KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:40 2014 Check: 00 .. Name: bmy_10165T0/1-339 Len: 356 Check: 2889 Weight: 1.00 Name: ENSP00000266126/1-351 Len: 356 Check: 4646 Weight: 1.00 Name: ENSBTAP00000011424/1-351 Len: 356 Check: 4493 Weight: 1.00 Name: ENSTTRP00000001803/1-316 Len: 356 Check: 2833 Weight: 1.00 Name: BACU010818/1-351 Len: 356 Check: 5307 Weight: 1.00 // 1 50 bmy_10165T0/1-339 MPGAEAKGSE LSERIESFVE ALKRXGGRHS SEDMARETLG LLRRIITDHR ENSP00000266126/1-351 MPGSAAKGSE LSERIESFVE TLKRGGGPRS SEEMARETLG LLRQIITDHR ENSBTAP00000011424/1-351 MPGAAAKGSE LSERIESFVE ALKRGGGRRS SEDMARETLG LLRRIITDHR ENSTTRP00000001803/1-316 MPGAEAKGSE LSERIESFVE ALKRGGGRHS SEDMARETLG LLRRIITDHR BACU010818/1-351 MPGAEAKGSE LSERIESFVE ALKRGGGRHS SEDMARETLG LLRRIITDHR 51 100 bmy_10165T0/1-339 WSNAGELMEL IRREGRRMTA AQPSETTVGN MVRRVLRIIR EEYGRLHGRS ENSP00000266126/1-351 WSNAGELMEL IRREGRRMTA AQPSETTVGN MVRRVLKIIR EEYGRLHGRS ENSBTAP00000011424/1-351 WSNAGELMEL IRREGRRMTA AQPSETTVGN MVRRVLRIIR EEYGRLHGRS ENSTTRP00000001803/1-316 WSNAGELMEL IRREGRRMTA AQPSETTVGN MVRRVLRIIR EEYGRLHGRS BACU010818/1-351 WSNAGELMEL IRREGRRMTA AQPSETTVGN MVRRVLRIIR EEYGRLHGRS 101 150 bmy_10165T0/1-339 DESDQQESLH KLLTSGGLSE DFRSHYAQLQ SNIIEAINEL LVELEGTTEN ENSP00000266126/1-351 DESDQQESLH KLLTSGGLNE DFSFHYAQLQ SNIIEAINEL LVELEGTMEN ENSBTAP00000011424/1-351 DESDQQESLH KLLTSGGLSE DFRSHYAQLQ SNIIEAINEL LVELEGTTEN ENSTTRP00000001803/1-316 DESDQQESLH KLLTSGGSSE DFRSHYAQLQ SNIIEAINEL LVELEGTTEN BACU010818/1-351 DESDQQESLH KLLTSGGLSE DFRSHYAQLQ SNIIEAINEL LVELEGTTEN 151 200 bmy_10165T0/1-339 IAAQALEHIH SNEVIMTIGF SRTVEAFLKE AARKRKFHVI VAECAPFCQG ENSP00000266126/1-351 IAAQALEHIH SNEVIMTIGF SRTVEAFLKE AARKRKFHVI VAECAPFCQG ENSBTAP00000011424/1-351 IAAQALEHIH SNEVIMTIGF SRTVEAFLRE AARKRKFHVI VAECAPFCQG ENSTTRP00000001803/1-316 IAAQALEHIH SNEVIMTIGF SRTVEAFLKE AARKRKFHVI VAECAPFCQG BACU010818/1-351 IAAQALEHIH SNEVIMTIGF SRTVEAFLKE AARKRKFHVI VAECAPFCQG 201 250 bmy_10165T0/1-339 HEMAVNLSKT GIETTVMTDA AIFAVMSRVN K--------- --------DG ENSP00000266126/1-351 HEMAVNLSKA GIETTVMTDA AIFAVMSRVN KVIIGTKTIL ANGALRAVTG ENSBTAP00000011424/1-351 HEMAVNLSKA GIETTVMTDA AIFAVMSRVN KVIIGTKTIL ANGALRAVAG ENSTTRP00000001803/1-316 HEMAVNLSKT GIETTVMTDA AIFAVMSRVN KVIIGTKTIL ANGALRAVTG BACU010818/1-351 HEMAVNLSKT GIETTVMTDA AIFAVMSRVN KVIIGTKTIL ANGALRAVTG 251 300 bmy_10165T0/1-339 SHFLSCPKGD HWHKDHPGQR CPESCDRNSY SSTGSKTPFH PTHRLCTYVQ ENSP00000266126/1-351 THTLALAAK- --HHSTPLIV CAPMFKLSP- QFPNEEDSFH -KFVAPEEVL ENSBTAP00000011424/1-351 THTLALAAK- --HHSTPLIV CAPMFKLSP- QFPNEEDSFH -KFVAPEEVL ENSTTRP00000001803/1-316 THTLALAAK- --HHSTPLIV CAPMFKLSP- QFPNEEDSFH -KFVAPEEVL BACU010818/1-351 THTLALAAK- --HHSTPLIV CAPMFKLSP- QFPNEEDSFH -KFVAPEEVL 301 350 bmy_10165T0/1-339 AFPTGHILEK VSVHCPVFDY VPPELITLFI SNIGGNAPSY IYRLMSELYH ENSP00000266126/1-351 PFTEGDILEK VSVHCPVFDY VPPELITLFI SNIGGNAPSY IYRLMSELYH ENSBTAP00000011424/1-351 PFTEGDILEK VSVHCPVFDY VPPELITLFI SNIGGNAPSY IYRLMSELYH ENSTTRP00000001803/1-316 PFTEGD-LEK VSVHCPVFDY VP-------- ---------- ---------- BACU010818/1-351 PFTEGDILEK VSVHCPVFDY VPPELITLFI SNIGGNAPSY IYRLMSELYH 351 400 bmy_10165T0/1-339 PDDHVL ENSP00000266126/1-351 PDDHVL ENSBTAP00000011424/1-351 PDDHVL ENSTTRP00000001803/1-316 ------ BACU010818/1-351 PDDHVL