KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:46 2014 Check: 00 .. Name: ENSP00000233057/1-551 Len: 556 Check: 5614 Weight: 1.00 Name: ENSBTAP00000011469/1-533 Len: 556 Check: 4612 Weight: 1.00 Name: ENSTTRP00000006507/1-539 Len: 556 Check: 6906 Weight: 1.00 Name: bmy_13520T0/1-496 Len: 556 Check: 5610 Weight: 1.00 Name: BACU019232/1-539 Len: 556 Check: 103 Weight: 1.00 // 1 50 ENSP00000233057/1-551 MAGDLSAGFF MEELNTYRQK QGVVLKYQEL PNSGPPHDRR FTFQVIIDGR ENSBTAP00000011469/1-533 MATGRSPCFY IEELNKYQQK NGVEVRYCEL AKTGPPHNFR FTYQVIIDDK ENSTTRP00000006507/1-539 MASGRSPCFY IEELNKYQQR NTAVLKYCEL SKTGPPHNLR FTYQVIIDGR bmy_13520T0/1-496 MASGRSPCFY IEELNKYQQK NSAVLKYREL SKTGPPHNLR FTYQVIIDGK BACU019232/1-539 MASGRSPCFY IEELNKYQQK NSAVLKYREL SKTGPPHNLR FTYQVIIDGK 51 100 ENSP00000233057/1-551 EFPEGEGRSK KEAKNAAAKL AVEILNKEKK AVSPLLLTTT NSSEGLSMGN ENSBTAP00000011469/1-533 EYPKAEGRSK KEAKNAAAKL ALEIINKDRK SVSFSSQLTT NIPEGPPIEN ENSTTRP00000006507/1-539 EFPKAEGRSK KEAKNAAAKL AFEIISKEQK AASPSSLQTG DPSEVPPIEN bmy_13520T0/1-496 EFPKAEGRSK KEAKNAAAKL AFEIISKEQK ATSPSSLQTG NPSEGPPIEN BACU019232/1-539 EFPKAEGRSK KEAKNAAAKL AFEIISKEQK ATSPSSLQTG NPSEGPPIEN 101 150 ENSP00000233057/1-551 YIGLINRIAQ KKRLTVNYEQ CASGVHGPEG FHYKCKMGQK EYSIGTGSTK ENSBTAP00000011469/1-533 YIGRLNTISQ KKNLCVTYEE CKSKGDGPEG FHYICKIGQE EYGSGVGSTK ENSTTRP00000006507/1-539 YIGRVNTIAQ KKNLSVIYEE CESRDSGPDK FHYKCKIGQN EYGIGIGSTK bmy_13520T0/1-496 YIGRVNTISQ KKNLSVIYEE CESRDSEPEK FHYKCKIGQN EYGIGIGSTK BACU019232/1-539 YIGRVNTISQ KKNLSVIYEE CESRDSEPEK FHYKCKIGEN EYGIGIGSTK 151 200 ENSP00000233057/1-551 QEAKQLAAKL AYLQILSEET SVKSDYLSSG SFATTC-ESQ SNSLVTSTLA ENSBTAP00000011469/1-533 QEAKQLAAKL AYEKIESE-- TMRDG----- -FSAACGDVE RNSPAVSTSS ENSTTRP00000006507/1-539 QEAKQLAAKL AYEKIQSE-- NLMKADASSG CFNTVCGDVQ SNSSATNTSA bmy_13520T0/1-496 QEARQLAAKL AYEKIQSE-- NLMKADPSSG CFNTVCGDVQ SNSSAISTSA BACU019232/1-539 QEARQLAAKL AYEKIQSE-- NLMKADASSG CFNTVCGDVQ SNSSATNTSA 201 250 ENSP00000233057/1-551 SESSSEGDFS ADTSE-INSN SDSLNSSSLL M-NGLRNNQR KAKRSLAPRF ENSBTAP00000011469/1-533 SESPSENGFS TNASERSDNN SGTLNSSSVS PGDGSRNNSR KVKRSLAPTF ENSTTRP00000006507/1-539 SESPSENDFS TSEAE-SNDN SDALDKSFQS PENSSRNNPR KVKRSLAPRF bmy_13520T0/1-496 SESPSENDFS TNEAE-SNDN SDTLDKSFQS PG----NSSR KVKRSLAPRF BACU019232/1-539 SESPSENDFS ANEAE-SNDN SDSSDKSFQS PGVNSRNNPG KVKRSLAPRF 251 300 ENSP00000233057/1-551 DLP-DMKETK YTVDKRFGMD FKEIELIGSG GFGQVFKAKH RIDGKTYVIK ENSBTAP00000011469/1-533 VSPVKTEGNI YSVNERLFND FTEVTPIGSG GFGQVFKAKH RIDKKTYVIK ENSTTRP00000006507/1-539 DSPVKTEESM YTVDSRFIRD FTEITPIGEG GFGQVFKAKH KIDEKTYVIK bmy_13520T0/1-496 DSPVEKEENK YTVDSRFIRD FTEVTPIDAG GFGQVFKAKH RIDEKTYVIK BACU019232/1-539 DSPVEREKNM YTVDSRFIRD FTEVTPLDAG GFGQVFKAKH RIDEKTYVIK 301 350 ENSP00000233057/1-551 RVKYNNEKAE REVKALAKLD HVNIVHYNGC WDGFDYDPET SDDSLESSDY ENSBTAP00000011469/1-533 CVKYNSEKVE REVKALATLN HPNIVHYHNC WDGH------ --------DY ENSTTRP00000006507/1-539 CVKYNNEKVE REVKALAMLD HANIVHYHSC WDGL------ --------DY bmy_13520T0/1-496 CVKYNNE--- ---------- ---------- ---------- ---------- BACU019232/1-539 CVKYNNEKVE REVKALAVLD HANIVHYHSC WDGL------ --------DY 351 400 ENSP00000233057/1-551 DPENSKNSSR SKTKCLFIQM EFCDKGTLEQ WIEKRRGEKL DKVLALELFE ENSBTAP00000011469/1-533 DPEQSLNSSR SKTRCLFIQM EYCDKGTLDQ WIEKRRGKKP DKRLALDFFQ ENSTTRP00000006507/1-539 DPEQSINSSR SKTRCLFIQM EYCDKGTLKQ WINSRRGKEQ DKRLALVFFE bmy_13520T0/1-496 ---------- SKTRCLFIQM EYCDKGTLEQ WIDXRRGKEQ DKCLALVFFE BACU019232/1-539 NPEQSINSSR SKTRCLFIQM EYCDKGTLEQ WIDSRRGKEQ DKCLALVFFE 401 450 ENSP00000233057/1-551 QITKGVDYIH SKKLIHRDLK PSNIFLVDTK QVKIGDFGLV TSLKNDGKRT ENSBTAP00000011469/1-533 QITTGVHYIH SEQLIHRDLK PGNIFLVAMN QIKIGDFGLV TYLKNDETRT ENSTTRP00000006507/1-539 QITEGVHYIH SKQLIHRDLK PHNIFLVGTN QIKIGDFGLV TYLKNDEART bmy_13520T0/1-496 QITEGVNYIH SKQLIHRDLK PSNIFLVDMN QIKIGDFGLV TYLKNDEART BACU019232/1-539 QITEGVHYIH SKQLIHRDLK PSNIFLVDMN QIKIGDFGLV TYLKNDEART 451 500 ENSP00000233057/1-551 RSKGTLRYMS PEQISS-QDY GKEVDLYALG LILAELLHVC DTAFETSKFF ENSBTAP00000011469/1-533 SKKGTLRYMS PEQLSSVKDY GNEVDIYALG LILAELLHIC LTSLETQKFF ENSTTRP00000006507/1-539 SKQGTRLYMS PEQIACIEDY GNEVDIFALG LILAELLHIC STEVETVKIL bmy_13520T0/1-496 SKHGTRRYMS PEQISSVKDY GNEVDIFALG LILAELLHIC ATSLGTVKLF BACU019232/1-539 SKHGTRRYMS PEQISSVKDY GNEVDIFALG LILAELLHIC STLSETVKLF 501 550 ENSP00000233057/1-551 TDLRDGIISD IFDKKEKTLL QKLLSKKPED RPNTSEILRT LTVWKKSPEK ENSBTAP00000011469/1-533 DDLRNGRL-D VFDDKEKDLL EKLLSVDPKK RPTASEILKT LKEWNNVTEK ENSTTRP00000006507/1-539 EGLRDGTFSV VFDNKEKNLL QKLLSKDPKK RPNTLKILKT LKEWNNIAEK bmy_13520T0/1-496 AALRAGIFSD VFDNKEKNLL QKLLSNDPKK RPNTLEILKT LKEWNNITEK BACU019232/1-539 KDLRDGIFSD VFDNKEKNLL QKLLSNDPKK RPNALEILKT LKEWNNITEK 551 600 ENSP00000233057/1-551 NERHTC ENSBTAP00000011469/1-533 KKRNTC ENSTTRP00000006507/1-539 KKWNTC bmy_13520T0/1-496 KKRNTC BACU019232/1-539 KKRNTC