KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:43:50 2014 Check: 00 .. Name: ENSBTAP00000011491/1-342 Len: 482 Check: 1926 Weight: 1.00 Name: ENSP00000404464/1-406 Len: 482 Check: 6780 Weight: 1.00 Name: bmy_15393T0/1-391 Len: 482 Check: 7797 Weight: 1.00 Name: ENSTTRP00000000117/1-363 Len: 482 Check: 9455 Weight: 1.00 // 1 50 ENSBTAP00000011491/1-342 ---------- ---------- ---------- ---------- ---------- ENSP00000404464/1-406 MVPPPPSRGG AARGQLGRSL GPLLLLLALG HTWTYREEPE DGDREICSES bmy_15393T0/1-391 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000117/1-363 ---------- ---------- ---------- ---------- ----EICSEN 51 100 ENSBTAP00000011491/1-342 ---------- --------CF SLRKKCCKGY KFVLGQCIPE DYDVCAEAPC ENSP00000404464/1-406 KIATTKYPCL KSSGELTTCY --RKKCCKGY KFVLGQCIPE DYDVCAEAPC bmy_15393T0/1-391 ---------- ----MLQEGM --RRKCCKGY KFVLGQCIPE DYDVCAEAPC ENSTTRP00000000117/1-363 KIVTTTYPCL KPSGELTTCF --RRKCCKGY KFVLGQCIPE DYDVCAEAPC 101 150 ENSBTAP00000011491/1-342 EQQCTDNFGR VLCTCYPGYR YDRERHRRRE KPYCLDIDEC ATSNETLCAH ENSP00000404464/1-406 EQQCTDNFGR VLCTCYPGYR YDRERHRKRE KPYCLDIDEC ASSNGTLCAH bmy_15393T0/1-391 EQQCTDNFGR VLCTCYPGYR YDRERHRRRE KPYCLDIDEC ATSNETLCAH ENSTTRP00000000117/1-363 EQQCTDNFGR VLCTCYPGYR YDRERHRRRE KPYCLDIDEC ATSSETLCMH 151 200 ENSBTAP00000011491/1-342 ICVNTVGSYR CECREGYVQE EDGRTCTKED KYPNDTGHDD EKVENAVRAA ENSP00000404464/1-406 ICINTLGSYR CECREGYIRE DDGKTCTRGD KYPNDTGH-- EKSENMVKAG bmy_15393T0/1-391 ICINTLGSYR CECREGYIQE DDGRTCTKGD KYPNDTGH-D EKAENAVRAG ENSTTRP00000000117/1-363 ICVNTLGSYR CECREGYVQE DDGRTCTKGD KYPNDTGH-D EKVENAVRAG 201 250 ENSBTAP00000011491/1-342 TCCATCKELH QVKQTVLQLK QKVALLPNSA ADLGKYITGH KALASNAYLP ENSP00000404464/1-406 TCCATCKEFY QMKQTVLQLK QKIALLPNNA ADLGKYITGD KVLASNTYLP bmy_15393T0/1-391 TCCATCKEFH QMKQTVLQLK QKIALLPNSA ADLGKYITGS ---------- ENSTTRP00000000117/1-363 TCCATCKEFH QMKQTVLQLK QKIALLPNSA ADLGKYITGD KVLASNAYIP 251 300 ENSBTAP00000011491/1-342 GPPGLPGGQG PPGSPGPKGS PGFPGIPGPP GQPGPRGSMG PVGPSPDLSH ENSP00000404464/1-406 GPPGLPGGQG PPGSPGPKGS PGFPGMPGPP GQPGPRGSMG PMGPSPDLSH bmy_15393T0/1-391 ---------- ----PGPKGS PGFPGIPGPP GQPGPRGSMG PMGPSPDLSH ENSTTRP00000000117/1-363 GPPGLPGGQG PPGSPGPKGS PGFPGIPGPP GQPGPRGSMG PMGPSPDLSH 301 350 ENSBTAP00000011491/1-342 IKQGRRGPVG PPGAPGRDGS KGERGAPGPR GSP------- ---------- ENSP00000404464/1-406 IKQGRRGPVG PPGAPGRDGS KGERGAPGPR GSP------- ---------- bmy_15393T0/1-391 IKQGRRGPVG PPGAPGRDGS KGERGAPGPR GSPVSSTACP TSPVQCAQGC ENSTTRP00000000117/1-363 IKQGRRGPVG PPGAPGRDGS KGERGAPGPR GSP------- ---------- 351 400 ENSBTAP00000011491/1-342 ---------- ---------- ---------- ---------- ---------- ENSP00000404464/1-406 ---------- ---------- ---------- ---------- ---------- bmy_15393T0/1-391 SSDAPVSWSY GQQSAPSSCH SACPQRTPWL EEESQKPLAA ANLYLECLLL ENSTTRP00000000117/1-363 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000011491/1-342 -----GPPGS FDFLLIVLAE IRNDITELQE QVFGRRTHSS AEESPSPQEL ENSP00000404464/1-406 -----GPPGS FDFLLLMLAD IRNDITELQE KVFGHRTHSS AEEFPLPQEF bmy_15393T0/1-391 RFKTPGPPGS FDFLLLMLAD IRNDIAELQE KVFGHRTHSS AEEFPLPQEF ENSTTRP00000000117/1-363 -----GPPGS FDFLLLMLAD IRNDITELQE KVFGHRTDSS AEEFPLPQEL 451 500 ENSBTAP00000011491/1-342 PSYPETLDMG SGDDAPGRTE TRASGAARDF YP ENSP00000404464/1-406 PSYPEAMDLG SGDDHPRRTE TRDLRAPRDF YP bmy_15393T0/1-391 SSSPETMDFG SGDDNPKRTE TRDLGTHRDF YP ENSTTRP00000000117/1-363 SSSPETMDFG SGDDNPKRTE TRDLGTHRDF YP