KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:32 2014 Check: 00 .. Name: BACU001314/1-616 Len: 681 Check: 1717 Weight: 1.00 Name: ENSP00000438042/1-415 Len: 681 Check: 807 Weight: 1.00 Name: ENSTTRP00000000345/1-478 Len: 681 Check: 3711 Weight: 1.00 Name: bmy_10650T0/1-389 Len: 681 Check: 3881 Weight: 1.00 Name: ENSBTAP00000011368/1-421 Len: 681 Check: 3367 Weight: 1.00 // 1 50 BACU001314/1-616 ---------- ---------- ---------- ---------- ---------- ENSP00000438042/1-415 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000345/1-478 MPARSRHRPR VHFGSPTRAP PPLLEASHSG EARRAPGSDS CSDADSEVGL bmy_10650T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011368/1-421 ---------- ---------- ---------- ---------- ---------- 51 100 BACU001314/1-616 ---------- ---MAFPNQL CIRRWTTKHV AVWLKDEGFF EYVDILCNKH ENSP00000438042/1-415 ---------- ---MAGPNQL CIRRWTTKHV AVWLKDEGFF EYVDILCNKH ENSTTRP00000000345/1-478 GSPTRTAEAV EEEMAFPNQL CIRRWTTKHV AVWLKDEGFF EYVDILCNKH bmy_10650T0/1-389 ---------- ---MAFPNQL CIRRWTTKQV AVWLKDEGFF EYVDILCNKH ENSBTAP00000011368/1-421 -------QTV EEEMAVPNQL CIRRWTTKHV AVWLKDEGFF EYVDVLCNKH 101 150 BACU001314/1-616 RLDGITLLTL TEYDLRSPPL EIKVLGDIKR LMLSVRKLQK IHIDVLEEMG ENSP00000438042/1-415 RLDGITLLTL TEYDLRSPPL EIKVLGDIKR LMLSVRKLQK IHIDVLEEMG ENSTTRP00000000345/1-478 RLDGITLLTL TEYDLRSPPL EIKVLGDIKR LMLSVRKLQK IHIDVLEEMG bmy_10650T0/1-389 RLDGITLLTL TEYDLRSPPL EIKVLGDIKR LMLSVRKLQK IHIDVLEEMG ENSBTAP00000011368/1-421 RLDGITLLTL TEYDLRSPPL EIKVLGDIKR LMLSVRKLQK IHIDVLEEMG 151 200 BACU001314/1-616 YNSDSPMSSM SPFISALQSA EWLCNGEPSH DCDGPITDLN SDQYQYVNGK ENSP00000438042/1-415 YNSDSPMGSM TPFISALQST DWLCNGELSH DCDGPITDLN SDQYQYMNGK ENSTTRP00000000345/1-478 YNSDSPMSSM SPFISALQNA EWLCNGEPSH DCDGPIADLN SDQYQYVNGK bmy_10650T0/1-389 YNSDSPMSSM SPFISAIQSA EWLCNGEPSH DCDGPITDLN SDQYQYVN-- ENSBTAP00000011368/1-421 YNSDSPMSPM TPFISALQSA EWLCNGEPSH DCDGPITDLN SDQYQYVNGK 201 250 BACU001314/1-616 NKHSIRRLDP EYWKTILSCI YVFIVFGFTS FIMVIVHERV PDMQTYPPLP ENSP00000438042/1-415 NKHSVRRLDP EYWKTILSCI YVFIVFGFTS FIMVIVHERV PDMQTYPPLP ENSTTRP00000000345/1-478 NKHSIRRLDP EYWKTILSCI YVFIVFGFTS FIMVIVHERV PDMQTYPPLP bmy_10650T0/1-389 ---------- ---------- ----VFGFTS FIMVIVHERV PDMQTYPPLP ENSBTAP00000011368/1-421 NKHSIRRLDP EYWKTILSCI YVFIVFGFTS FIMVIVHERV PDMQTYPPLP 251 300 BACU001314/1-616 DIFLDSVPRI PWAFAMTEVC GMILCYIWLL VLLLHKHRSI LLRRLCSLMG ENSP00000438042/1-415 DIFLDSVPRI PWAFAMTEVC GMILCYIWLL VLLLHKHRSI LLRRLCSLMG ENSTTRP00000000345/1-478 DIFLDSVPRI PWAFDMTEVC GLILCYIWLL VLLLHEHTSI LLRRLCSLMG bmy_10650T0/1-389 DIFLDSVPRI PWAFAMTEVC GMILCYIWLL VLLLHKHRSI LLRRLCSLMG ENSBTAP00000011368/1-421 DIFLDSVPRI PWAFAMTEVC GMILCYIWLL VLLLHKHRSI LLRRLCSLMG 301 350 BACU001314/1-616 TVFLLRCFTM FVTSLSVPGQ HLQCTGKVYG SVWEKLHRAF AIWSGFGMTL ENSP00000438042/1-415 TVFLLRCFTM FVTSLSVPGQ HLQCTGKIYG SVWEKLHRAF AIWSGFGMTL ENSTTRP00000000345/1-478 TVFLLRCFTM FVTSLSVPGQ HLQCTGKVYG SVWEKLHRAF AIWSGFGMTL bmy_10650T0/1-389 TVFLLRCFTM FVTSLSVPGQ HLXCTGKVYG SVWEKLHRAF AIWSGFGMTL ENSBTAP00000011368/1-421 TVFLLRCFTM FVTSLSVPGQ HLQCTGKVYG SVWEKLHRAF AIWSGFGMTL 351 400 BACU001314/1-616 TGVHTCGDYM FSGHTVVLTM LNFFVTECRR NVMIEVSLLP LPIEYLPIEL ENSP00000438042/1-415 TGVHTCGDYM FSGHTVVLTM LNFFVT---- ---------- ---EYTP--- ENSTTRP00000000345/1-478 TGVHTCGDYM FSGHTVVLTM LNFFVT---- ---------- ---EYTP--- bmy_10650T0/1-389 TGVHTCGDYM FSGHTVVLTM LNFFVT---- ---------- ---EYTP--- ENSBTAP00000011368/1-421 TGVHTCGDYM FSGHTVVLTM LNFFVT---- ---------- ---EYTP--- 401 450 BACU001314/1-616 KQINLSNLLV ERFFNFRSPL PAASPWRPTD RPAHGEFSTS GSSNTDTGKV ENSP00000438042/1-415 ---------- -RSWNFLHTL S--------- ---------- ---------- ENSTTRP00000000345/1-478 ---------- -RSWNFLHTL S--------- ---------- ---------- bmy_10650T0/1-389 ---------- -RSWNFLHTL S--------- ---------- ---------- ENSBTAP00000011368/1-421 ---------- -RSWNFLHTL S--------- ---------- ---------- 451 500 BACU001314/1-616 TGTLETKYKW C--EYGLTFT EKWNTDNTLG TEIAIEDQIC QGLKLTFDTT ENSP00000438042/1-415 ---------W VLNLFGIFFI --LAAHEHYS IDVFIAFYIT TRLFLYYHTL ENSTTRP00000000345/1-478 ---------W VLNLFGIFFI --LAAHEHYS IDVFIAFYIT TRLFLYYHTL bmy_10650T0/1-389 ---------W VLNLFGIFFI --LAAHEHYS IDVFIAFYIT TRLFLYYHTL ENSBTAP00000011368/1-421 ---------W VLNLFGIFFI --LAAHEHYS IDVFIAFYIT TRLFLYYHTL 501 550 BACU001314/1-616 FSPNTGKKSG KIKSSYKREC INLGCDVDFD FAGPAIHGSA VFGYEGWLAG ENSP00000438042/1-415 ANTRAYQQSR RARI------ ---------- ---------- ------WFPM ENSTTRP00000000345/1-478 ANTRAYQQSR RARI------ ---------- ---------- ------WFPM bmy_10650T0/1-389 ANTRAYQQSR RARI------ ---------- ---------- ------WFPM ENSBTAP00000011368/1-421 ANTRAYQQSR RARI------ ---------- ---------- ------WFPM 551 600 BACU001314/1-616 YQMTFDSAKS KLTRNNFAVG YRTGDFQLHT NVNDGTEFGG SIYQKVCEDL ENSP00000438042/1-415 FSF-FE---- ---------- ---------C NVN------G TVPNEYC--- ENSTTRP00000000345/1-478 FSF-FE---- ---------- ---------C NVN------G TVPNEYC--- bmy_10650T0/1-389 FSF-FE---- ---------- ---------C NVN------G TVPNEYC--- ENSBTAP00000011368/1-421 FSF-FE---- ---------- ---------C NVN------G TVPNEYC--- 601 650 BACU001314/1-616 DTSVNLAWTS GTNCTRFGIA AKYQLDPTAS ISAKVNNSSL IGVGYTQTLR ENSP00000438042/1-415 -------W-- ---------- ---------P FSKPAIMKRL IG-------- ENSTTRP00000000345/1-478 -------W-- ---------- ---------P FSKPAIMKRL IG-------- bmy_10650T0/1-389 -------W-- ---------- ---------P FSKPAIMKRL IG-------- ENSBTAP00000011368/1-421 -------W-- ---------- ---------P FSKPAIMKRL IG-------- 651 700 BACU001314/1-616 PGVKLTLSAL VDGKSINAGG HKLGLALELE A ENSP00000438042/1-415 ---------- ---------- ---------- - ENSTTRP00000000345/1-478 ---------- ---------- ---------- - bmy_10650T0/1-389 ---------- ---------- ---------- - ENSBTAP00000011368/1-421 ---------- ---------- ---------- -