KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:43:52 2014  Check: 00 ..

 Name: bmy_05406T0/1-148         Len:    176  Check:  4228  Weight:  1.00
 Name: ENSP00000359295/1-176     Len:    176  Check:  4394  Weight:  1.00
 Name: ENSTTRP00000006608/1-176  Len:    176  Check:  4394  Weight:  1.00
 Name: ENSBTAP00000011514/1-176  Len:    176  Check:  4394  Weight:  1.00
 Name: BACU002805/1-98           Len:    176  Check:  9206  Weight:  1.00

//


                          1                                                   50
bmy_05406T0/1-148         MQGFNG---- ----RNKAGK TVDENSL--- ---------- --IYEIIKVV 
ENSP00000359295/1-176     MASSSGNDDD LTIPRAAINK MIKETLPNVR VANDARELVV NCCTEFIHLI 
ENSTTRP00000006608/1-176  MASSSGNDDD LTIPRAAINK MIKETLPNVR VANDARELVV NCCTEFIHLI 
ENSBTAP00000011514/1-176  MASSSGNDDD LTIPRAAINK MIKETLPNVR VANDARELVV NCCTEFIHLI 
BACU002805/1-98           MASSSGNDDD LTIPRAAINK MIKETLPNVR VANDARELVV NCCTEFIHLI 


                          51                                                 100
bmy_05406T0/1-148         SHSK---CLK N--HSLYGNV DFKALESLGF GSYISEVKEV LQECKTVALK 
ENSP00000359295/1-176     SSEANEICNK SEKKTISPEH VIQALESLGF GSYISEVKEV LQECKTVALK 
ENSTTRP00000006608/1-176  SSEANEICNK SEKKTISPEH VIQALESLGF GSYISEVKEV LQECKTVALK 
ENSBTAP00000011514/1-176  SSEANEICNK SEKKTISPEH VIQALESLGF GSYISEVKEV LQECKTVALK 
BACU002805/1-98           SSEANEICNK SEKKTISPEH VIQAVTF--- -EYYCVLGTV LDTAKDIKM- 


                          101                                                150
bmy_05406T0/1-148         RRKASSRLEN LGIPEEELLR QQQELFAKAR QQQAELAQQE WLQMQQAAQQ 
ENSP00000359295/1-176     RRKASSRLEN LGIPEEELLR QQQELFAKAR QQQAELAQQE WLQMQQAAQQ 
ENSTTRP00000006608/1-176  RRKASSRLEN LGIPEEELLR QQQELFAKAR QQQAELAQQE WLQMQQAAQQ 
ENSBTAP00000011514/1-176  RRKASSRLEN LGIPEEELLR QQQELFAKAR QQQAELAQQE WLQMQQAAQQ 
BACU002805/1-98           ---------- ---------- ---------- ---------- ---------- 


                          151                                                200
bmy_05406T0/1-148         AQLAAASASA SNQAGSSQDE EDDDDI 
ENSP00000359295/1-176     AQLAAASASA SNQAGSSQDE EDDDDI 
ENSTTRP00000006608/1-176  AQLAAASASA SNQAGSSQDE EDDDDI 
ENSBTAP00000011514/1-176  AQLAAASASA SNQAGSSQDE EDDDDI 
BACU002805/1-98           ---------- ---------- ---NDI