KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:30 2014 Check: 00 .. Name: ENSP00000357750/1-565 Len: 574 Check: 3062 Weight: 1.00 Name: ENSBTAP00000011347/1-563 Len: 574 Check: 7759 Weight: 1.00 Name: ENSTTRP00000013793/1-572 Len: 574 Check: 4706 Weight: 1.00 Name: bmy_10369T0/1-574 Len: 574 Check: 2006 Weight: 1.00 Name: BACU014225/1-565 Len: 574 Check: 5975 Weight: 1.00 // 1 50 ENSP00000357750/1-565 ---------M NRSIPVEVDE SEPYPSQLLK PIPEYSPEEE SEPPAPNIRN ENSBTAP00000011347/1-563 ---------M NRSIPVEVDE SEPYPSQLLK PLSEYSLAEE SELAAPDARN ENSTTRP00000013793/1-572 -TPPLQETRM IRSIPVEVDE SEPYPSQLLK PLSEYSLEEE SELPAPDTRD bmy_10369T0/1-574 MFSLVPETRM SRSIPVEVDE SEPYPSQLLK PLSEYFLEEE SELPALDTRN BACU014225/1-565 ---------M SRSIPVEVDE SEPYPSQLLK PLSEYSLEEE SELPALNTRN 51 100 ENSP00000357750/1-565 MAPNSLSAPT MLHNSSGDFS QAHSTLKLAN HQRPVSRQVT CLRTQVLEDS ENSBTAP00000011347/1-563 MVPNNLSASP TAQSSSRDFP QAHLPLQLSN LQQPVSPRVT CLRAKVLAES ENSTTRP00000013793/1-572 MAPNSLSAPQ TLHSSSGDFS HTHPTLKLSN -RQPVSQQVT CLRTKVLAES bmy_10369T0/1-574 MAPNSLSAPQ TPHSSSGDFS HAHPTLKLSN HQQPVSQQVT CLRTKVLAES BACU014225/1-565 MVPNSLSAPQ TPHSSSGDFS HAHPTLKLSN HQQPVSQQVT CLRTKVLAES 101 150 ENSP00000357750/1-565 EDSFCRRHPG LGKAFPSGCS AVSEPASESV VGALPAEHQF SFMEKRNQWL ENSBTAP00000011347/1-563 EDSLWRRHMD PSKDFTSGSC AAGEPETQSV AGALPQEHQF SIMEKHNQWL ENSTTRP00000013793/1-572 EDSFWRRHPD PGKDFPLGCS AASEPEAESV VGALTPEHQF SLMEKRNQWL bmy_10369T0/1-574 EDSFWRRHPD PGKDXPLGCS AASEPEAESV AGALPPEHQF SLMEKRNQWL BACU014225/1-565 EDSFWRRHPD PGKDFPLGCS AASEPEAESV AGALPPEHQF SLMEKRNQWL 151 200 ENSP00000357750/1-565 VSQLSAASPD TGHDSDKSDQ SLPNASADSL GGSQEMVQRP QPHRNRAGLD ENSBTAP00000011347/1-563 GSWLSATSPD TGHDSDKSDQ SVPNASADPQ SGSQEMVPRP L--RNRAAPD ENSTTRP00000013793/1-572 GSQLSAASPD TGHDSDKSDQ SLPNASADPP GSSQEMVPRA RIHRNRAAPD bmy_10369T0/1-574 GSQLSAASPD PGHDSDKSDQ SLPNASADPP GSSQEMVPRA XTHRNRAAPD BACU014225/1-565 GSRLSAASPD PGHDSDKSDQ SLPNASADPP GSSQEMVPRA RTHRNRAAPD 201 250 ENSP00000357750/1-565 LPTIDTGYDS QPQDVLGIRQ LERPLPLTSV CYPQDLPRPL RSREFPQFEP ENSBTAP00000011347/1-563 PPTIDTGYDS QPQDVLGIRQ LERPLPLTSV CYLQDLPRPL RSREFHQCEP ENSTTRP00000013793/1-572 LRTIDTGYDS QPQDVLGIRQ LERPLPLTSV CYPQDLPRPL RSREFHQLEP bmy_10369T0/1-574 LRTIDTGYDS QPQDVLGIRQ LERPLPLTSV CYPQDLPRPL RSREFHQFEP BACU014225/1-565 LCTIDTGYDS QPQDVLGIRQ LERPLPLTSV CYPQDLPRPL RSREFHQFEP 251 300 ENSP00000357750/1-565 QRYPACAQML PPNLSPHAPW NYHYHCPGSP DHQVPYGHDY PRAAYQQVIQ ENSBTAP00000011347/1-563 QRYPACAQML PPEPSMQAQW NYHYYCPGDP DHQVPYGHNY PRAAYQQVIQ ENSTTRP00000013793/1-572 QRYPACAQML PPNPSPQAQW NYRYYCPGGP DHLVPYGHDY PRTAYQQVIQ bmy_10369T0/1-574 QRYPACAQML PPSSSPQAQW NYHYYCPGGP DHLVPYGHDY PRAAYQQVIQ BACU014225/1-565 QRYPACAQML PPSSSPQAQW NYHYYCPGGP DHLVPYGHDY PRAAYQQVIQ 301 350 ENSP00000357750/1-565 PALPGQPLPG ASVRGLHPVQ KVILNYPSPW DHEERPAQRD CSFPGLPRHQ ENSBTAP00000011347/1-563 PALPGQAPPG AHVRGLHPVQ KVILSCPSPW DQEERPPQRN YSPPGLPRYQ ENSTTRP00000013793/1-572 PALPGQAPPG ASVRGLHPVQ KVVLNYPSPW DQEERPPQRD CSSLGLLRYQ bmy_10369T0/1-574 PALPGQAPPG ASVRGLHPVQ KVVLNYPSPW DQEERPPQRD YSSLGLLRYQ BACU014225/1-565 PALPGQAPPG ASVRGLHPVQ KVILNYPSPW DQEERPPQRD YSSLGLLRYQ 351 400 ENSP00000357750/1-565 DQPHHQPPNR AGAPGESLEC PAELRPQVPQ PPSPAAVPRP PSNPPARGTL ENSBTAP00000011347/1-563 DQLYNQPPNR GGAPEGSLEC PAELRPQDPQ APSPAAVPRP PSHPLARGTL ENSTTRP00000013793/1-572 GRLYNQPPHR AGAPEGSLEC PAELRPEGPQ TPSPAAIPRP PSNPPARGTL bmy_10369T0/1-574 DRLYNQPPHR AGAPEESLEC PAELRPQGPQ TPSPAAIPRP PRNPPARGTL BACU014225/1-565 DRLYNQPPHR AGVPEESLEC PAELRPQGPQ TPSPAAIPRP PSNPPARGTL 401 450 ENSP00000357750/1-565 KTSNLPEELR KVFITYSMDT AMEVVKFVNF LLVNGFQTAI DIFEDRIRGI ENSBTAP00000011347/1-563 KTSNLPEELR KVFITYSMDT AMEVVKFVNF LLVNGFQTAI DIFEDRIRGI ENSTTRP00000013793/1-572 KTSNLPEELR KVFITYSMDT AMEVVKFVNF LLVNGFQTAX XXXXXXXXXX bmy_10369T0/1-574 KTSNLPEELR KVFITYSMDT AMEVVKFVNF LLVNGFQTAI DIFEDRIRGI BACU014225/1-565 KTSNLPEELR KVFITYSMDT AMEVVKFVNF LLVNGFQTAI DIFEDRIRGI 451 500 ENSP00000357750/1-565 DIIKWMERYL RDKTVMIIVA ISPKYKQDVE GAESQLDEDE HGLHTKYIHR ENSBTAP00000011347/1-563 DIIKWMERYL RDKTVMIIVA ISPKYKQDVE GAESQLDEDE HGLHTKYIHR ENSTTRP00000013793/1-572 XXXXXXXXXX XXKTVMIIVA ISPKYKQDVE GAESQLDEDE HGLHTKYIHR bmy_10369T0/1-574 DIIKWMERYL RDKTVMIIVA ISPKYKQDVE GAESQLDEDE HGLHTKYIHR BACU014225/1-565 DIIKWMERYL RDKTVMIIVA ISPKYKQDVE GAESQLDEDE HGLHTKYIHR 501 550 ENSP00000357750/1-565 MMQIEFIKQG SMNFRFIPVL FPNAKKEHVP TWLQNTHVYS WPKNKKNILL ENSBTAP00000011347/1-563 MMQIEFIKQG SMNFRFIPVL FPNAKKEHVP TWLQNTHIYS WPKNKKNILL ENSTTRP00000013793/1-572 MMQIEFIKQG SMNFRFIPVL FPNAKKEHVP TWLQNTHVYS WPKNKKNILL bmy_10369T0/1-574 MMQIEFIKQG SMNFRFIPVL FPNAKKEHVP TWLQNTHIYS WPKNKKNILL BACU014225/1-565 MMQIEFIKQG SMNFRFIPVL FPSAKKEHVP TWLQNTHIYS WPKNKKNILL 551 600 ENSP00000357750/1-565 RLLREEEYVA PPRGPLPTLQ VVPL ENSBTAP00000011347/1-563 RLLREEEYVA PPRGPLPTLQ VVPL ENSTTRP00000013793/1-572 RLLREEEYVA PPRGPLPTLQ VVPL bmy_10369T0/1-574 RLLREEEYVA PPRGPLPTLQ VVPL BACU014225/1-565 RLLREEEYVA PPRGPLPTLQ VVPL