KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:43:51 2014 Check: 00 .. Name: ENSP00000347924/1-337 Len: 337 Check: 856 Weight: 1.00 Name: ENSTTRP00000000172/1-300 Len: 337 Check: 5262 Weight: 1.00 Name: bmy_08520T0/1-295 Len: 337 Check: 2688 Weight: 1.00 Name: ENSBTAP00000011502/1-313 Len: 337 Check: 1534 Weight: 1.00 // 1 50 ENSP00000347924/1-337 MSLEQEEETQ PGRLLGRRDA VPAFIEPNVR FWITERQSFI RRFLQWTELL ENSTTRP00000000172/1-300 ---------- ---------- ---------- -------SFI QRFLQWTELL bmy_08520T0/1-295 ---------- ---------- ----MEPNVR FWITERQSFI QRFLQWTELL ENSBTAP00000011502/1-313 ---------- ---------- ----MEPNVR FWITERQSFI QRFLQWTELL 51 100 ENSP00000347924/1-337 DPTNVFISVE SIENSRQLLC TNEDVSSPAS ADQRIQEAWK RSLATVHPDS ENSTTRP00000000172/1-300 DPTNLVVSIE KIEKSRQLLL THEDASGSDL EDKRVQEAWK RSLSTVHPDS bmy_08520T0/1-295 DPTNLVVSIE KIEKSRQLLL THEDASRSDL EDKRVQEAWK RSLSTVHPDN ENSBTAP00000011502/1-313 DPTNLVLSIE KIEKSRQLLL TNEDASRGDL EDKRIQEAWK RSLSTVHPDN 101 150 ENSP00000347924/1-337 SNLIPKLFRP AAFLPFMAPT VFLSMTPLKG IKSVILPQVF LCAYMAAFNS ENSTTRP00000000172/1-300 SKLIPGPFRP AALLPFTAPM XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08520T0/1-295 SKLIPGPFRP AALLPFTAPM V--------- ---------S FYTYSTVFNI ENSBTAP00000011502/1-313 SRLIPGPFRP AALLPFTAPT LFLSMLPVKS LKSMILPQAS FYTYSTAFNI 151 200 ENSP00000347924/1-337 INGNRSYTCK PLERSLLMAG AVASSTFLGV IPQFVQMKYG LTGPWIKRLL ENSTTRP00000000172/1-300 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXL FPRLLQVRFS LNSILSRNVI bmy_08520T0/1-295 VNGNASYDRR PHESILLGAG VIASSTFFGL FPRLLQVRFS LNSILSRNVI ENSBTAP00000011502/1-313 VNGNASYDRR AHESLLLGAG VIVSSTFLGL FPRLLQVRLS MNSVLSRNFI 201 250 ENSP00000347924/1-337 PVIFLVQASG MNVYMSRSLE SIKGIAVMDK EGNVLGHSRI AGTKAVRETL ENSTTRP00000000172/1-300 PVVILAQLSG MNVVASRSLE PLRGIEVMDK EGSVIGYSRK AGTKAVKDTA bmy_08520T0/1-295 PVVILAQLSG LNVVASRSLE PLRGIEVMDK EGSVIGYSRK AGTKAIKDTA ENSBTAP00000011502/1-313 PVIILAQLSG MNVIASRSLE PMRGIEVMDK EGNVIGYSRK AGTKAVKDTA 251 300 ENSP00000347924/1-337 ASRIVLFGTS ALIPEVFTYF FKRTQYFRKN PGSLWILKLS CTVLAMGLMV ENSTTRP00000000172/1-300 TSRVVLFGTS AFIPEVFSYF FKRTQFFLQC PWSLWTLKLS CTILVMGLMV bmy_08520T0/1-295 TSRVVLFGTS AFIPEVFSYF FKRTQFFLQC PWSLWTLKLS CTILVMGLMV ENSBTAP00000011502/1-313 TSRVVLFGTS AFIPEVFAYF FKRTQFFLQN PWSLWTLKLS CTVLVMGLMV 301 350 ENSP00000347924/1-337 PFSFSIFPQI GQIQYCSLEE KIQSPTEETE IFYHRGV ENSTTRP00000000172/1-300 PVSFSVFPQI GRIQCSELEK EIQSATEETE LFYNRGV bmy_08520T0/1-295 PVSFSVFPQI GRIQCSELEK EIQSATEETE LFYNRGV ENSBTAP00000011502/1-313 PVSFSVFPQI GRIQCNELEK EIQSATEETE LFYNRGV