KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:49 2014 Check: 00 .. Name: ENSBTAP00000011485/1-397 Len: 488 Check: 8236 Weight: 1.00 Name: ENSP00000415786/1-409 Len: 488 Check: 9156 Weight: 1.00 Name: bmy_18333T0/1-285 Len: 488 Check: 7173 Weight: 1.00 Name: BACU001402/1-443 Len: 488 Check: 764 Weight: 1.00 Name: ENSTTRP00000012718/1-398 Len: 488 Check: 8829 Weight: 1.00 // 1 50 ENSBTAP00000011485/1-397 ---------- ---------- ---------- ---------- ----MNWHFP ENSP00000415786/1-409 ---------- ---------- ---------- --MSDCRSSL VEGTMNWHLP bmy_18333T0/1-285 MPEAIIMQES TVQIDEVGAS HRIWPFVTKK TPPTSPMLSL PEGTMNWHFP BACU001402/1-443 ---------- ---------- ---------- ---------- ----MNWHFP ENSTTRP00000012718/1-398 ---------- ---------- ---------- ---------- ----MNWHFP 51 100 ENSBTAP00000011485/1-397 FFLVASVTLP SVCSQFNPLS LEELGSDTGI QVFNQIVKSQ PHDNIIISPH ENSP00000415786/1-409 LFLLASVTLP SICSHFNPLS LEELGSNTGI QVFNQIVKSR PHDNIVISPH bmy_18333T0/1-285 FFLVATVTLP SVCSQFNPLS LEELGSDTGI QVFNQIVKSR PHDNVVVSPH BACU001402/1-443 FFLVATVTLP FVCSQFNPLS LEELGSDTGI QVFNQIVKSR PHDNIVVSPH ENSTTRP00000012718/1-398 FFLVATVTLP SVCSQFNPLS LEELGSDTGI QVFNQIVKSR PHDNIVISPH 101 150 ENSBTAP00000011485/1-397 GIASVLGMLQ LGADGRTKKQ LTTVMRYGVN VVGLYPTIMQ DTIIGKFGEK ENSP00000415786/1-409 GIASVLGMLQ LGADGRTKKQ LAMVMRYGVN GVGKILKKIN KAIVSKKNKD bmy_18333T0/1-285 GIASVLGMLQ LGADGRTKKQ LTTVMRYGVN GVGKVLKKIN KAIVSKKNKD BACU001402/1-443 GIASVLGMLQ LGADGRTKKQ LTTVMRYGVN GVGKVLKKIN KAIVSKKNKD ENSTTRP00000012718/1-398 GIASILGMLQ LGADGRTKKQ LTTVMRYGVN GVGKVLKKIN KAIVSKKNKD 151 200 ENSBTAP00000011485/1-397 YMVLQRPVTL SLLQNKKLDF FFKNGFVFLK EVKVLSHPHS STLCSSFTCW ENSP00000415786/1-409 IVTVANAVFV KNASEIEVPF VTRNKDVFQC EVRNVNFEDP ASACDSINAW bmy_18333T0/1-285 IVTVANAVFV KNGFKMEVPF VTRNKDVFQC EVRNANFEDP TSACDSINVW BACU001402/1-443 IVTVANAVFV KNGFKMEVPF VTRNKDVFQC EVRNANFEDP ASACDSINVW ENSTTRP00000012718/1-398 IVTVANAVFV KNGFKMEVPF VTRNKDVFQC EVRNANFEDP ASACDSINVW 201 250 ENSBTAP00000011485/1-397 KHRRTKCMID SLLSPDLLNG VLTRLVLVNA VYFKGLWRSR FLPENTKKRT ENSP00000415786/1-409 VKNETRDMID NLLSPDLIDG VLTRLVLVNA VYFKGLWKSR FQPENTKKRT bmy_18333T0/1-285 VRNETRGMID NLLSPDLLDG VLTRLVLVNA VYFKGLWKSR FQPENTKKRT BACU001402/1-443 VRNETRGMID NLLSPDLLDG VLTRLVLVNA VYFKGLWKSR FQPENTKKRT ENSTTRP00000012718/1-398 VRNETRGMID NLLSPDLLDG VLTRLVLVNA VYFKGLWKSR FQPENTKKRT 251 300 ENSBTAP00000011485/1-397 FVAADGKSYQ VPMLAQLSVF RCGSTSTPSG LWYNFIELPY HGESISMLIA ENSP00000415786/1-409 FVAADGKSYQ VPMLAQLSVF RCGSTSAPND LWYNFIELPY HGESISMLIA bmy_18333T0/1-285 FVAADGKSYQ VPMLAQLSVF RCGTC----- ---------- ---------- BACU001402/1-443 FVAADGKSYQ VPMLAQLSVF RCGSTSTPSD LWYNFIELPY HGESISMLIA ENSTTRP00000012718/1-398 FVAADGKSYQ VPMLAQLSVF RCGSTSTPSD LWYNFIELPY HGESISMLIA 301 350 ENSBTAP00000011485/1-397 LPTESSVPLS AIVPHISTKT IDSWVSTMVP KRVQVILPKF TAVAQTDLKE ENSP00000415786/1-409 LPTESSTPLS AIIPHISTKT IDSWMSIMVP KRVQVILPKF TAVAQTDLKE bmy_18333T0/1-285 ---------- ---------- ---------- ---------- ---------- BACU001402/1-443 LPTESSTPLS AIIPHISTKT IDSWMSTMVP KRVQVILPKF TAVAQTDLKE ENSTTRP00000012718/1-398 LPTESSTPLS AIIPHISTKT IDSWMSTMVP KRVQVILPKF TAVAQTDLKE 351 400 ENSBTAP00000011485/1-397 PLKVLGITDM FDPSKANFAK ITR-SENLHV SHILQKAKIE VSEDGTKASA ENSP00000415786/1-409 PLKVLGITDM FDSSKANFAK ITR-SENLHV SHILQKAKIE VSEDGTKASA bmy_18333T0/1-285 ---------- ---------- ---------- --------VN FTVGGKRK-- BACU001402/1-443 PLKVLGITDM FDPSKANFAK ITR-SENLHV SHILQKAKIE VSEDGTKASA ENSTTRP00000012718/1-398 PLKVLGITDM FDPSKANFAK ITTGSENLHV SHILQKAKIE VSEDGTKASA 401 450 ENSBTAP00000011485/1-397 ATTAILIARS SPPWFIVDRP FLFFIRHNPT GAVLFMGQIN KP-------- ENSP00000415786/1-409 ATTAILIARS SPPWFIVDRP FLFFIRHNPT GAVLFMGQIN KP-------- bmy_18333T0/1-285 ---------- ---------- ---------- ---------- ---------- BACU001402/1-443 ATTAILIARS SPPWFIVDRP FLFFIRHNPT AIRHSSLPQH LPVYRSLREA ENSTTRP00000012718/1-398 ATTAILIARS SPPWFIVDRP FLFFIRHNPT GAVLFMGQIN KP-------- 451 500 ENSBTAP00000011485/1-397 ---------- ---------- ---------- -------- ENSP00000415786/1-409 ---------- ---------- ---------- -------- bmy_18333T0/1-285 ---------- ---------- ---------- -------- BACU001402/1-443 TVTVNPSLMS AVVPQVKYQC FYIPPTSYGH NDCLLNAD ENSTTRP00000012718/1-398 ---------- ---------- ---------- --------