KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:58 2014 Check: 00 .. Name: BACU010562/1-381 Len: 418 Check: 8791 Weight: 1.00 Name: ENSP00000374152/1-418 Len: 418 Check: 4146 Weight: 1.00 Name: ENSBTAP00000011544/1-418 Len: 418 Check: 1865 Weight: 1.00 Name: ENSTTRP00000000773/1-417 Len: 418 Check: 1055 Weight: 1.00 Name: bmy_16179T0/1-364 Len: 418 Check: 6912 Weight: 1.00 // 1 50 BACU010562/1-381 ----MVDV-- ------NRDA VLMHIRQ--- --GKGLFATQ LIQKGETIFI ENSP00000374152/1-418 MAASMCDVFS FCVGVAGRAR VSVEVRFVSS AKGKGLFATQ LIRKGETIFV ENSBTAP00000011544/1-418 MAASMCDVFS FCVGVAGPAR IAVEVRFVSS AKGKGLFATQ LIRKGETIFV ENSTTRP00000000773/1-417 MAASMCDVFS FCVGVAGRAR VAVEVRFVSS AKGKGLFATQ PIQKGETIFI bmy_16179T0/1-364 MAASMCDVFS FCVGVAGRAR VAVEVRFVSS AKGKGLFATQ LIQKGETIFI 51 100 BACU010562/1-381 ERPLVAAQFL WNALYRYRAC DHCLRALEKA EENAQRLTGK PGQVLPHPEL ENSP00000374152/1-418 ERPLVAAQFL WNALYRYRAC DHCLRALEKA EENAQRLTGK PGQVLPHPEL ENSBTAP00000011544/1-418 ERPLVAAQFL WNALYRYRAC DHCLRALEKA EENAQRLTGK PGQVLPHPEL ENSTTRP00000000773/1-417 ERPLVAAQFL WNALYRYRAC DHCLRALEKA EENAQRLTGK PGQVLPHPEL bmy_16179T0/1-364 ERPLVAAQFL WNALYRYR-- ---------- ---------- ---------- 101 150 BACU010562/1-381 CTVRKDLHQN CPHCQVTYCS TECLLAAAEQ YHQVLCPGPS QDDPLHPLNK ENSP00000374152/1-418 CTVRKDLHQN CPHCQVMYCS AECRLAATEQ YHQVLCPGPS QDDPLHPLNK ENSBTAP00000011544/1-418 CTVRQDLHQS CPHCRVTYCS AECRLAAAEQ YHQILCPGPS QDDPAHPLNK ENSTTRP00000000773/1-417 CTVRKDLHQN CPHCQVTYCS TECLLAAAEQ YHRVLCPGPS QDDPLHPLNK bmy_16179T0/1-364 ---------- ---------- -ECLLAAAEQ YHQVLCPGPS QDDPLHPLNK 151 200 BACU010562/1-381 LQEAWRSVHY PPETASIMLM ARMVATVKQA KDKDRWIRLF SQFCNKTANE ENSP00000374152/1-418 LQEAWRSIHY PPETASIMLM ARMVATVKQA KDKDRWIRLF SQFCNKTANE ENSBTAP00000011544/1-418 LQEAWRSVHY PPETASIMLM ARMVATVKQA KDKDRWIRLF SQFCNKTANE ENSTTRP00000000773/1-417 LQEAWRSVHY PPETASIMLM ARMVATVKQA KDKDRWIRLF SQFCNKTANE bmy_16179T0/1-364 LQEAWRSVHY PPETASIMLM ARMVATVKQA KDKDRWIRLF SQFCNKTANE 201 250 BACU010562/1-381 EEEIVHKLLG DKFKGQLELL RRLFTEALYE EALSQWFTLD GFRSLFALVG ENSP00000374152/1-418 EEEIVHKLLG DKFKGQLELL RRLFTEALYE EAVSQWFTPD GFRSLFALVG ENSBTAP00000011544/1-418 EEEIVHKLLG DKFKGQLELL RRLFTEALYE EALSQWFTPD GFRSLFALVG ENSTTRP00000000773/1-417 EEEIVHKLLG DKFKGQLELL RRLFTEALYE EALSQWFTPD GFRSLFALVG bmy_16179T0/1-364 EEEIVHKLLG DKFKGQLELL RRLFTEALYE EALSQWFTPD GFRSLFALVG 251 300 BACU010562/1-381 TNGQGIGTSS LSQWVHACDA LELKPQDREQ LDAFIDQLYK DIEAG----- ENSP00000374152/1-418 TNGQGIGTSS LSQWVHACDT LELKPQDREQ LDAFIDQLYK DIEAATGEFL ENSBTAP00000011544/1-418 TNGQGIGTSS LSQWVHACDA LELKPEDREQ LDAFIDQLYK DIEAATGEFL ENSTTRP00000000773/1-417 TNGQGIGTSS LSQWVHACDA LELKPQDREQ LDAFIDQLYK DIETATGEFL bmy_16179T0/1-364 TNGQGIGTSS LSQWVHACDA LELKPQDREQ LDTFIDQLYK DIEAATGEFL 301 350 BACU010562/1-381 ---------- ----NHSCVP NAETSFPENN FLLHVTALED IKPGEEICIS ENSP00000374152/1-418 NCEGSGLFVL QSCCNHSCVP NAETSFPENN FLLHVTALED IKPGEEICIS ENSBTAP00000011544/1-418 NCEGSGLFVL QSCCNHSCVP NAETSFPENN FLLHVTALED IKPGEEICIS ENSTTRP00000000773/1-417 NCEGSGLFVL QSCCNHSCVP NAETSFPENN FLLHVTALED IKPGEEICIS bmy_16179T0/1-364 NCEGSGLFVL QSCCNHSCVP NAETSFPENN FLLHVTALED IKPGEEICIS 351 400 BACU010562/1-381 YLDCCQRERS RHSRHKILRE NYLFVCSCPK CLAEADEPNM TS-EEEDEEE ENSP00000374152/1-418 YLDCCQRERS RHSRHKILRE NYLFVCSCPK CLAEADEPNV TSEEEEEEEE ENSBTAP00000011544/1-418 YLDCCQRERS RHSRHKILRE NYLFVCSCPK CLAEADEPNM TSEEEEEEEE ENSTTRP00000000773/1-417 YLDCCQRERS RHSRHKILRE NYLFVCSCPK CLAEADEPNM TS-EEEDDEE bmy_16179T0/1-364 YLDCCQRERS RHSRHKILRE NYLFVCSCPK CLAEADEPNM TS-EEEDEEE 401 450 BACU010562/1-381 DEEGEPEDAE LGDEMTDV ENSP00000374152/1-418 EEEGEPEDAE LGDEMTDV ENSBTAP00000011544/1-418 EEEGEPEDAE LGDEMTDV ENSTTRP00000000773/1-417 DEEGEPEDAE LGDEMTDV bmy_16179T0/1-364 DEEGEPEDAE LGDEMTDV