMYWAQSQDG LGDSAYGSHP GPASSRRLQE 501 550 ENSP00000401060/1-831 LELDHGASGY NHDETQWYED SLECLSDLKP EQSVRDSMDS LALSNITGAS ENSTTRP00000001299/1-832 LDLDHGASGY NHDQTQWYED SLECLSDLKP EQSVRDSMDS LALSNITGAS ENSBTAP00000011340/1-833 LDLDHGASGY NHDQTQWYED SLECLSDLKP EQSVRDSMDS LALSNITGAS bmy_17147T0/1-834 LDLDHGASGY SHDQTQWYED SLECLSDLKP EQSVRDSMDS LALSNITGAS BACU002220/1-834 LDLDHGASGY SHDQTQWYED SLECLSDLKP EQSVRDSMDS LALSNITGAS 551 600 ENSP00000401060/1-831 VDGENKPRPS LYSLQNFEEM ETEDCEKMSN MGTLNSSMLH RSAESLKSLS ENSTTRP00000001299/1-832 VDGESKPRPS LYSLQNFEEI EAEDCEKMSN MGTLNSSMLH RSTESLKSLS ENSBTAP00000011340/1-833 VDGESKPRPS LYSLQNFEEI ETEDCEKMSN MGTLNSSMLH RSTESLKSLS bmy_17147T0/1-834 VDGESKPRPS LYSLQNFEEI EAEDCEKMSN MGTLNSSMLH RSTESLKSLS BACU002220/1-834 VDGESKPRPS LYSLQNFEEI EAEDCEKMSN MGTLNSSMLH RSTESLKSLS 601 650 ENSP00000401060/1-831 SELCPEKILP EEKPVHLPVL RRSKSQSRPQ QVKFSDDVID NGNYD-IEIR ENSTTRP00000001299/1-832 SELCPEKILP EEKPVHLPVL RRSKSQSRPQ QVKFSDDVID NGSYENIEIR ENSBTAP00000011340/1-833 SELCPEKVLP EEKPVHLPVL RRSKSQSRPQ QVKFSDDVID NGSYENIEIR bmy_17147T0/1-834 SELCPEKVLP EEKPVHLPVL RRSKSQSRPQ QVKFSDDVID NGSYENIEIR BACU002220/1-834 SELCPEKVLP EEKPVHLPVL RRSKSQSRPQ QVKFSDDVID NGSYENIEIR 651 700 ENSP00000401060/1-831 QPPMSERTRR RVYNFEERGS RSHHHRRRRS RKSRSDNALN LVTERKYSPK ENSTTRP00000001299/1-832 QPPMSERTRR RVYHFEERGP RSHHHRRRRS RKSRSDNALN LVTERKYSPK ENSBTAP00000011340/1-833 QPPMSERTRR RVYHFEERGP RSHYHRRRRS RKSRSDNALN LVTERKYNTK bmy_17147T0/1-834 QPPMSERTRR RVYHFEERGP RSHHHRRRRS RKSRSDNALN LVTERKYSPK BACU002220/1-834 QPPMSERTRR RVYHFEERGP RSHHHRRRRS RKSRSDNALN LVTERKYSPK 701 750 ENSP00000401060/1-831 DRLRLYTPDN YEKFIQNKSA REIQAYIQNA DLYGQYAHAT SDYGLQNPGM ENSTTRP00000001299/1-832 DRLRLYAPDN YEKFIQSKSA REIQAYVRNA ELYGQYARAA SSYTLRSPGG ENSBTAP00000011340/1-833 DRLRLYTPDN YEKFIQNKSA REIQAYIQNA DLYGQYTHAT SDYALQNPGG bmy_17147T0/1-834 DRLWLYAPDN YEKFIQSKSA REIQAYIQNA DLYGRYTHAT SDYTLQKPGG BACU002220/1-834 DRLRLYAPDN YEKFIQSKSA REIQAYIQNA DLYGRYAHAT SDYTLQKPGG 751 800 ENSP00000401060/1-831 NRFLGLYGED DDSWCSSS-S SSSDSEEEGY FLGQPIPQPR PQRFAYYTDD ENSTTRP00000001299/1-832 PRFLGLHGED DSSWCSSTTS SSSDSEEEGY FLGQPIPQPR PQRYAYYTDD ENSBTAP00000011340/1-833 PRFLGLYGED DDSWCSSSTS SSSDSEEEGY FLGQPIPQPR PQRYAYYTDD bmy_17147T0/1-834 PRFLGLYGED DDSWCSSSTS SSSDSEEEGY FLGQPIPQPR PQRYAYYTDD BACU002220/1-834 PRFLGLYGED DDSWCSSSTS SSSDSEEEGY FLGQPIPQPR PQRYAYYTDD 801 850 ENSP00000401060/1-831 LSSPPSALPT PQFGQRTTKS KKKKGHKGKN CIIS ENSTTRP00000001299/1-832 LSSPTSALPT PQFGQRTTKS KKKKGHKGKN CIIS ENSBTAP00000011340/1-833 LSSPTSALPT PQFGQRTTKS KKKKGHKGKN CIIS bmy_17147T0/1-834 LSSPTSALPT PQFGQRTTKS KKKKGHKGKN CIIS BACU002220/1-834 LSSPTSALPT PQFGQRTTKS KKKKGHKGKN CIIS