KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:41 2014 Check: 00 .. Name: ENSP00000376070/1-482 Len: 548 Check: 1888 Weight: 1.00 Name: ENSTTRP00000001155/1-482 Len: 548 Check: 426 Weight: 1.00 Name: ENSBTAP00000011435/1-482 Len: 548 Check: 9719 Weight: 1.00 Name: bmy_02971T0/1-355 Len: 548 Check: 9305 Weight: 1.00 Name: BACU014139/1-397 Len: 548 Check: 9646 Weight: 1.00 // 1 50 ENSP00000376070/1-482 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001155/1-482 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011435/1-482 ---------- ---------- ---------- ---------- ---------- bmy_02971T0/1-355 GARHLHAPVR RGTGCGCGSA AAQGSRAAAE GTGAGTDLRA AERDTRRRRT BACU014139/1-397 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000376070/1-482 ---------- -----MDSFG QPRPEDNQSV VRRMQKKYWK TKQVFIKATG ENSTTRP00000001155/1-482 ---------- -----MDFFG QPRPEDNQSV VSRMQKKYWK TKQVFIKATG ENSBTAP00000011435/1-482 ---------- -----MDFFG QHRSEDNQSV VSRMQKKYWK TKQVFIKATG bmy_02971T0/1-355 GASRLRRRVI SCSHSMDFFG QPRPEDNQSV VSRMQKKYWK TKQVFIKATG BACU014139/1-397 ---------- -----MDFFG QPRPEDNQSV VSRMQKKYWK TKQVFIKATG 101 150 ENSP00000376070/1-482 KKEDEHLVAS DAELDAKLEV FHSVQETCTE LLKIIEKYQL RLNVISEEEN ENSTTRP00000001155/1-482 KKEDEHIVAS DAELDAKLEV FHSIQETCTE LLKIVEKYQL KLNVISEEEN ENSBTAP00000011435/1-482 KKEDEHVVAS DAELDAKLEV FHSIQETCTE LLKIVEKYQL RLNVISEEEN bmy_02971T0/1-355 KKEDEHVVAS DAELDAKLEV FHSIQETCTE LLKIVEKYQL RLNVISEEEN BACU014139/1-397 KKEDEHVVAS DAELDAKLEV FHSIQETCTE LLKIVEKYQL RLNVISEEEN 151 200 ENSP00000376070/1-482 ELGLFLKFQA ERDATQAGKM MDATGKALCS SAKQRLALCT PLSRLKQEVA ENSTTRP00000001155/1-482 ELGLFLKFQA ERDTTQAGKM MDATGKALCS SAKQRLALYT PLSRLKQEVA ENSBTAP00000011435/1-482 ELGLFLKFQA ERDTTQAGKM MDATGKALCS SAKQRLALYT PLSRLQQEVA bmy_02971T0/1-355 ELGLFLKFQG ERDTTQAGKM MXATGKALCS SAKQRLALYT PLSRLKQEVA BACU014139/1-397 ELGLFLKFQA ERDTTQAGKM MDATGKALCS SAKQRLALYT PLSRLKQEVA 201 250 ENSP00000376070/1-482 TFSQRAVSDT LMTINRMEQA RTEYRGALLW MKDVSQELDP DTLKQMEKFR ENSTTRP00000001155/1-482 SFSQRAVSDT LMTVNRMEQA RTAYTGALLW MKDVSQELDP YTLKQMEKLR ENSBTAP00000011435/1-482 TFSQRAISDT LTTINRMEQA RTEYRGALLW MKDVSQELDP DTLKQVEKFR bmy_02971T0/1-355 TFSERAVSDT LMTVNRMEQA RTEYRGALLW MKDVSQELDP DTLKQMEKFR BACU014139/1-397 TFSERAVSDT LMTVNRMEQA RTEYRGALLW MKDVSQELDP DTLKQMEKFR 251 300 ENSP00000376070/1-482 KVQMQVRNSK ASFDKLKMDV CQKVDLLGAS RCNMLSHSLT TYQRTLLGFW ENSTTRP00000001155/1-482 KVQIQVRNSK ASFDKLKMDV CQKVDLLGAS RCNMLSHSLA TYQRTLLGFW ENSBTAP00000011435/1-482 KVQIQVRNSK TSFDKLKMDV CQKVDLLGAS RCNMLSHSLA TYQRTLLGFW bmy_02971T0/1-355 KVQIQVRNSK ASFDKLKMDV CQKVDLLGAS RCNMLSHSLA TYQRTLLGFW BACU014139/1-397 KVQIQVRNSK ASFDKLKMDV CQKVDLLGAS RCNMLSHSLA TYQRTLLGFW 301 350 ENSP00000376070/1-482 KKTARMMSQI HEACIGFHPY DFVALKQLQD TPSKISEDNK DEQI-GGFLT ENSTTRP00000001155/1-482 EKTARMMSQI HGACTGFHPC DFVALKQLQG TPVKLTEDHK EERIEDSSLP ENSBTAP00000011435/1-482 EKTARMMSQI HGTCIGLHPY DFVALKQLQD TPMKLTEDHK EERREDSSLP bmy_02971T0/1-355 EKTARMMSQI HGTCIGFHPY DFVALKQLQD TPIKLTEDHK EERIEDSSLP BACU014139/1-397 EKTARMMSQI HGTCIGFHPY DFVALKQLQD TPIKLTEDHK EERIEDSSLP 351 400 ENSP00000376070/1-482 EQLNKLVLSD EEASFESEQA NKDHNEKHSQ MREFGAPQFS NSENVAKDLP ENSTTRP00000001155/1-482 ENLNKLVFSD EEVSLGSEPA TEDHKEKHSG IREFGAPQFS NSENVAKDVP ENSBTAP00000011435/1-482 ENLNRLVLSD EEVNLGSEPA TEDHKEKHSG IKEFVAPQFS DSENVAKDLP bmy_02971T0/1-355 ENLNK----- ---------- ---------- ---------- ---------- BACU014139/1-397 ENLNKLVLSD EEVSLGSEPA TEDHKEKHSG IREFGAPQFS NSE------- 401 450 ENSP00000376070/1-482 VDSLEGEDFE KEFSFLNNLL SSGSSSTSEF TQECQTAFGS PSASLTSQEP ENSTTRP00000001155/1-482 VDSLE-DDFE KEFSFLNSLL SPGCWSASEF SQECQAVFGS PKASLTSQEP ENSBTAP00000011435/1-482 VDSLE-DDFE KEFSFLNSLL SPGCWSAGES SQECQAVFGS PKASLTCQEP bmy_02971T0/1-355 ---------- ---------- ---------- ---------- ---------- BACU014139/1-397 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000376070/1-482 SMGSEPLAHS SRFLPSQLFD LGFHVAGAFN NWVSQEESEL CLSHTDNQPV ENSTTRP00000001155/1-482 SGGSEPLAHS SGFLPSQLFD LGLHAAGAFN XXXXXXXXXX XXXXXXXXXX ENSBTAP00000011435/1-482 SGGSEPLAHS AGFLPSQLFD LGLHAAGAFN SWASHGGLEF PLSHIDNQPV bmy_02971T0/1-355 ---------- ---------- ---------- ---------- ---------- BACU014139/1-397 ---------- ---------- ---------N GWASQGGLEL PLSHIDNQSV 501 550 ENSP00000376070/1-482 PSQSPKKLTR SPNNGNQDMS AWFNLFADLD PLSNPDAIGH SDDELLNA ENSTTRP00000001155/1-482 XXXXXXXXXX XPNSGNQDMS AWFNLFADLD PLSNPDAIGH SDDELLNA ENSBTAP00000011435/1-482 PSQSPKKLTK SPNSGNQDMS AWFNLFADLD PLSNPDAIGH SDDELLNA bmy_02971T0/1-355 ---------- ---------- ---------- ---------- -------- BACU014139/1-397 PSQSPKKLTK SPNSGNQDMS AWFNLFADLD PLSNPDAIGH SDDELLNA