KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:34 2014 Check: 00 .. Name: ENSTTRP00000006692/1-332 Len: 382 Check: 9453 Weight: 1.00 Name: ENSP00000262146/1-333 Len: 382 Check: 8721 Weight: 1.00 Name: ENSBTAP00000011379/1-337 Len: 382 Check: 4507 Weight: 1.00 Name: bmy_08733T0/1-315 Len: 382 Check: 1239 Weight: 1.00 Name: BACU011107/1-358 Len: 382 Check: 533 Weight: 1.00 // 1 50 ENSTTRP00000006692/1-332 MLGWIKRLIR MVFQQVG-SM QSVLWSGKPY GSSRSIVRKI GTNLSLIQCP ENSP00000262146/1-333 MLGWIKRLIR MVFQQVGVSM QSVLWSRKPY GSSRSIVRKI GTNLSLIQCP ENSBTAP00000011379/1-337 MLGWIKRLIR MIFQQVG-SM QSVLWSGKPY GSSRSIVRKI GTNLSLIQCP bmy_08733T0/1-315 ---------- ---------M QSVLWSGKPY GSSRSIVRKI GTNLSLIQCP BACU011107/1-358 ---------- ---------M DQVLWSGKPY GSSRSIVRKI GTNLSLIQCP 51 100 ENSTTRP00000006692/1-332 RVQFQLTSPT TEWSPRQPGE DAVVSFADVG WVAKEEGECS TRRRTEIRKR ENSP00000262146/1-333 RVQFQINSHA TEWSPSHPGE DAVASFADVG WVAKEEGECS ARLRTEVRSR ENSBTAP00000011379/1-337 RVQFQLTSPT TEWSSSPSGE DAVVSFADVG WVAEEEGECS TRQRIEVRSR bmy_08733T0/1-315 RVQFQLTSPT TEWSPSQQGE DAVVSFADVG WVAKEEGECL TRRRTEIRSR BACU011107/1-358 RVQFQLTSPT TGWSPSQPGG DAVVSFADVG WVAREEGACL TRRRTEIRLR 101 150 ENSTTRP00000006692/1-332 HPLQDDLPFF EKPLGRQFSL PNLSPEEPPL QTMTLANEEA LQKICALESE ENSP00000262146/1-333 PPLQDDLLFF EKAPSRQISL PDLSQEEPQL KTPALANEEA LQKICALENE ENSBTAP00000011379/1-337 PTLQDDLPFF EKPHSRQPSL PTLSPEEPPL QTSTLANEEA LQKICALESE bmy_08733T0/1-315 QPLQDDLPFF EKPPGRQFSL PNLSLEEPPL QTRTLANEEA LQ-ICALESE BACU011107/1-358 QPLQDDLPFF EKPPGRQFSL PNLSLEEPPP QTRTLANEEA LQKICALESE 151 200 ENSTTRP00000006692/1-332 LAALRAQIAK IVTLQEQQNL SAXXXXXXXX XXXXXXX--- ----XXXXXX ENSP00000262146/1-333 LAALRAQIAK IVTQQEQQNL TAGDLDSTTF G-----TIPP HP--PPPPPP ENSBTAP00000011379/1-337 LAALRAQIAK IVTLQEQQNL SAGDLESTRP AAAAAPSVPP APPLPPPPPP bmy_08733T0/1-315 LAALRAQIAK IVTLQEQQNL GAGDLESTAS VATAPPSVPP P---PPLPPP BACU011107/1-358 LAALRAQIAK IVTLQEQQSL SAGDLESTAS VATAPPSVPP P---PPPPPP 201 250 ENSTTRP00000006692/1-332 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262146/1-333 LPPPALGLHQ STSAVDLIKE RREKRANAGK TLVKNNPKKP EMPNMLEILK ENSBTAP00000011379/1-337 LPSP--GLQQ STSAIDLIKE RRRRNASAGK TPVKNSPKKT DLPNMLEILK bmy_08733T0/1-315 LPPS--GLHQ STSAIDLIRD RREKNACAGK TSVKSSPKKS DMPNMLEILK BACU011107/1-358 LPPS--GLHQ STSAIDLIRD RREKNACAGK TSVKSSPKKS DMPNMLEILK 251 300 ENSTTRP00000006692/1-332 XXXXXXXXXX XXSAQDTKPK PVDAAD---- ---------- ---------- ENSP00000262146/1-333 EMNSVKLRSV KRSEQDVKPK PVDATD---- ---------- ---------- ENSBTAP00000011379/1-337 DMNSVKLRSV KRSEQDTKPK PADAAD---- ---------- ---------- bmy_08733T0/1-315 DMNSMKLRSV KRSEEDTKPK PVDVSD---- ---------- ---------- BACU011107/1-358 DMNSVKLRSV KRSEEDTKPK PVDVSDPAAL IAEALKKKFA YRYRCDSQGE 301 350 ENSTTRP00000006692/1-332 ---------- --------PA ALIAEALRKK FAYRYRCDSQ GEVEKGIPKS ENSP00000262146/1-333 ---------- --------PA ALIAEALKKK FAYRYRSDSQ DEVEKGIPKS ENSBTAP00000011379/1-337 ---------- --------PA ALIAEALKKK FAYRYRSDSQ GEAEKGIQKS bmy_08733T0/1-315 ---------- --------PA ALIAEALKKK FAYRYRCDSQ GEVEKGIPKS BACU011107/1-358 VEKGSPKSES AKPVDVSDPA ALIAEALKKK FAYRYRCDSQ GEVEKGIPKS 351 400 ENSTTRP00000006692/1-332 ESEGTSERVL FGPHMLKSTG KMKALIENVS TS ENSP00000262146/1-333 ESEATSERVL FGPHMLKPTG KMKALIENVS DS ENSBTAP00000011379/1-337 ESEATSERVL FGPHMLKSTG KMKALIENAS TS bmy_08733T0/1-315 ESEATSERVL FGPHMLKSTG KMKALIENVS TS BACU011107/1-358 ESEATSERGL FGPHMLKSTG KMKALIENVS TS