KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:32 2014 Check: 00 .. Name: ENSTTRP00000002446/1-472 Len: 517 Check: 1144 Weight: 1.00 Name: ENSP00000367991/1-483 Len: 517 Check: 5105 Weight: 1.00 Name: ENSBTAP00000011359/1-442 Len: 517 Check: 2618 Weight: 1.00 Name: BACU013069/1-437 Len: 517 Check: 1040 Weight: 1.00 Name: bmy_17660T0/1-398 Len: 517 Check: 9062 Weight: 1.00 // 1 50 ENSTTRP00000002446/1-472 ---------- NAEPEPRSLS LGGHVGFDSL PDQLVSKSVT QGFSFNILCV ENSP00000367991/1-483 MAATDLERFS NAEPEPRSLS LGGHVGFDSL PDQLVSKSVT QGFSFNILCV ENSBTAP00000011359/1-442 MAATDLERFS NAEPEPRSLS LGGHVGFDSL PDQLVSKSVT QGFSFNILCV BACU013069/1-437 ---------- --MALARTQG SGGQ------ --QKTNAHVT TGKP------ bmy_17660T0/1-398 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000002446/1-472 GETGIGKSTL MNTLFNTTFE TEEASHHEEC VRLRPQTYDL QESNVQLKLT ENSP00000367991/1-483 GETGIGKSTL MNTLFNTTFE TEEASHHEAC VRLRPQTYDL QESNVQLKLT ENSBTAP00000011359/1-442 GETGIGKSTL MNTLFNTTFE TEEASHHEEC VRLRPQTYDL QESNVQLKLT BACU013069/1-437 GETGIGKSTL MNTLFNTTFE TEEASHHEEC VRLRPQTYDL QESNVQLKLT bmy_17660T0/1-398 ---------- MNTLFNTTFE TEEASHHEEC VRLRPQTYDL QESNVQLKLT 101 150 ENSTTRP00000002446/1-472 IVDAVGFGDQ INKDESY--- ---------- ---------- ---------- ENSP00000367991/1-483 IVDAVGFGDQ INKDESY--- ---------- ---------- ---------- ENSBTAP00000011359/1-442 IVDAVGFGDQ INKDESY--- ---------- ---------- ---------- BACU013069/1-437 IVDAVGFGDQ INKDERQAAG RAARLVSSPS LYVGRGSNSL SECSALPAAP bmy_17660T0/1-398 IVDAVGFGDQ INKDESY--- ---------- ---------- ---------- 151 200 ENSTTRP00000002446/1-472 -RPIVDYIDA QFENYLQEEL KIRRSLFDYH DTRIHVCLYF I-PXXXXXXX ENSP00000367991/1-483 -RPIVDYIDA QFENYLQEEL KIRRSLFDYH DTRIHVCLYF ITPTGHSLKS ENSBTAP00000011359/1-442 -RPIVDYIDA QFENYLQEEL KIRRSLFDYH DTRIHVCLYF ITPTGHSLKS BACU013069/1-437 DKPIVDYIDA QFENYLQEEL KIRRSLFDYH DTRIHVCLYF ITPTGHSLKS bmy_17660T0/1-398 -RPIVDYIDA QFENYLQEEL KIRRSLFDYH DTRIHVCLYF ITPTGHSLKS 201 250 ENSTTRP00000002446/1-472 XXXXXXXXXX XXVNIIPIIA KADTISKSEL HKFKIKIMGE LVSNGVQIYQ ENSP00000367991/1-483 LDLVTMKKLD SKVNIIPIIA KADTISKSEL HKFKIKIMGE LVSNGVQIYQ ENSBTAP00000011359/1-442 LDLVTMKKLD SKVNIIPIIA KADTISKSEL HKFKIKIMGE LVSNGVQIYQ BACU013069/1-437 LDLVTMKKLD SKVNIIPIIA KADTISKSEL HKFKIKIMGE LVSNGVQIYQ bmy_17660T0/1-398 LDLVTMKKLD SKVNIIPIIA KADTISKSEL HKFKIKIMGE LVSNGVQIYQ 251 300 ENSTTRP00000002446/1-472 FPTDDEAVAE INAVMNAHLP FAVVGSTEEV KVGNKLVRAR QYPWGVVQVE ENSP00000367991/1-483 FPTDDEAVAE INAVMNAHLP FAVVGSTEEV KVGNKLVRAR QYPWGVVQVE ENSBTAP00000011359/1-442 FPTDDEAVAE INAVMNAHLP FAVVGSTEEV KVGNKLVRAR QYPWGVVQVE BACU013069/1-437 FPTDDETVAE INAVMNAHLP FAVVGSTEEV KVGNKLVRAR QYPWGVVQVE bmy_17660T0/1-398 FPTDDEAVAE INAVMNAHLP FAVVGSTEEV KVGNKLVRAR QYPWGVVQVE 301 350 ENSTTRP00000002446/1-472 NENHCDFVKL REMLIRVNME DLREQTHSRH YELYRRCKLE EMGFQDSDGD ENSP00000367991/1-483 NENHCDFVKL REMLIRVNME DLREQTHSRH YELYRRCKLE EMGFQDSDGD ENSBTAP00000011359/1-442 NENHCDFVKL REMLIRVNME DLREQTHSRH YELYRRCKLE EMGFQDSDGD BACU013069/1-437 NENHCDFVKL REMLIRVNME DLREQTHSRH YELYRRCKLE EMGFQDSDGD bmy_17660T0/1-398 NENHCDFVKL REMLIRVNME DLREQTHSRH YELYRRCKLE EMGFQDSDGD 351 400 ENSTTRP00000002446/1-472 SQPFSLQETY EAKRKEFLSE LQRKEEEMRQ MFVNKVKETE LELKEKEREL ENSP00000367991/1-483 SQPFSLQETY EAKRKEFLSE LQRKEEEMRQ MFVNKVKETE LELKEKEREL ENSBTAP00000011359/1-442 SQPFSLQETY EAKRKEFLSE LQRKEEEMRQ MFVNKVKETE LELKEKEREL BACU013069/1-437 SQPFSLQETY EAKRKEFLSE LQRKEEEMRQ MFVNKVKETE LELKEKEREL bmy_17660T0/1-398 SQPFSLQETY EAKRKEFLSE LQRKEEEMRQ MFVNKVKETE LELKEKEREL 401 450 ENSTTRP00000002446/1-472 HEKFEHLKRV HQEEKRKVEE KRRELEEETN AFNRRKAAVE ALQSQALHAT ENSP00000367991/1-483 HEKFEHLKRV HQEEKRKVEE KRRELEEETN AFNRRKAAVE ALQSQALHAT ENSBTAP00000011359/1-442 HEKFEHLKRL HQEEKRKVEE KRRELEEETN AFNRRKAAVE ALQSQALHAT BACU013069/1-437 HEKFEHLKRV HQEEKRKVEE KRRELEEETN AFNRRKAAVE ALQSQALHAT bmy_17660T0/1-398 HEKFEHLKRV HQEEKRKVEE KRRELEEETN AFNRRKAAVE ALQSQALHAT 451 500 ENSTTRP00000002446/1-472 SQQPLRKDKD KKNRSDIGVQ QSGMSLSNSK VMMTKASVEP LNCSSWWPAI ENSP00000367991/1-483 SQQPLRKDKD KKNRSDIGAH QPGMSLSSSK VMMTKASVEP LNCSSWWPAI ENSBTAP00000011359/1-442 SQQPLRKDKD KKK------- ---------- ---------- --ASGWSSIY BACU013069/1-437 SQQPLRKDKD KKK------- ---------- ---------- ---------- bmy_17660T0/1-398 SQQPLRKDKD KKKWPE---- ---------- -----HLLEP TRAKGHRYPF 501 550 ENSTTRP00000002446/1-472 QCCSCLVRDA TWREGFL ENSP00000367991/1-483 QCCSCLVRDA TWREGFL ENSBTAP00000011359/1-442 SVTIP----- ------- BACU013069/1-437 ---------- ------- bmy_17660T0/1-398 GGRVHQLKGQ N------