KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:51 2014 Check: 00 .. Name: ENSP00000364847/1-834 Len: 841 Check: 5306 Weight: 1.00 Name: ENSBTAP00000011507/1-785 Len: 841 Check: 3947 Weight: 1.00 Name: BACU013008/1-785 Len: 841 Check: 2663 Weight: 1.00 Name: bmy_21642T0/1-773 Len: 841 Check: 6007 Weight: 1.00 Name: ENSTTRP00000002285/1-840 Len: 841 Check: 4270 Weight: 1.00 // 1 50 ENSP00000364847/1-834 MAQKMDCGAG LLGFQNPDAC RAVCHPLPQP PASTLPLSAF PTLCDPPYSQ ENSBTAP00000011507/1-785 MSEKMDCGAG LLGFQ----- ---------- ---------- ---------- BACU013008/1-785 MSQKMDCGAG LLGFQ----- ---------- ---------- ---------- bmy_21642T0/1-773 MSQKMDCGAG LLGFQ----- ---------- ---------- ---------- ENSTTRP00000002285/1-840 MSQKMDCGAG LLGFQSPEAC RALRRPLPQP PASTLPFSAL PTPCDPLSPQ 51 100 ENSP00000364847/1-834 LRDPPAVLSC YCTPLGASPA PAEASVEDSA LLMQTLMEAI QISEAPPTNQ ENSBTAP00000011507/1-785 ---------- ---------- -AEASVEDST LLMQTLMEAI QISEAPPTSQ BACU013008/1-785 ---------- ---------- -AEASVEDST LLMQTLMEAI QISEAPPTNQ bmy_21642T0/1-773 ---------- ---------- -AEASVEDST LLMQTLMEAI QISEAPPTNQ ENSTTRP00000002285/1-840 LLNPPPLLSS NLTPPRSAP- PAEASVEDST LLMQTLMEAI QISEAPPTNQ 101 150 ENSP00000364847/1-834 ATAA-----A SPQSSQPPTA NEMADIQVSA AAARPKSAFK VQNATTKGPN ENSBTAP00000011507/1-785 ATAAASAPNA SPQSSQPPAV SEMADTQALA TATKPKTAFK VQNATTKGPN BACU013008/1-785 ATAAASAPNA SPQSSQSPTA NEMADMQALA AATKPKTAFK AQNATTKGPS bmy_21642T0/1-773 ATAAASAPNA SPQSSQSPTA SEMADMQALA AATKPKTAIK AQNATTKGPN ENSTTRP00000002285/1-840 ATAAASAPNA SPQSSQSPTA SEMADMQALA AATKPKTAFK AQNATTKGPN 151 200 ENSP00000364847/1-834 GVYDFSQAHN AKDVPNTQPK AAFKSQNATP KGPNAAYDFS QAATTGELAA ENSBTAP00000011507/1-785 AAYDFSQAFN AKETPNILPT AHFKSQNAPA KGPNAAYDFS QAAPTGELTA BACU013008/1-785 AAYDFSQALN AKETPNTPPT AAFKSQNAPP KGPNAAYDFS QAATTSELTA bmy_21642T0/1-773 AAYDFSQALN AKETPNTPPT AAFKSQNAPP KGPNAAYDFS QAATTSELTA ENSTTRP00000002285/1-840 AAYDFSQALN AKETPNTPPT AAFKSQNAPP KGPNAAYDFS QAATTSELTA 201 250 ENSP00000364847/1-834 NKSEMAFKAQ NATTKVGPNA TYNFSQSLNA NDLANSRPKT PFKAWNDTTK ENSBTAP00000011507/1-785 NKSDMAFKAQ NTTTKVVPNA AYNFSQSLNA SEMVNPQPKT AFKAWNDTTT BACU013008/1-785 NKSEMAFKAQ NTTTTVGPNA TYNFSQSLSA SEMVNTHPKT AFKAWNDTTK bmy_21642T0/1-773 NKSEMAFKAQ NTTTTVGPNA TYNFSQSLSA SEMVNTHPKT AFKAWNDTTK ENSTTRP00000002285/1-840 NKSEMAFKAQ NTTTTVGPNA TYNFSQSLSA SEMVSTQPKT AFRAWNDTTK 251 300 ENSP00000364847/1-834 APTADTQTQN VNQAKMATSQ ADIETD--PG ISEPDGATAQ TSADGSQAQN ENSBTAP00000011507/1-785 APTADPQTQN VNPAKMATSH TDIEADPSPG ICESDGAAAQ TSADGSQAQN BACU013008/1-785 APVADTQTQN GNQAKIATSQ ADIEADPCPS ICESDGAAAQ TSADGSQAQN bmy_21642T0/1-773 APVADTQTQN VNQAKIATSQ ADIEADPCPS ICESDGAAAQ TSADGSQAQN ENSTTRP00000002285/1-840 APVADTQTQN VNQAKIATSQ ADIEADPCPG ICESDGAAAQ TSADGSQAQN 301 350 ENSP00000364847/1-834 LESRTIIRGK RTRKINNLNV EENSSGDQRR APLAAGTWRS APVPVTTQNP ENSBTAP00000011507/1-785 LESRTIIRGK RTRKINNLNV EESSSGDQRR APLAPGTWRS APVPVTTQSP BACU013008/1-785 LESRTIIRGK RTRKINNLNV EESSSGDQRQ DPLAPGTWRS APVPVTTQSP bmy_21642T0/1-773 LESRTIIRGK RTRKINNLNV EESSSGDQRR APLAPGTWRS APVPVTTQSP ENSTTRP00000002285/1-840 LESRTIIRGK RTRKINNLNV EESSSGDQRR APLAPGTWRS APVPVTTQSP 351 400 ENSP00000364847/1-834 PGAPPNVLWQ TPLAWQNPSG WQNQTARQTP PARQSPPARQ TPPAWQNPVA ENSBTAP00000011507/1-785 PGAPPNVLWQ TPLAWQNPSG WQNQPTRQTP PARQSPPTRQ TPPAWQNPVA BACU013008/1-785 PGAPPNVLWQ TPLAWQNPSG WQNQPARQTP PARQSPPARQ TPPAWQNPVA bmy_21642T0/1-773 PGAPPNVLWQ TPLAWQNPSG WQNQPARQTP PARQSPPARQ TPPAWQNPVA ENSTTRP00000002285/1-840 PGAPPNVLWQ TPLAWQNPSG WQNQPARQTP PARQSPPARQ TPPAWQNPVA 401 450 ENSP00000364847/1-834 WQNPVIWPNP VIWQNPVIWP NPIVWPGPVV WPNPLAWQNP PGWQTPPGWQ ENSBTAP00000011507/1-785 WQNPVIWPNP VIWQNPVIWP NPIVWPGPVV WPNPLAWQNP PGWQTPPGWQ BACU013008/1-785 WQNPVIWPNP VIWQNPVIWP NPIVWPGPVV WPNPLAWQNP PGWQTPPGWQ bmy_21642T0/1-773 WQNPVIWPNP VIWQNPVIWP NPIVWPGPVV WPNPLAWQNP PGWQTPPGWQ ENSTTRP00000002285/1-840 WQNPVIWPNP VIWQNPVIWP NPIVWPGPVV WPNPLAWQNP PGWQTPPGWQ 451 500 ENSP00000364847/1-834 TPPGWQGPPD WQGPPDWPLP PDWPLPPDWP LPTDWPLPPD WIPADWPIPP ENSBTAP00000011507/1-785 TPPGWQGPPD WQGPPDWPLP PDWPLPPDWP LPADWPLPPD WIPTDWPVPP BACU013008/1-785 TPPGWQGPPG WQGPPDWPLP PDWPLPPDWP LPTDWPLPPD WIPTDWPVPP bmy_21642T0/1-773 TPPGWQGPPD WQGPPDWPLP PDWPLPPDWP LPTDWPLPPD WIPTDWPVPP ENSTTRP00000002285/1-840 TPPGWQGPPD WQGPPDWPLP PDWPLPPDWP LPTDWPLPPD WIPTDWPVPP 501 550 ENSP00000364847/1-834 DWQNLRPSPN LRPSPNSRAS QNPGAAQPRD VALLQERANK LVKYLMLKDY ENSBTAP00000011507/1-785 DWQNLRPSPN LRPSPNSRAS QNLGASQPRD VALLQERANK LVKYLMLKDY BACU013008/1-785 DWQNLRPSPN LRPSPNSRAS QNLGASQPRD VALLQERANK LVKYLMLKDY bmy_21642T0/1-773 DWQNLRPSPN LRPSPNSRAS QNLGASQPRD VALLQERANK LVKYLMLKDY ENSTTRP00000002285/1-840 DWQNLRPSPN LRPSPNSRAS QNLGASQPRD VALLQERANK LVKYLMLKDY 551 600 ENSP00000364847/1-834 TKVPIKRSEM LRDIIREYTD VYPEIIERAC FVLEKKFGIQ LKEIDKEEHL ENSBTAP00000011507/1-785 TKVPIKRSEM LRDIIREYTD VYPEIIERAC FVLEKKFGIQ LKEIDKEEHL BACU013008/1-785 TKVPIKRSEM LRDIIREYTD VYPEIIERAC FVLEKKFGIQ LKEIDKEEHL bmy_21642T0/1-773 TKVPIKRSEM LRDIIREYTD VYPEIIERAC FVLEKKFGIQ LKEIDKEEHL ENSTTRP00000002285/1-840 TKVPIKRSEM LRDIIREYTD VYPEIIERAC FVLEKKFGIQ LKEIDKEEHL 601 650 ENSP00000364847/1-834 YILISTPESL AGILGTTKDT PKLGLLLVIL GVIFMNGNRA SEAVLWEALR ENSBTAP00000011507/1-785 YILISTPESL AGILGTTKDT PKLGLLLVIL GVIFMNGNRA SEAVLWEALR BACU013008/1-785 YILISTPESL AGILGTTKDT PKLGLLLVIL GVIFMNGNRA SEAVLWEALR bmy_21642T0/1-773 YILISTPESL AGILGTTKDT PKLGLLLVIL GVIFMNGNRA SEAVLWEALR ENSTTRP00000002285/1-840 YILISTPESL AGILGTTKDT PKLGLLLVIL GVIFMNGNRA SEAVLWEALR 651 700 ENSP00000364847/1-834 KMGLRPGVRH PLLGDLRKLL TYEFVKQKYL DYRRVPNSNP PEYEFLWGLR ENSBTAP00000011507/1-785 KMGLRPGVRH PLLGDLRKLL TYEFVKQKYL DYRRVPNSNP PEYEFLWGLR BACU013008/1-785 KMGLRPGVKH PLLGDLRKLL TYEFVKQKYL DYRRVPNSNP PEYEFLWGLR bmy_21642T0/1-773 KMGLRPGVRH PLLGDLRKLL TYEFVKQKYL DYRRVPNSNP PEYEFLWGLR ENSTTRP00000002285/1-840 KMGLRPGVRH PLLGDLRKLL TYEFVKQKYL DYRRVPNSNP PEYEFLWGLR 701 750 ENSP00000364847/1-834 SYHETSKMKV LRFIAEVQKR DPRDWTAQFM EAADEALDAL DAAAAEAEAR ENSBTAP00000011507/1-785 SYHETSKMKV LRFIAEVQKR DPRDWTAQFM EAADEALDAL DAAAAEAEAR BACU013008/1-785 SYHETSKMKV LRFIAEVQKR DPRDWTAQFM EAADEALDAL DAAAAEAEAR bmy_21642T0/1-773 SYHETSKMKV LRFIAE---- --------FM EAADEALDAL DAAAAEAEAR ENSTTRP00000002285/1-840 SYHETSKMKV LRFIAEVQKR DPRDWTAQFM EAADEALDAL DAAAAEAEAR 751 800 ENSP00000364847/1-834 AEARTRMGIG DEAVSGPWSW DDIEFELLTW DEEGDFGDPW SRIPFTFWAR ENSBTAP00000011507/1-785 AEARTRMGIG DEAVSGPWSW DDIEFELLTW DEEGDFGDPW SRIPFTFWAR BACU013008/1-785 AEARTRMGIG DEAVSGPWSW DDIEFELLTW DEEGDFGDPW SRIPFSFWAR bmy_21642T0/1-773 AEARTRMGIG DEAVSGPWSW DDIEFELLTW DEEGDFGDPW SRIPFTFWAR ENSTTRP00000002285/1-840 AEARTRMGIG DEAVSGPWSW DDIEFELLTW DEEGDFGDPW SRIPFTFWAR 801 850 ENSP00000364847/1-834 YHQNARSRFP QTFAGPIIGP GGTASANFAA NFGAIGFFWV E ENSBTAP00000011507/1-785 YHQNARSRFP QTFAGPIIGP GGTASANFAA NFGAIGFFWV E BACU013008/1-785 YHQNARSRFP QTFAGPIIGP GGTASANFAA NFGAIGFFWV E bmy_21642T0/1-773 YHQNARSRFP QTFAGPIIGP GGTASANFAA NFGAIGFFWV E ENSTTRP00000002285/1-840 YHQNARSRFP QTFAGPIIGP GGTASANFAA NFGAIGFFWV E