KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:56 2014 Check: 00 .. Name: ENSP00000378356/1-890 Len: 890 Check: 4810 Weight: 1.00 Name: ENSBTAP00000011539/1-888 Len: 890 Check: 3052 Weight: 1.00 Name: ENSTTRP00000005088/1-890 Len: 890 Check: 5815 Weight: 1.00 Name: bmy_12152T0/1-889 Len: 890 Check: 4650 Weight: 1.00 Name: BACU004101/1-890 Len: 890 Check: 5376 Weight: 1.00 // 1 50 ENSP00000378356/1-890 MSQGILSPPA GLLSDDDVVV SPMFESTAAD LGSVVRKNLL SDCSVVSTSL ENSBTAP00000011539/1-888 MSQGILSPPA GLLSDEEVVV SPMFESTAAD LGSVIRKDLL SDCSVISTSL ENSTTRP00000005088/1-890 MSQGILSPPA GLLSDEEVVV SPMFESTAAD LGSVVRKDLL SDCSVISTSL bmy_12152T0/1-889 MSQGILSPPT GLLSDEEVVV SPMFESTAAD LGSVVRKDLL SDCSVISTSL BACU004101/1-890 MSQGILSPPT GLLSDEEVVV SPMFESTAAD LGSVVRKDLL SDCSVISTSL 51 100 ENSP00000378356/1-890 EDKQQVPSED SMEKVKVYLR VRPLLPSELE RQEDQGCVRI ENVETLVLQA ENSBTAP00000011539/1-888 EDK-QVPSED GTEKVKVYLR VRPLLPSELE RQEDQGCVCI ENMETLALQA ENSTTRP00000005088/1-890 EDKQQVPSED STEKVKVYLR VRPLLSSELE RQEDQGCVRI ENIETLALQA bmy_12152T0/1-889 EDKQQVPSED STEKVKVYLR VRPLLSSELE RQEDQGCVRI ENIETLALQA BACU004101/1-890 EDKQQVPSED STEKVKVYLR VRPLLSSELE RQEDQGCVRI ENIETLALQA 101 150 ENSP00000378356/1-890 PKDSFALKSN ERGIGQATHR FTFSQIFGPE VGQASFFNLT VKEMVKDVLK ENSBTAP00000011539/1-888 PKDSFAQKSN ERGIGQATHR FTFSQIFGPE VGQASFFNLT VKEMVKDVLK ENSTTRP00000005088/1-890 PKDSFAQKSN ERGIGQATHR FTFSQIFGPE VGQECFFNLT VKEMVKDVLK bmy_12152T0/1-889 PKDSFAQKSN ERGIGQATHR FTFSQIFGPE VGQESFFNLT VKEMVKDVLK BACU004101/1-890 PKDSFAQKSN ERGIGQATHR FTFSQIFGPE VGQESFFNLT VKEMVKDVLK 151 200 ENSP00000378356/1-890 GQNWLIYTYG VTNSGKTHTI QGTIKDGGIL PRSLALIFNS LQGQLHPTPD ENSBTAP00000011539/1-888 GQNWLIYTYG VTNSGKTYTI QGTIKDGGIL PRSLALIFNS LQGQLHPTPN ENSTTRP00000005088/1-890 GQNWLIYTYG VTNSGKTHTI QGTIKDGGIL PRSLALIFNS LQGQLHPTPD bmy_12152T0/1-889 GQNWLIYTYG VTNSGKTHTI QGTIKDGGIL PRSLALIFSS LQGQLYPTPD BACU004101/1-890 GQNWLIYTYG VTNSGKTHTI QGTIKDGGIL PRSLALIFNS LQGQLYPTPD 201 250 ENSP00000378356/1-890 LKPLLSNEVI WLDSKQIRQE EMKKLSLLNG GLQEEELSTS LKRSVYIESR ENSBTAP00000011539/1-888 LKPLFSNEVM WLDSKQIRQE ELKKLALLNG GLQEEELSTS LKKSVYIDSR ENSTTRP00000005088/1-890 LKPVLSNEVM WLDSKQIRQE ELKKLALLNG GLQEEELSTS LKKNVYIESR bmy_12152T0/1-889 LKPVLSNEVM WLDSKQIRQE ELKKLALLNG GLQEEELSTS LKKNVYIESR BACU004101/1-890 LKPVLSNEVM WLDSKQIRQE ELKKLALLNG GLQEEELSTS LKKNVYIESR 251 300 ENSP00000378356/1-890 IGTSTSFDSG IAGLSSISQC TSSSQLDETS HRWAQPDTAP LPVPANIRFS ENSBTAP00000011539/1-888 MGTSTSFDSG IAGLSSSSQF PSSSQLDEMS HRWAQPDTVP VSVPADLRFS ENSTTRP00000005088/1-890 MGTSSSFDSG IAGLSSTSQF TSSSQLDETS HQWAQPDTAP VSVPADVRFS bmy_12152T0/1-889 MGTSASFDSG IAGLSSTSQF TSSSQLDEMS HQWAQPDTAP VSVPADIRFS BACU004101/1-890 MGTSTSFDSG IAGLSSTSQF TSSSQLDEMS HQWAQPDTAP VSVPADIRFS 301 350 ENSP00000378356/1-890 IWISFFEIYN ELLYDLLEPP SQQRKRQTLR LCEDQNGNPY VKDLNWIHVQ ENSBTAP00000011539/1-888 IWISFFEIYN ELLYDLLEPP SQQRKRQTLR LCEDQNGNPY VKDLNWIHVQ ENSTTRP00000005088/1-890 IWISFFEIYN ELLYDLLEPH SQQRKRQTLR LCEDQNGNPY VKDLNWIHVQ bmy_12152T0/1-889 IWISFFEIYN ELLYDLLEPH SQQRKRQTLR LCEDQNGNPY VKDLNWIHVQ BACU004101/1-890 IWISFFEIYN ELLYDLLEPH SQQRKRQTLR LCEDQNGNPY VKDLNWIHVQ 351 400 ENSP00000378356/1-890 DAEEAWKLLK VGRKNQSFAS THLNQNSSRS HSIFSIRILH LQGEGDIVPK ENSBTAP00000011539/1-888 DAEEAWKLLK VGRKNQSFAS THLNQNSSRS HSIFSIRILH LQGEGDIIPK ENSTTRP00000005088/1-890 DAEEAWKLLK VGRKNQSFAS THLNQNSSRS HSIFSVRILH LQGEGDIIPK bmy_12152T0/1-889 DAEEAWKLLK VGRKNQSFAS THLNQNSSRS HSIFSVRILH LQGEGDIIPK BACU004101/1-890 DAEEAWKLLK VGRKNQSFAS THLNQNSSRS HSIFSVRILH LQGEGDIIPK 401 450 ENSP00000378356/1-890 ISELSLCDLA GSERCKDQKS GERLKEAGNI NTSLHTLGRC IAALRQNQQN ENSBTAP00000011539/1-888 ISELSLCDLA GSERCKDQKS GERLKEAGNI NTSLHTLGRC IAALRQNQQN ENSTTRP00000005088/1-890 ISELSLCDLA GSERCKDQKS GERLKEAGNI NTSLHTLGRC ITALRQNQQN bmy_12152T0/1-889 ISELSLCDLA GSERCKDQKS GERLKEAGNI NTSLHTLGRC ITALRQNQQN BACU004101/1-890 ISELSLCDLA GSERCKDQKS GERLKEAGNI NTSLHTLGRC ITALRQNQQN 451 500 ENSP00000378356/1-890 RSKQNLVPFR DSKLTRVFQG FFTGRGRSCM IVNVNPCAST YDETLHVAKF ENSBTAP00000011539/1-888 RSKQNLVPFR DSKLTRVFQG FFTGRGRSCM IVNVNPCAST YDETLHVAKF ENSTTRP00000005088/1-890 RSKQNLVPFR DSKLTRVFQG FFTGRGRSCM IVNVNPCAST YDETLHVAKF bmy_12152T0/1-889 RSKQNLVPFR DSKLTRVFQG FFTGRGRSCM IVNVNPCAST YDETLHVAKF BACU004101/1-890 RSKQNLVPFR DSKLTRVFQG FFTGRGRSCM IVNVNPCAST YDETLHVAKF 501 550 ENSP00000378356/1-890 SAIASQLVHA PPMQLGFPSL HSFIKEHSLQ VSPSLEKGAK ADTGLDDDIE ENSBTAP00000011539/1-888 SAIASQLVHA PPVQLGFPSI HSFLKEHSLR ASPSLETGAK TDPGLGDDIE ENSTTRP00000005088/1-890 SAITSQLVHA PPVQLGFPSL HSFIKEHSLR ASPSLETGAK TDPCLDDDIE bmy_12152T0/1-889 SAITSQLVHA PPVQLGFPSL HSFIKEHSLR ASPSLETGAK TDPGL-DDIE BACU004101/1-890 SAITSQLVHA PPVQLGFPSL HSFIKEHSLR ASPSLETGAK TDPGLDDDIE 551 600 ENSP00000378356/1-890 NEADISMYGK EELLQVVEAM KTLLLKERQE KLQLEMHLRD EICNEMVEQM ENSBTAP00000011539/1-888 NEVDISTYGK EELLQVVEAM KALLLKERQE KLRLEVQLRD EICNEMVEQM ENSTTRP00000005088/1-890 NEVDISTYGK EELLQVVGAM KALLLKERQE KLRLEMQLRD EICNEMVEQM bmy_12152T0/1-889 NEVDISTYGK EELLQVVGAM KALLLKERQE KLRLEMQLRD EICNEMVEQM BACU004101/1-890 NEVDISTYGK EELLQVVGAM KALLLKERQE KLRLEMQLRD EICNEMVEQM 601 650 ENSP00000378356/1-890 QQREQWCSEH LDTQKELLEE MYEEKLNILK ESLTSFYQEE IQERDEKIEE ENSBTAP00000011539/1-888 QQREQWCSEH LDTQKELLEE LYEDKLTILK ESLTSFYQEE LQERDEKIKE ENSTTRP00000005088/1-890 QQREQWCSEH LDTQKELLEE MYEEKLTILK ESLTSFYQEE LQERDEKIEE bmy_12152T0/1-889 QQREQWCSEH LDTQKELLEE MYEEKLTILK ESLTSFYQEE LQERDEKIEE BACU004101/1-890 QQREQWCSEH LDTQKELLEE MYEEKLTILK ESLTSFYQEE LQERDEKIEE 651 700 ENSP00000378356/1-890 LEALLQEARQ QSVAHQQSGS ELALRRSQRL AASASTQQLQ EVKAKLQQCK ENSBTAP00000011539/1-888 LEALLQEARQ QQVAHQPSGS ELSLRRSQRL -TSVSTQQFH EIKAKLEQCK ENSTTRP00000005088/1-890 LEALLKEARQ QPVAHQQSVS ELSLRRSQRL AASASTQQLQ EIKAKLQQCK bmy_12152T0/1-889 LEALLKEARQ QPVAYQQSGS ELSLRRSQRL AASASTQQLQ EIKAKLEQCK BACU004101/1-890 LEALLKEARQ QPVAHQQSGS ELSLRRSQRL AASASTQQLQ EIKAKLEQCK 701 750 ENSP00000378356/1-890 AELNSTTEEL HKYQKMLEPP PSAKPFTIDV DKKLEEGQKN IRLLRTELQK ENSBTAP00000011539/1-888 AELNSTTEEL QKYQKMLEPP PSAKPFIVDV DKKLEEGQKN IRLLRTELQK ENSTTRP00000005088/1-890 AELNSTTEEL QKYQKMLEPP PSAKPFIVDV DKKLEEGQKN IRLLRTELQK bmy_12152T0/1-889 AELNSTTEEL QKYQKMLEPP PSAKPFIVDV DKKLEEGQKN IRLLRTELQK BACU004101/1-890 AELNSTTEEL QKYQKMLEPP PSAKPFIVDV DKKLEEGQKN IRLLRTELQK 751 800 ENSP00000378356/1-890 LGESLQSAER ACCHSTGAGK LRQALTTCDD ILIKQDQTLA ELQNNMVLVK ENSBTAP00000011539/1-888 LGESLQSAER ACCHNTGAGK LRQALATCDD ILIKQDQTLA ELQNNMTLVK ENSTTRP00000005088/1-890 LGESLQSAER ACCHSTGAGK LRQALATCDD ILIKQDQTLA ELQNNMMLVK bmy_12152T0/1-889 LGESLQSAER ACCHSTGAGK LRQALATCDD ILIKQDQTLA ELQNNMMLVK BACU004101/1-890 LGESLQSAER ACCHSTGAGK LRQALATCDD ILIKQDQTLA ELQNNMMLVK 801 850 ENSP00000378356/1-890 LDLRKKAACI AEQYHTVLKL QGQVSAKKRL GTNQENQQPN QQPPGKKPFL ENSBTAP00000011539/1-888 LDLRKKAACI AEQYHTVLKL QGQASTKKRL GANQENQQPN QQPPGKKPFL ENSTTRP00000005088/1-890 LDLRKKAACI AEQYHTVLKL QGQASTKKRL GANQENQQPN QQPPGKKPFL bmy_12152T0/1-889 LDLRKKAACI AEQYHTVLKL QGQASTKKRL GANQENQQPN QQPPGKKPFL BACU004101/1-890 LDLRKKAACI AEQYHTVLKL QGQASTKKRL GANQENQQPN QQPPGKKPFL 851 900 ENSP00000378356/1-890 RNLLPRTPTC QSSTDCSPYA RILRSRRSPL LKSGPFGKKY ENSBTAP00000011539/1-888 RNLLPRTPTC QSSTDCSPYA RILRSRRSPL LKSGPFGKKY ENSTTRP00000005088/1-890 RNLLPRTPTC QSSTDYSPYA RILRSRCSPL LKSGPFGKKY bmy_12152T0/1-889 RNLLPRTPTC QSSTDCSPYA RILRSRCSPL LKSGPFGKKY BACU004101/1-890 RNLLPRTPTC QSSTDCSPYA RILRSRCSPL LKSGPFGKKY