KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:33 2014 Check: 00 .. Name: BACU008885/1-87 Len: 718 Check: 459 Weight: 1.00 Name: ENSBTAP00000011369/1-718 Len: 718 Check: 2771 Weight: 1.00 Name: ENSTTRP00000015510/1-714 Len: 718 Check: 6175 Weight: 1.00 Name: bmy_16588T0/1-585 Len: 718 Check: 1156 Weight: 1.00 Name: ENSP00000315791/1-717 Len: 718 Check: 7392 Weight: 1.00 // 1 50 BACU008885/1-87 MSGDGATEQA AEYVPEKVKK AEKKLEENPY DLDAWSILIR EAQNQPIDKA ENSBTAP00000011369/1-718 MSGDGATEQA AEYVPEKVKK AEKKLEENPY DLDAWSILIR EAQNQPIDKA ENSTTRP00000015510/1-714 MSGDGATEQA AEYVPEKVKK AEKKLEENPY DLDAWSILIR EAQNQPIDKA bmy_16588T0/1-585 ---------- ---------- ---------- ---------- ---------- ENSP00000315791/1-717 MSGDGATEQA AEYVPEKVKK AEKKLEENPY DLDAWSILIR EAQNQPIDKA 51 100 BACU008885/1-87 RKTYERLVAQ FPSSGRFWKL YIEAEV---- ---------- ---------- ENSBTAP00000011369/1-718 RKTYERLVAQ FPSSGRFWKL YIEAEIKAKN YDKVEKLFQR CLMKVLHIDL ENSTTRP00000015510/1-714 RKTYERLVAQ FPSSGRFWKL YIEAEIKAKN YDKVEKLFQR CLMKVLHIDL bmy_16588T0/1-585 ---------- ---------- ---------- ---------- --MKVLHIDL ENSP00000315791/1-717 RKTYERLVAQ FPSSGRFWKL YIEAEIKAKN YDKVEKLFQR CLMKVLHIDL 101 150 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 WKCYLSYVRE TKGKLPSYKE KMAQAYDFAL DKIGMEIMSY QIWVDYINFL ENSTTRP00000015510/1-714 WKCYLSYVRE TKGKLPSYKE KMAQAYDFAL DKIGMEIMSY QIWVDYINFL bmy_16588T0/1-585 WKCYLSYVRE TKGKLPSYKE KMAQAYDFAL DKIGMEIMSY QIWVDYINFL ENSP00000315791/1-717 WKCYLSYVRE TKGKLPSYKE KMAQAYDFAL DKIGMEIMSY QIWVDYINFL 151 200 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 KGVEAVGSYA ENQRITAVRR VYQRGCVNPM INIEQLWRDY NKYEEGINIH ENSTTRP00000015510/1-714 KGVEAVGSYA ENQRITAVRR VYQRGCVNPM INIEQLWRDY NKYEEGINIH bmy_16588T0/1-585 KGVEAVGSYA ENQRITAVRR VYQRGCVNPM INIEQLWRDY NKYEEGINIH ENSP00000315791/1-717 KGVEAVGSYA ENQRITAVRR VYQRGCVNPM INIEQLWRDY NKYEEGINIH 201 250 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 LAKKMIEDRS RDYMNARRVA KEYETVMKGL DRNAPSVPPQ NTPQEAQQVD ENSTTRP00000015510/1-714 LAKKMIEDRS RDYMNARRVA KEYETVMKGL DRNAPSVPPQ NTPQEAQQVD bmy_16588T0/1-585 LAKKMIEDRS RDYMNARRVA K--------- ---------- ---------- ENSP00000315791/1-717 LAKKMIEDRS RDYMNARRVA KEYETVMKGL DRNAPSVPPQ NTPQEAQQVD 251 300 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 MWKKYIQWEK SNPLRTEDQT LITKRVMFAY EQCLLVLGHH PDIWYEAAQY ENSTTRP00000015510/1-714 MWKKYIQWEK SNPLRTEDQT LITKRXXXXX XXXXXXXGHH PDIWYEAAQY bmy_16588T0/1-585 ------VWNS MRPL-----T IMFVVIMFAY EQCLLVLGHH PDIWYEAAQY ENSP00000315791/1-717 MWKKYIQWEK SNPLRTEDQT LITKRVMFAY EQCLLVLGHH PDIWYEAAQY 301 350 BACU008885/1-87 ---------- ---------- ---------- ---------N ILFYF----- ENSBTAP00000011369/1-718 LEQSSKLLAE KGVSVHFFPP FWSFHELKLE SYVTMNLSDP IILFYVYTYD ENSTTRP00000015510/1-714 LEQSSKLLAE KG-DMNNAKL FSDEAANIYE RAISTLLKKN MLLYFAYADY bmy_16588T0/1-585 LEQSSKLLAE KG-DMNNAKL FSDEAANIYE RAISTLLKKN MLLYFAYADY ENSP00000315791/1-717 LEQSSKLLAE KG-DMNNAKL FSDEAANIYE RAISTLLKKN MLLYFAYADY 351 400 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 ESSRMKYEKV HSIYNRLLAI EDIDPTLVYI QYMKFARRAE GIKSGRMIFK ENSTTRP00000015510/1-714 EESRMKYEKV HSIYNRLLAI EDIDPTLXXX XXXKFARRAE -IKSGRMIF- bmy_16588T0/1-585 EESRMKYEKV HSIYNRLLAI EDIDPTLVYI QYMKFARRAE GIKSGRMIFK ENSP00000315791/1-717 EESRMKYEKV HSIYNRLLAI EDIDPTLVYI QYMKFARRAE GIKSGRMIFK 401 450 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 KAREDTRTRH HVYVTAALME YYCNRDKSVA FKIFELGLKK YGDIPEYVLA ENSTTRP00000015510/1-714 KAREDTRTRH HVYVTAALME YYCSKDKSVA FKIFELGLKK YGDIPEYVLA bmy_16588T0/1-585 KAREDTRTRH HVYVTAALME YYCSKDKSVA FKIFELGLKK YGDIPEYVLA ENSP00000315791/1-717 KAREDTRTRH HVYVTAALME YYCSKDKSVA FKIFELGLKK YGDIPEYVLA 451 500 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 YIDYLSHLNE DNNTRVLFER VLTSGSLPPE KSGEIWARFL AFESNIGDLA ENSTTRP00000015510/1-714 YIDYLSHLNE DNNTRVLFER VLTSGSLPPE KSGEIWARFL AFESNIGDLA bmy_16588T0/1-585 YIDYLSHLNE DNNTRVLFER VLTSGSLPPE KSGEIWARFL AFESNIGDLA ENSP00000315791/1-717 YIDYLSHLNE DNNTRVLFER VLTSGSLPPE KSGEIWARFL AFESNIGDLA 501 550 BACU008885/1-87 ---------- ---------- ---------- FLHSF----- ---------- ENSBTAP00000011369/1-718 SILKVEKRRF TAFKEEYEGK ETALLVDRYK FMDLYPCSAS ELKALGYKDV ENSTTRP00000015510/1-714 SILKVEKRRF TAFKEEYEGK ETALLVDRYK FMDLYPCSAS ELKALGYKDV bmy_16588T0/1-585 SILKVEKRRF TAFKEEYEGK ETALLVDRYK FMDLYPCSAS ELKALGYKDV ENSP00000315791/1-717 SILKVEKRRF TAFKEEYEGK ETALLVDRYK FMDLYPCSAS ELKALGYKDV 551 600 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 SRAKLAAIIP DPVVAPSIVP VLKDEVDRKP EYPKPDTQQM IPFQPRHLAP ENSTTRP00000015510/1-714 SRAKLAAIIP DPVVAPSIVP VLKDEVDRKP EYPKPDTQQM IPFQPRHLAP bmy_16588T0/1-585 SRAKLAAIIP DPVVAPSIVP VLKDEVDRKP EYPKPDTQQM IPFQPRHLAP ENSP00000315791/1-717 SRAKLAAIIP DPVVAPSIVP VLKDEVDRKP EYPKPDTQQM IPFQPRHLAP 601 650 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 PGLHPVPGGV FPVPPAAVVL MKLLPPPICF QGPFVQVDEL MEIFRRCKIP ENSTTRP00000015510/1-714 PGLHPVPGGV FPVPPAAVVL MKLLPPPICF QGPFVQVDEL MEIFRRCKIP bmy_16588T0/1-585 PGLHPVPGGV FPVPPAAVVL MKLLPPPICF QGPFVQVDEL MEIFRRCKIP ENSP00000315791/1-717 PGLHPVPGGV FPVPPAAVVL MKLLPPPICF QGPFVQVDEL MEIFRRCKIP 651 700 BACU008885/1-87 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011369/1-718 NTVEEAVRII TGGAPELAVE GNGPVESNAV LTKAVKRPNE DSDEDEEKGA ENSTTRP00000015510/1-714 NTVEEAVRII TGGAPELAVE GNGPVESNAV LTKAVKRPNE DSD-DDEKGA bmy_16588T0/1-585 NTVEEAVRII TGGAPELAVE GNGPVESNAV LTKAVKRPNE DSDEDEEKGA ENSP00000315791/1-717 NTVEEAVRII TGGAPELAVE GNGPVESNAV LTKAVKRPNE DSDEDEEKGA 701 750 BACU008885/1-87 ---------- -------- ENSBTAP00000011369/1-718 VVPPVHDIYR ARQQKRIR ENSTTRP00000015510/1-714 VVPPVHDIYR ARQQKRIR bmy_16588T0/1-585 VVPPVHDIYR ARQQKRIR ENSP00000315791/1-717 VVPPVHDIYR ARQQKRIR