KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:43:53 2014 Check: 00 .. Name: bmy_05733T0/1-504 Len: 766 Check: 751 Weight: 1.00 Name: ENSBTAP00000011521/1-520 Len: 766 Check: 9939 Weight: 1.00 Name: BACU003456/1-766 Len: 766 Check: 4933 Weight: 1.00 Name: ENSTTRP00000009905/1-468 Len: 766 Check: 3380 Weight: 1.00 // 1 50 bmy_05733T0/1-504 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011521/1-520 ---------- ---------- ---------- ---------- ---------- BACU003456/1-766 MAEVLAVLYW ELSTLGDPLA GVAYSCLAHY LPSSFAIQPG ATNIESSIRE ENSTTRP00000009905/1-468 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_05733T0/1-504 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011521/1-520 ---------- ---------- ---------- ---------- ---------- BACU003456/1-766 EDGFYVINGH KWWISEEAVN PGRIRGSMSV TRYPGSSLSA LRVYAKNDSH ENSTTRP00000009905/1-468 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_05733T0/1-504 ---------- ---------- ---------- ---MLRAVVL AAAR--PCQG ENSBTAP00000011521/1-520 ---------- ---------- ---------- ---MLRAVAL AAARLGPRQG BACU003456/1-766 HQQQSVFLVP TDTLGIKIIQ SLTVYGLEDA PGWPSRGGSP FCVRLGLSLQ ENSTTRP00000009905/1-468 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_05733T0/1-504 RRLLSAAATP AVPAPNQQPE VFYNK----- ---------- ---------- ENSBTAP00000011521/1-520 RRLLSA-ATQ AVPTPNQQPE VLYNQ----- ---------- ---------- BACU003456/1-766 KRLWAVLAPA QGVTPAKSRV AFAKPLVEQG TVLADIAQSR VEIEQARLLV ENSTTRP00000009905/1-468 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_05733T0/1-504 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011521/1-520 ---------- ---------- ---------- ---------- ---------- BACU003456/1-766 LKAAHLLDGA GRSHTPSSLQ AAGLDIAMIK MVAPSMANRV IDHSILAFGA ENSTTRP00000009905/1-468 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_05733T0/1-504 ---------- ---------- -IFINNEWHD SVSKRTFPTI NPSTGDVICH ENSBTAP00000011521/1-520 ---------- ---------- -IFINNEWHD AVSKKTFPTV NPSTGDVICH BACU003456/1-766 AGLSNNYPLA QFFTWARALH FIFINNEWHD SVSKRTFPTI NPSTGDVICH ENSTTRP00000009905/1-468 ---------- ---------- -IFINNEWHD SVSKKTFPTI NPSTGDVICH 301 350 bmy_05733T0/1-504 VAEGDKEDVD RAVKAARAAF QLGSPWRRMD ASKRGWLLNR LADLIERDRT ENSBTAP00000011521/1-520 VAEGDKADVD RAVKAARAAF QLGSPWRRMD ASERGRLLNR LADLIERDRT BACU003456/1-766 VAEGDKEDVD RAVKAARAAF QLGSPWRCMD ASRRGWLLNR LADLIERDRT ENSTTRP00000009905/1-468 VAEGDKXXXX XXXXXXXXXX XXXXXXXXMD ASKR-LLLNR LADLIERDRT 351 400 bmy_05733T0/1-504 YLAALETLDN GKPYVISYLV DLDMVLRCLR YYAGWADKYH GKTIPIDGDY ENSBTAP00000011521/1-520 YLAALETLDN GKPYIISYLV DLDMVLKCLR YYAGWADKYH GKTIPIDGDY BACU003456/1-766 YLAALETLDN GKPYVISYLV DLDMVLRCLR YYAGWADKYH GKTIPIDGDY ENSTTRP00000009905/1-468 YLAALETLDN GKPYVISYLV DLDMVLKCLR YYAGWADKYH GKTIPIDGDY 401 450 bmy_05733T0/1-504 FSYTRHEPVG VCGQIIPWNF PLLMQAWKLG PALATGNVVV MKVAEQTPLT ENSBTAP00000011521/1-520 FSYTRHEPVG VCGQIIPWNF PLLMQAWKLG PALATGNVVV MKVAEQTPLT BACU003456/1-766 FSYTRHEPVG VCGQIIPWNF PLLMQAWKLG PALATGNVVV MKVAEQTPLT ENSTTRP00000009905/1-468 FSYTRHEPVG VCGQIIPWNF PLLMQAWKLG PALATGNVVV MKVAEQTPLT 451 500 bmy_05733T0/1-504 ALYVANLIKE AGFPPGVVNI IPGFGPTAGA AIASHEDVDK VAFTGSTEVG ENSBTAP00000011521/1-520 ALYVANLIKE AGFPPGVVNV IPGFGPTAGA AIASHEDVDK VAFTGSTEVG BACU003456/1-766 ALYVANLIKE AGFPPGVVNI IPGFGPTAGA AIASHEDVDK VAFTGSTEVG ENSTTRP00000009905/1-468 ALYVANLIKE AGFPPGVVNI VPGFGPTAGA AVASHEDVDK VAFTGSTEVG 501 550 bmy_05733T0/1-504 HLIQTAAGNS NLKRVTLELG GKSPNIIMSD ADMDWAVEQA HFALFFNQGQ ENSBTAP00000011521/1-520 HLIQVAAGKS NLKRVTLELG GKSPNIIMSD ADMDWAVEQA HFALFFNQGQ BACU003456/1-766 HLIQTAAGNS NLKRVTLELG GKSPNIIMSD ADMDWAVEQA HFALFFNQGQ ENSTTRP00000009905/1-468 HLIQTAAGNS NLKRVTLELG GKSPNIIMSD ADMDWAVEQA HFALFFNQGQ 551 600 bmy_05733T0/1-504 CCCAGSRTFV QEDIYSKFVE RSVARARSR- ---------- ----VDETQF ENSBTAP00000011521/1-520 CCCAGSRTFV QEDIYAEFVE RSVARAKSRV VGNPFDSRTE QGPQVDETQF BACU003456/1-766 CCCAGSRTFV QEDIYAKFVE RSVARARSRV VGNPFDSQTE QGPQVDETQF ENSTTRP00000009905/1-468 CCCAGSRTFV QEDVYTEFVE RSVARARSRV VGNPFDSRTE QGPQVDETQF 601 650 bmy_05733T0/1-504 KKVLGYIKSG KEEGAKLLCG GGAAADRGYF IQPTVFGDVQ DGMTIAKEEI ENSBTAP00000011521/1-520 KKVLGYIKSG KEEGAKLLCG GGAAADRGYF IQPTVFGDVQ DGMTIAKEEI BACU003456/1-766 KKVLGYIKSG KEEGAKLLCG GGAAADRGYF IQPTVFGDVQ DGMTIAKEEI ENSTTRP00000009905/1-468 KKVLGYIKSG KEEGAKLLCG GGAAADRGYF IQPTVFGDVQ DGMTIAKEEI 651 700 bmy_05733T0/1-504 FGPVMQILKF KTIEEVVRRA NNSKYGLAAA VFTKDLDKAX YLSQALQAGT ENSBTAP00000011521/1-520 FGPVMQILKF KSMEEVVGRA NNSKYGLAAA VFTKDLDKAN YLSQALQAGT BACU003456/1-766 FGPVMQILKF KTIEEVVRRA NNSKYGLAAA VFTKDLDKAN YLSQALQAGT ENSTTRP00000009905/1-468 FGPVMQILKF KTIEEVVGRA NNSKYGLAAA VFTKDLDKAN YLSQALQAGT 701 750 bmy_05733T0/1-504 VWVNCYDVFG AQSPFGGYKL SGSGRELGEY GLQAYTEVKT VTVKVPQKNS ENSBTAP00000011521/1-520 VWVNCYDVFG AQSPFGGYKL SGSGRELGEY GLQAYTEVKT VTVRVPQKNS BACU003456/1-766 VWVNCYDVFG AQSPFGGYKL SGSGRELGEY GLQAYTEVKT IGFHCLNIHA ENSTTRP00000009905/1-468 VWVNCYDVFG AQSPFGGYKL SGSGRELGEY GLQAYTEVKT ---------- 751 800 bmy_05733T0/1-504 ---------- ------ ENSBTAP00000011521/1-520 ---------- ------ BACU003456/1-766 ADDYCLSLDN TTQRLA ENSTTRP00000009905/1-468 ---------- ------