KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:52 2014 Check: 00 .. Name: ENSP00000342313/1-681 Len: 824 Check: 3230 Weight: 1.00 Name: ENSBTAP00000011517/1-666 Len: 824 Check: 5502 Weight: 1.00 Name: ENSTTRP00000002988/1-673 Len: 824 Check: 6966 Weight: 1.00 Name: bmy_10002T0/1-668 Len: 824 Check: 2200 Weight: 1.00 Name: BACU001194/1-800 Len: 824 Check: 1046 Weight: 1.00 // 1 50 ENSP00000342313/1-681 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011517/1-666 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002988/1-673 ---------- ---------- ---------- ---------- ---------- bmy_10002T0/1-668 ---------- ---------- ---------- ---------- ---------- BACU001194/1-800 MELLPSHVCA ATAGYEALLA PPLRAPRAYL SLHEAAPHLH LPRDPLALER 51 100 ENSP00000342313/1-681 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011517/1-666 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002988/1-673 ---------- ---------- ---------- ---------- ---------- bmy_10002T0/1-668 ---------- ---------- ---------- ---------- ---------- BACU001194/1-800 FSATAAAASD FQPLLDNGEP CIEVECGANR ALLYVRKLCQ GSKGPSIRHR 101 150 ENSP00000342313/1-681 ---------- ---------- ---------- -----MSKGI LQVHPPICDC ENSBTAP00000011517/1-666 ---------- ---------- ---------- -----MSKGI LQVHPPICDC ENSTTRP00000002988/1-673 ---------- ---------- ---------- -----MSKGI LQVHPPICDC bmy_10002T0/1-668 ---------- ---------- ---------- -----MSKGI LQVHPPICDC BACU001194/1-800 GEWLTPNEFQ FVSGRETAKD WKRSIRHKGK SLKTLMSKGI LQVHPPICDC 151 200 ENSP00000342313/1-681 PGCRISSPVN RGRLADKRTV ALPAARNLKK ERTPSFSASD GDSDGSGPTC ENSBTAP00000011517/1-666 PGCRISSPVN RGRLADKRTV ALPPARILKK ELTPSFSASD GDSDGSGPAC ENSTTRP00000002988/1-673 PGCRISSPVN RGRLADKRTV ALPPARVLKK ELTPSFSAS- SDSDRSGPAC bmy_10002T0/1-668 PGCRISSPVN RGRLADKRTV ALPPARVLKK ELTPSFSAS- GDSDRSGPAC BACU001194/1-800 PGCRISSPVN RGRLADKRTV ALPPARVLKK ELTPSFSAS- GDSDRSGPAC 201 250 ENSP00000342313/1-681 GRRPGLKQED GPHIRIMKRR VHTHWDVNIS FREASCSQDG NLPTLISSVH ENSBTAP00000011517/1-666 GQRLGLKQED EPHVHIMKRR VHTHWDVNIS FRETSCSQDS DLPTLISSVH ENSTTRP00000002988/1-673 GQRLGLKQED DPHVRIMKRX XXXXXXXXXX XXXXXXXQDS DLPTLISSLR bmy_10002T0/1-668 GQRLGLKQED DPHVRIMKRR VHTHWDVNIS FRETSCSQDG DLPTLISSVH BACU001194/1-800 GQRLGLKQED DPHVRIMKRR VHTHWDVNIS FRETSCSQDG DLPTLISSVH 251 300 ENSP00000342313/1-681 RSRHLVMPEH QSRCEFQRGS LEIGLRPAGD LLGKRLGRSP RISSDCFSEK ENSBTAP00000011517/1-666 RSRHLVMPEH QSRCEFQRGS VEIGLGAAGD LLGKRLGRSP HISSDCPLEK ENSTTRP00000002988/1-673 RSRHLVMPEH QSRCEFQRGS VEVGLGAAGD LLGKRLGRSP HISGDCPSEK bmy_10002T0/1-668 RSRHLVMPEH QSRCEFQRGG VEVGLGAAGD LLGKRLGRSP HISSDCPSEK BACU001194/1-800 RSRHLVMPEH QSRCEFQRGG VEVGLGAAGD LLGKRLGRSP HISSDCPSEK 301 350 ENSP00000342313/1-681 RARSESPQ-- -EALLLPREL GPSMAPEDHY RRLVSALSEA STFEDPQRLY ENSBTAP00000011517/1-666 KARSKSPQAN PETLLLP-EL GPSMAPEDHY RRLVSALSEA STFEDPQRLY ENSTTRP00000002988/1-673 KARSKSPQ-- -EGPLLP-EL GPGMAPEDHY RRLVSALSEA GTFEDPQRLY bmy_10002T0/1-668 KARSKSPQ-- -EALLLP-EL GPGMAPEDHY RRLVSALSEA GTFEDPQRLY BACU001194/1-800 KARSKSPQ-- -EGLLLP-EL GPGMAPEDHY RRLVAALSEA GTFEDPQRLY 351 400 ENSP00000342313/1-681 HLGLPSHGED PPWHDPPHHL PSHDLLRVRQ EVAAAALRGP SGLEAHLPSS ENSBTAP00000011517/1-666 HLGLPSHA-- ---------- ---DLLRVRQ EVAAAAARSP SGLEVHLPSS ENSTTRP00000002988/1-673 HLGLPGHGMA PPQHESHV-- ---HLLRVRQ EVAAAAARSP SGLEVHLPSS bmy_10002T0/1-668 HLGLPGH--- ---------- ---DLLRVRQ EVAAAAVRSP SGLEVHLPSS BACU001194/1-800 HLGLPGH--- ---------- ---DLLRVRQ EVAAAAVRSP SGLEAHLPSS 401 450 ENSP00000342313/1-681 TAGQRRKQGL AQHREGAAPA AAPSFSEREL PQPPPLLSPQ NAPHVALGPH ENSBTAP00000011517/1-666 TAGQRRKQSL AQHRDATGPA G-------EL SQPPPLLSPQ NAPHIALGPH ENSTTRP00000002988/1-673 TAGQRRKQGL AQHRDVTAPA GAPSFSEREL SQPPPLLSPQ NAPHIALGPH bmy_10002T0/1-668 TAGQRRKQGL AQHRDGTAPA GAPSFSEREL SQPPPLLSPQ NAPHIALGPH BACU001194/1-800 TAGQRRKQGL AQHRDGTAPA GAPSFSEREL SQPPPLLSPQ NAPHIALGPH 451 500 ENSP00000342313/1-681 LRPPFLGVPS ALCQTPGYGF LPPAQAEMFA WQQELLRKQN LARLELPADL ENSBTAP00000011517/1-666 LRPPFLGVPS ALCQTPGYGF LPPAQAEMFA RQQELLRKQN LARLEMSAEL ENSTTRP00000002988/1-673 IRPPYLGVPS ALCQTPGYGF LPPAQAEMLA RQQELLRKQN LARLEMSAEL bmy_10002T0/1-668 LRPPFLGVPS ALCQTPGYGF LPPAQAEMLA RQQELLRKQN LARLEMSAEL BACU001194/1-800 LRPLFLGVPS ALCQTPGYGF LPPAQAEMLA RQQELLRKQN LARLEMSAEL 501 550 ENSP00000342313/1-681 LRQKELESA- RPQLLAPETA LRPNDGAEEL QRRGALLVLN HGAAPLLALP ENSBTAP00000011517/1-666 LRQKELESSH RPQLLAPEAA LRPPDGAEEL QRRGAMLVLR HSSAPLLALP ENSTTRP00000002988/1-673 LRQKELESAH RPQLLAPEAA LRPPDGAEEL QRRGAMLVLR HSSAPLLALP bmy_10002T0/1-668 LRQKELESAH RPQLLAPEAA LRPPDGAEEL QRRGAMLVLR HSSAPLLALP BACU001194/1-800 LRQKELESAH RPQL---GAA LPPPDGAEEL QRRGAMLVLR HSSAPLLALP 551 600 ENSP00000342313/1-681 PQGPPGSGPP TPSRDSARRA PRKGGPGPAS ARPSESKEMT GARLWAQDGS ENSBTAP00000011517/1-666 PQGPPGPGPP TPPREPARRA PRKGGPSPAS GRPNESKETT GAGLWAPDGS ENSTTRP00000002988/1-673 PQGPPGPGPP TPPQEPARRA PRKGGPSPAS ARPSEPKETT GAGLWAQDGS bmy_10002T0/1-668 PQGPPGPGPP TPPREPARRA PRKGGPSPAS TRPSEPKEIT GAGLWAQDGS BACU001194/1-800 PQGPPGPGPP TPPREPARRA PRKGGPSPAS ARPSEPKEIT GVGLWAQDSS 601 650 ENSP00000342313/1-681 EDEPPKDSDG EDPETAAVGC RGPTPGQAPA GGAGAEGKGL FPGST----L ENSBTAP00000011517/1-666 EDEPPKDSDG EDSEMVAAGG QAPHPGQAPP GGASSEGKGL LSGSMLPPPL ENSTTRP00000002988/1-673 EDEPPKDSDG EDPEMVAAGG QG------PT GGASSEGKGL ASGSMLPPPL bmy_10002T0/1-668 EDEPPKDSDG EDPEMVAAGG QGPIPGQAPT GGASSEGKGL ASGSMLPPPL BACU001194/1-800 EDEPPKDSDG EDPEMVAAGG QGPIPGQAPT GGASSEGKGL ASGSMLPPPL 651 700 ENSP00000342313/1-681 PLGFPYAVSP YFHTGAVGGL SMDGEEAPAP EDVTKWTVDD VCSFVGGLSG ENSBTAP00000011517/1-666 PLGLPYTVSP FFHTGTMGGL FMDGEEATAP EDVSKWTVDD VCSFVGGLSG ENSTTRP00000002988/1-673 PLGLPYTVSP YFHTGATGGL FMDGEGATAP EDVSKWTVDD VCSFVGGLSG bmy_10002T0/1-668 PLGLPYTVSP YFHTGAMGGL FMEGEEATAP EDVSKWTVDD VCSFVGGLSG BACU001194/1-800 PLGLPYTVSP YFHTGAMGGL FMDGEEATAP EDVSKWTVDD VCSFVGGLSG 701 750 ENSP00000342313/1-681 CGEYTRVFRE QGIDGETLPL LTEEHLLTNM GLKLGPALKI RAQVARRLGR ENSBTAP00000011517/1-666 CGEYAPVFRE QGIDGETLPL LTEEHLLTTM GLKLGPALKI RAQVAKRLGR ENSTTRP00000002988/1-673 CGEYAPVFRE QGIDGETLPL LTEEHLLTTM GLKLGPALKI RAQVAKRLGR bmy_10002T0/1-668 CGEYAPVFRE QGIDGETLPL LTEEHLLTTM GLKLGPALKI RAQVAKRLGR BACU001194/1-800 CGEYAPVFRE QGIDGETLPL LTEEHLLTTM GLKLGPALKI RAQVAKRLGR 751 800 ENSP00000342313/1-681 VFYVASFPVA LPLQPPTLRA PERELGTGEQ PLSPTTATSP YGGGHALAGQ ENSBTAP00000011517/1-666 VFYMASFPVA LPLQPPTARP PERELSSGEQ PLSPALAPSP YGGVHPPASR ENSTTRP00000002988/1-673 VFYMASFPVA LPLQPPTLRA PERELNSGEQ PLSPAPAPSP YGGAQPPASR bmy_10002T0/1-668 VFYMASFPVA LPLQPPTLRA PERELNSGEQ PLSPAPAPSP YGGAQPPAGR BACU001194/1-800 VFYMASFPVA LPLQPPTLRA PERELNSGEQ PLSPAPAPSP YGGAQPPAGR 801 850 ENSP00000342313/1-681 TSPKQENGTL ALLPGAPDPS QPLC ENSBTAP00000011517/1-666 TSPKHENGTM TLLPGPADPS QSLC ENSTTRP00000002988/1-673 ASPKQENGTM ALLPGPTDPS QPLC bmy_10002T0/1-668 ASPKQENGTM ALLPGPADPS QPLC BACU001194/1-800 ASPKQENGTM ALLPGPADPS QPLC