KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:37 2014 Check: 00 .. Name: bmy_21110T0/1-197 Len: 355 Check: 6137 Weight: 1.00 Name: BACU012296/1-88 Len: 355 Check: 6994 Weight: 1.00 Name: ENSTTRP00000013751/1-302 Len: 355 Check: 8135 Weight: 1.00 Name: ENSP00000381339/1-354 Len: 355 Check: 8547 Weight: 1.00 Name: ENSBTAP00000011395/1-354 Len: 355 Check: 8860 Weight: 1.00 // 1 50 bmy_21110T0/1-197 ---------- ---------- ---------- ---------- ---------- BACU012296/1-88 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013751/1-302 MGSGISSENK ESGKRSKELE KKLQEDAERD ARTVKLLLL- ---------- ENSP00000381339/1-354 MGSGISSESK ESAKRSKELE KKLQEDAERD ARTVKLLLLG AGESGKSTIV ENSBTAP00000011395/1-354 MGIGISSESK ESAKRSKELE KKLQEDAERD ARTVKLLLLG AGESGKSTIV 51 100 bmy_21110T0/1-197 ---------- ---------- ---------- ---------- --------ML BACU012296/1-88 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013751/1-302 ---------- ---------- ---------- -------XXX XXXXXXXXXX ENSP00000381339/1-354 KQMKIIHKNG YSEQECMEFK AVIYSNTLQS ILAIVKAMTT LGIDYVNPRS ENSBTAP00000011395/1-354 KQMNITGING YVEPSCGEAK NLLYHSSLYS LLTIVKKQDT LRISYLSPTS 101 150 bmy_21110T0/1-197 KEDQRQLYAI TNTLEDGSMT PELAEVIKRL WRDPGIQACF ERASEYQLND BACU012296/1-88 ---------- --------MT PELAEVIKRL WRDPGIQACF ERVSEYQLND ENSTTRP00000013751/1-302 XKDQRQLYAI TNTLEDGSMM PELAEVIKRL WRDPGIQACF ERASEYQVND ENSP00000381339/1-354 AEDQRQLYAM ANTLEDGGMT PQLAEVIKRL WRDPGIQACF ERASEYQLND ENSBTAP00000011395/1-354 SEDQQQLCAM ANTLEDGSMT PELAEIIKRL WRDPGVQACF ERASEYQLND 151 200 bmy_21110T0/1-197 SAAYYLNDLD RIAAPGYVPN EQDVLHSRVK TTRITETQFS FKDLHFRMFD BACU012296/1-88 SAAYYLNDLD RIAAPGYVPN EQDTLHSRVK TTRITETQFS FKDLHF---- ENSTTRP00000013751/1-302 SAAYYLNDLD RRAAPGYVPN EQDVPHSRVK TTRITETQFS FKDLHFRMLD ENSP00000381339/1-354 SAAYYLNDLD RITASGYVPN EQDVLHSRVK TTGIIETQFS FKDLHFRMFD ENSBTAP00000011395/1-354 SAAYYLNDLD RIAAPGYVPN EQDVLHSRVK TTGIIETQFS FKDLHFRMFD 201 250 bmy_21110T0/1-197 VGGQRPERKK WIHYLKELH- ---------- ---------- -----ELYFN BACU012296/1-88 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013751/1-302 AGGQRSERKK WIP-LEGVT- IIFCAAVSAY DMLLVEDEEV NRMHESLHLF ENSP00000381339/1-354 VGGQRSERKK WIHCFEGVTC IIFCAALSAY DMVLVEDEEV NRMHESLHLF ENSBTAP00000011395/1-354 VGGQRSERKK WIHCFEGVTC IIFCAALSAY DMVLVEDEEV NRMHESLHLF 251 300 bmy_21110T0/1-197 RTECMKAFTC STVSVIT--- ---------- ---------- --SPNTFEDA BACU012296/1-88 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013751/1-302 NSICNHKYFA TTSIVLFLNK KDLFQEKVTK GHLGICFPEY TEGPNTFEEG ENSP00000381339/1-354 NSICNHKYFS TTSIVLFLNK KDIFQEKVTK VHLSICFPEY T-GPNTFEDA ENSBTAP00000011395/1-354 NSICNHKYFA TTSIVLFLNK KDLFQEKVTK VHLSICFPEY T-GPNTFEDA 301 350 bmy_21110T0/1-197 RNYIKNQFLD LNLRK-DKEI YSHMTCATDT QNVKFAFDTV TDIIKRI--- BACU012296/1-88 ---------S VQLRA-RSVI ---------- ---------- ---------- ENSTTRP00000013751/1-302 RNYIKNQFLD LDLKK-DKEI YSHMTCATDT QNVKFVFDAV TDI--KENLK ENSP00000381339/1-354 GNYIKNQFLD LNLKKEDKEI YSHMTCATDT QNVKFVFDAV TDIIIKENLK ENSBTAP00000011395/1-354 GNYIKNQFLD LNLKKEDKEI YSHMTCATDT QNVKFVFDAV TDIIIKENLK 351 400 bmy_21110T0/1-197 ----- BACU012296/1-88 ----- ENSTTRP00000013751/1-302 DCVLF ENSP00000381339/1-354 DCGLF ENSBTAP00000011395/1-354 DCGLF