KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:43:48 2014 Check: 00 .. Name: ENSTTRP00000011576/1-491 Len: 499 Check: 1833 Weight: 1.00 Name: ENSBTAP00000011481/1-498 Len: 499 Check: 2057 Weight: 1.00 Name: bmy_03579T0/1-252 Len: 499 Check: 9726 Weight: 1.00 Name: BACU010790/1-494 Len: 499 Check: 6651 Weight: 1.00 // 1 50 ENSTTRP00000011576/1-491 MHKSRGQSRR HGRRSHRHNP WFRQHGSNE- ---RNNTRAA K-PQGSSHSD ENSBTAP00000011481/1-498 MHQSSWKSRR HRRRGHRHNA WFRPHGSNES YSCRKDAGVQ QSPQGSSDGH bmy_03579T0/1-252 ---------- ---------- ---------- ---------- ---------- BACU010790/1-494 MHKSRGQSRR HGRRSHRHNA WFRQHGSNE- ---RNNTGAQ QSPQGSSHSD 51 100 ENSTTRP00000011576/1-491 DEAPSTSSST AGSSSVPXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000011481/1-498 GEAPST-SST AGSSSVPDLP GYYFDPEKKR YFRLLPGHNN CNPLTKESIR bmy_03579T0/1-252 ---------- --------LP GYYFDPEKKR YFRLLPGHNN CNPLTKESIR BACU010790/1-494 DEAPST-SST AGSSSVPDLP GYYFDPEKKR YFRLLPGHNN CNPLTKESIR 101 150 ENSTTRP00000011576/1-491 XXXXXXXXXX XXXXXXXXXX --ARLGFNAS SLLQKSKLGF LNVTSYCRLA ENSBTAP00000011481/1-498 QKEMERKRLR LLEEEEQQGK KIARLGFNAS SLLQKSKLGF LNATSYCRLA bmy_03579T0/1-252 QKEMESKRLQ LLEEEDKQGK ----VGSTAP GA-------- ------ALLA BACU010790/1-494 QKEMESKRLQ LLEEEDKQGK KIARLGFNAS SLLQKSKLGF LNVTSYCRLA 151 200 ENSTTRP00000011576/1-491 HELRVSCMQR KKVQIQSSDP SALASDRFNL ILADTNSDRL FTVNDVKVGG ENSBTAP00000011481/1-498 QELRVSCMQR KKVQIQSSDP SALASDQFNL IMADTNSDRL FTVNDVKVGG bmy_03579T0/1-252 HELRVSCMQR KKVQIQSSDP SALASDRFNL ILADTNSDRL FTVNDVKVGG BACU010790/1-494 HELRVSCMQR KKVQIQSSDP SALASDRFNL ILADTNSDRL FTVNDVKVGG 201 250 ENSTTRP00000011576/1-491 SKYGIINLRG LKTPTLRVHM HENLYFTNRK VNAVSWASLN HLDSHILLCL ENSBTAP00000011481/1-498 SKYGIISLHG LKTPTFRVHM HENLYFTNRK VNAMCWASLN HLDSHVLLCL bmy_03579T0/1-252 SKYGIINLHG LKTPTLRVHM HENLYFTNRK VNAVSWASLN HLDSHILLCL BACU010790/1-494 SKYGIINLHG LKTPTLRVHM HENLYFTNRK VNAVSWASLN HLDSHILLCL 251 300 ENSTTRP00000011576/1-491 MGIAETPGCA TLLPASLFVS SHP-GDRPGM LCSFRIPGAW SCAWSLNIQA ENSBTAP00000011481/1-498 MGIAETPGCA TLLPTSLFVS NHAAGDRPGM LCSFRIPGAW SCAWSLNIQA bmy_03579T0/1-252 MGIAETPGCA TLLPASLFVS SHPAGDRPGM LCSFRIPGAW SCAWSLNIQA BACU010790/1-494 MGIAETPGCA TLLPASLFVS SHPAGDRPGM LCSFRIPGAW SCAWSLNIQA 301 350 ENSTTRP00000011576/1-491 NNCFSTGLSR RVLVTSVVTG HRQSFGTSSD VLAQQFAVMA PLLFNGCRSG ENSBTAP00000011481/1-498 NNCFSTGLSR RVLVTSVVTG HRQSFGTSSD VLTQQFAVTA PLLFNGCRSG bmy_03579T0/1-252 NNCFSTGLSR RVLVTSVVTG HRQSFGTSSD VLAQQFAI-- ---------- BACU010790/1-494 NNCFSTGLSR RVLVTSVVTG HRQSFGTSSD VLAQQFAITA PLLFNGCRSG 351 400 ENSTTRP00000011576/1-491 EIFAIDLRCR NQGKGWKATR LLHDSAVTSV QILQEEQCLM ASDMAGTIKL ENSBTAP00000011481/1-498 EIFAIDLRCQ NQGKGWKATC LFHDSAVTSV QILQEEQCLM ASDMAGTIKL bmy_03579T0/1-252 ---------- ---------- ---------- ---------- ---------- BACU010790/1-494 EIFAIDLRCR NQGKGWKATH LFHDSAVTSV QILQEEQCLM ASDMAGTIKL 401 450 ENSTTRP00000011576/1-491 WDLRTTKCIR QYEGHVNEYA HLPLHVHEEE GIVVAVGQDC YTRIWSLHDA ENSBTAP00000011481/1-498 WDLRTTKCIR QYEGHVNEYA HLPLHVHEEE GIMVAVGQDC YTRIWSLHDG bmy_03579T0/1-252 ---------- ---------- ---------- ---------- ---------- BACU010790/1-494 WDLRTTKCIR QYEGHVNEYA HLPLHVHEEE GIVVAVGQDC YTRIWSLHDA 451 500 ENSTTRP00000011576/1-491 QLLRTIPSPH PTSKADIPSV AFSSRLGGFR GAPGLLMAIR QDLYCFSYS ENSBTAP00000011481/1-498 QLLRTIPSPY PTSKADIPSV AFSSRLGGAR GAPGLLMAVR QDLYCFSYS bmy_03579T0/1-252 ---------- ---------- ---------- ---------- --------- BACU010790/1-494 QLLRTIPSPH PTSKADIPSV AFSSRLGGFR GAPGLLMAIR QDLYCFSYS