KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:36 2014 Check: 00 .. Name: ENSP00000422581/1-387 Len: 461 Check: 3647 Weight: 1.00 Name: ENSBTAP00000011391/1-426 Len: 461 Check: 2323 Weight: 1.00 Name: ENSTTRP00000011988/1-384 Len: 461 Check: 2504 Weight: 1.00 Name: bmy_00285T0/1-455 Len: 461 Check: 8863 Weight: 1.00 Name: BACU005174/1-391 Len: 461 Check: 9668 Weight: 1.00 // 1 50 ENSP00000422581/1-387 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011391/1-426 MSKRPRSQLE QDTPGGVRCE TRPQPPQLFR SGDQMAVCGH SLPPQERGSP ENSTTRP00000011988/1-384 ---------- ---------- ---------- ---------- ---------- bmy_00285T0/1-455 MSKRLCSQLE QEIPEDARCE IHLEPPQLFC HDDQITLCDK YFTSQEQKNR BACU005174/1-391 MSKRLCSQLE QEIPEDARCQ IHLEPPQLFC HDDQITLCDK YFTSQEQKNP 51 100 ENSP00000422581/1-387 MVCG-IQEAA ENYRKLFQEI LNTSREKLEA AKSILTDEQE RMAMIQEEEQ ENSBTAP00000011391/1-426 VVVNEVPEAA EKYRKLFQEM LDTLKEKLEA AKIILADEQE RMVMMQKEEQ ENSTTRP00000011988/1-384 VVYG-VQEAA ENYRKLFQEI LNTLKEKLEV AKSILADEQE RMVMMQEEEQ bmy_00285T0/1-455 VVYG-VQEAA ENYRKLFQEI LNTLKEKLEV AKSILADEQE RMVMMQEEEQ BACU005174/1-391 VVYG-VQEAA ENYRKLFQEI LNTLKEKLEV AKSILADEQE RMVMMQEEEQ 101 150 ENSP00000422581/1-387 NFKKMIESEY SMRLRLLNEE CEQNLQRQQE CISDLNLRET LLNQAIKLAT ENSBTAP00000011391/1-426 NFKEMIESEY SIRIRLMTEE NEMNLQSLQG R-FNLNLRQT SQNQLMEFAT ENSTTRP00000011988/1-384 NFKAMIESXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00285T0/1-455 NFKAMIESEY RIRFWLLIEE NKVNFQSPQG CGFNLNLREA SQNQLMEFAT BACU005174/1-391 NFKAMIESEY RIRFRLMIEE NKVNFQSLQG CGFNLNLREA SQNQLMEFAT 151 200 ENSP00000422581/1-387 ELEEMFQEML QRLGRVGREN MEKLKESEAR ASEQVRSLLK LIVELEKKCG ENSBTAP00000011391/1-426 NLKEKFQETL QRLNFLGREN MKKLKESEVR LSEQICSLQQ ITTELERKCR ENSTTRP00000011988/1-384 XXXXXXXXXX XRLNCLGREN MSKLRESEVR LSEQICGLQK ITTELEKKCG bmy_00285T0/1-455 KLKEKFQEIL QRLNCLGREN MSKLRESEVR LSEQICSLQK ITTELEKKCG BACU005174/1-391 KLKEKFQEI- ---------- ---------- ---------- ---------- 201 250 ENSP00000422581/1-387 EGTLALLKNA KYSLERSKSL LLEHLEPAHI TDLSLCHIRG LSSMFRVLQR ENSBTAP00000011391/1-426 QPASVLLQNA KYALERSESL LYQFLQPAQI TDLSLCQITG MSKMLKVLQR ENSTTRP00000011988/1-384 QSASALLQNA RYSLERSESL LLQCLEPARI TDLSLCQITG MSKMLEVLQR bmy_00285T0/1-455 QSASALLQNA RYSLERSESL LLQCLEPARI TDLSXCQITG MSKMLEVLQR BACU005174/1-391 ------LQNA RYSLERSESL LLQCLEPARI TDLSLCQITG MSKMLEVLQR 251 300 ENSP00000422581/1-387 HLTLDPETAH PCLALSEDLR TMRLRHGQQD GAGNPERLDF SAMVLAAESF ENSBTAP00000011391/1-426 PITLDPKTAH PYLVLSEDLR SVRLRNVQRG VPGHPERFDF SATVLGAQSF ENSTTRP00000011988/1-384 PITLDPKTAH PCLVLSEDLR SVRLRNVQQD VPSHPERFDF SATVLGVESF bmy_00285T0/1-455 PVTLDPKTAH PCLVLSEDLR SVRLRNVQQE VPSHPERFDF SATVLGVESF BACU005174/1-391 PVTLDPETAH PCLVLSEDLR SVRLRNVQQE VPSRPERFDF SATVLGVESF 301 350 ENSP00000422581/1-387 TSGRHYWEVD VEKATRWQVG IYHGSADAKG STARASGEKV LLTGSVMGTE ENSBTAP00000011391/1-426 TSGRHYWEVD VGRAAQWQLG VYRSST---- -VRNSSGNKV LLTGSLMGTD ENSTTRP00000011988/1-384 TSGWHYWEVD VEKATQWQLG VHGSSA---- -SRSASGDKV LFTGSIMGTD bmy_00285T0/1-455 TSGRHYWEVD VEKATQWQLG VHRSSA---- -SRSASGDKV LFTGSMMGTD BACU005174/1-391 TSGRHYWEVD VEKATQWQLG VHRSSA---- -SRSASRDKV LFTGSMMGTD 351 400 ENSP00000422581/1-387 WTLWVFPPLK RLFLEKKLDT VGVFLDCEHG QISFYNVTEM SLIYNFSHCA ENSBTAP00000011391/1-426 HTFWTFPPFK RVSLREQVHR VGVFLDYEYE QISFYDATKS SLIYNFSYLA ENSTTRP00000011988/1-384 YTFWAFPPLK RVSWREQMHR VGVFLDYEYG QISFYDVTKR SLIYNFSDLA bmy_00285T0/1-455 YTFWAFPPLK RVSLREQMHR VGVFLDYEYG QISFYDVTKR SLIYNFSYLA BACU005174/1-391 YTFWAFPPLK RVSLREQMHR VGVFLDYEYG QISFYDVTKR SLIYNFSYLT 401 450 ENSP00000422581/1-387 FQGALRPVFS LCIPNGDTSP DSLTI-LQHG PSCDATVSP- ---------- ENSBTAP00000011391/1-426 FQGALRPIFS LSISSGGVNS DSLSICLPHV SP-------- ---------- ENSTTRP00000011988/1-384 FQGALRPVFS LCISNGGMNS DSLSICLPHV SSCNGTFSPQ ---------- bmy_00285T0/1-455 FQGALRPVFS LCISNGGMNS DSLSICLPHV SSCNGTLSPQ SSLMTAPNEV BACU005174/1-391 FQGALRPVFS LCISNGGMNS DSLSICLPHV SSCNGTLSPQ SSLV------ 451 500 ENSP00000422581/1-387 ---------- - ENSBTAP00000011391/1-426 ---------- - ENSTTRP00000011988/1-384 ---------- - bmy_00285T0/1-455 DFSKCHFIMI Q BACU005174/1-391 ---------- -