KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:59 2014 Check: 00 .. Name: ENSTTRP00000005649/1-1196 Len: 1197 Check: 332 Weight: 1.00 Name: ENSBTAP00000011562/1-1191 Len: 1197 Check: 8123 Weight: 1.00 Name: BACU007373/1-927 Len: 1197 Check: 3801 Weight: 1.00 Name: bmy_12607T0/1-962 Len: 1197 Check: 1408 Weight: 1.00 Name: ENSP00000286398/1-1197 Len: 1197 Check: 4319 Weight: 1.00 // 1 50 ENSTTRP00000005649/1-1196 MHIKSIILEG FKSYAQRTEV NGFDPLFNAI TGLNGSGKSN ILDSICFLLG ENSBTAP00000011562/1-1191 MHIKSVILEG FKSYAQRTEV NGFDPLFNAI TGLNGSGKSN ILDSICFLLG BACU007373/1-927 MHIKSIILEG FKSYAQRTEV NGFDPLFNAI TGLNGSGKSN ILDSICFLLG bmy_12607T0/1-962 MHIKSIILXG FKSYAQRTEV NGFDPLFNAI TGLNGSGKSN ILDSICFLLG ENSP00000286398/1-1197 MHIKSIILEG FKSYAQRTEV NGFDPLFNAI TGLNGSGKSN ILDSICFLLG 51 100 ENSTTRP00000005649/1-1196 ISNLSQVRAS NLQDLVYKNG QAGITKASVS ITFDNSDKKQ SPLGFEIHDE ENSBTAP00000011562/1-1191 ISNLSQVRAS NLQDLVYKNG QAGITKALVS ITFDNSDKKQ SPLGFEVHDE BACU007373/1-927 ISNLSQVRAS NLQDLVYKNG QAGITKASVS ITFDNSDKKQ SPLGFEVHDE bmy_12607T0/1-962 ISNLSQVRAS NLQDLVYKNG QAGITKASVS ITFDNSDKKQ SPLGFEVHDE ENSP00000286398/1-1197 ISNLSQVRAS NLQDLVYKNG QAGITKASVS ITFDNSDKKQ SPLGFEVHDE 101 150 ENSTTRP00000005649/1-1196 ITVTRQVVIG GRNKYLINGV NANNTRVQDL FCSVGLNVNN PHFLIMQXXX ENSBTAP00000011562/1-1191 ITVTRQVVIG GRNKYLINGV NANNTRVYDL FCSVGLNVNN PHFLIMQGRI BACU007373/1-927 ITVTRQVVIG GRNKYLINGV NANNTRVQDL FCSVGLNVNN PHFLIMQGRI bmy_12607T0/1-962 ITVTRQVVIG GRNKYLINGV NANNTRVQDL FCSVGLNVNN PHFLIMQGRI ENSP00000286398/1-1197 ITVTRQVVIG GRNKYLINGV NANNTRVQDL FCSVGLNVNN PHFLIMQGRI 151 200 ENSTTRP00000005649/1-1196 XXXXXXXXXX ILSMIEEAAG TRMYEYKKIA AQKTIEKKEA KLKEIKMILE ENSBTAP00000011562/1-1191 TKVMNMKPPE ILSMIEEAAG TRMYEYKKQN AQRTIEKKEA KLREIKTILE BACU007373/1-927 TKVLNMKPPE ILSMIEEAAG TRMYEYKKIA AQKTIEKKEA KLKEIKTILE bmy_12607T0/1-962 TKVLNMKPPE ILSMIEEAAG TRMYEYKKIA AQKTIEKKEA KLKEIKTILE ENSP00000286398/1-1197 TKVLNMKPPE ILSMIEEAAG TRMYEYKKIA AQKTIEKKEA KLKEIKTILE 201 250 ENSTTRP00000005649/1-1196 EEITPTIQKL KEERSSYLEY QKLMREIEHL SRLYIAYQFL LAEDTKERSA ENSBTAP00000011562/1-1191 EEITPTIQKL KEERSSYLEY QKLLREIEHL SRLYIAYQFL LAEDTKERSA BACU007373/1-927 EEITPTIQKL KEERSSYLEY QKLMREIEHL SRLYIAYQFL LAEDTKERSA bmy_12607T0/1-962 EEITPTIQKL KEERSSYLEY QKLMREIEHL SRLYIAYQFL LAEDTKERSA ENSP00000286398/1-1197 EEITPTIQKL KEERSSYLEY QKVMREIEHL SRLYIAYQFL LAEDTKVRSA 251 300 ENSTTRP00000005649/1-1196 EEFKEMHDKI VKLQEDLS-N DKKXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000011562/1-1191 EALKEMQDKI KKLQEEVYEN DKKIKALSHE IEELEKRKDK EVGGILRSLE BACU007373/1-927 EELKEMQDKI VKLQEELSEN DKKIKALSHE IEELEKRKDK EIGGILRSLE bmy_12607T0/1-962 EELKEMQDKI VKLQEELSEN DKKIKALSHE IEELEKRKDK ---------- ENSP00000286398/1-1197 EELKEMQDKV IKLQEELSEN DKKIKALNHE IEELEKRKDK ETGGILRSLE 301 350 ENSTTRP00000005649/1-1196 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX DSKTLAAKEK ENSBTAP00000011562/1-1191 DALTEAQRVN TKSQSAFDFK KKNLASEENK RKELEKNMVE DSKTLAAKEK BACU007373/1-927 DALAEAQRVN TKSQSAFDFK KKNLASEENK RKELEKNMVE DSKTLATKEK bmy_12607T0/1-962 ---------- ---------- ---------- ---------- DSKTLAAKEK ENSP00000286398/1-1197 DALAEAQRVN TKSQSAFDLK KKNLACEESK RKELEKNMVE DSKTLAAKEK 351 400 ENSTTRP00000005649/1-1196 EVKKMTDGLS ALQEASNKDA EALAAAQQHF NAVSAGLSSN EDGAEATLAG ENSBTAP00000011562/1-1191 EVKKITDGLS ALQEASNKDA EALAVAQQHF NAVSAGLSSN EDGAEATLAG BACU007373/1-927 EVKKITDGLS ALQEASNKDA EALAAAQQHF NAVSAGLSSN EDGAEATLAG bmy_12607T0/1-962 EVKKITDGLS ALQEASNKDA EALAAAQQHF NAVSAGLSSN EDGAEATLAG ENSP00000286398/1-1197 EVKKITDGLH ALQEASNKDA EALAAAQQHF NAVSAGLSSN EDGAEATLAG 401 450 ENSTTRP00000005649/1-1196 QMMACKNDIS KVQTEAKQAQ MKLKHAQQEL KTKQTEIKKM DGGYRKDQEA ENSBTAP00000011562/1-1191 QMMACKNEIS KTQTEAKQAQ MKLKHAQQEL KTKQTEIKKM DSGYRKDQEA BACU007373/1-927 QMMACKNDIS KAQTEAKQAQ MKLKHAQQEL KTKQTEIKKM DGGYRKDQEA bmy_12607T0/1-962 QMMACKNDIS KVQTEAKQAQ MKLKHAQQEL KTKQTEIKKM DGGYRKDQEA ENSP00000286398/1-1197 QMMACKNDIS KAQTEAKQAQ MKLKHAQQEL KNKQAEVKKM DSGYRKDQEA 451 500 ENSTTRP00000005649/1-1196 LEAVKKLREK LEAEMKKLNY EENKEECLLE RHRQLSRDIS RLKETYEALL ENSBTAP00000011562/1-1191 LEAVKKLKEK LETEMKRLNY EENKEESLLE RRRQLSRDIS RLKETEEALL BACU007373/1-927 LEAVKKLREK LEAEMKKLNY EENKEECLLE RRRQLSRDIS RLKETYEALL bmy_12607T0/1-962 LEAV------ ---------- ---------- ---------- ---------- ENSP00000286398/1-1197 LEAVKRLKEK LEAEMKKLNY EENKEESLLE KRRQLSRDIG RLKETYEALL 501 550 ENSTTRP00000005649/1-1196 ARFPNLRFAY RDPEKNWNRN CVKGLVASLF SVKDTSATTA LELVAGDRLY ENSBTAP00000011562/1-1191 ARFPNLRFAY RDPEKNWNRN CVKGLVASLI SVKDSSATTA LELVAGDRLY BACU007373/1-927 ARFPNLRFAY RDPEKNWNRN CVKGLVASLI SVKDTSATTA LELVAGDRLY bmy_12607T0/1-962 ---------- ---------- ---------- ---------- ---------- ENSP00000286398/1-1197 ARFPNLRFAY KDPEKNWNRN CVKGLVASLI SVKDTSATTA LELVAGERLY 551 600 ENSTTRP00000005649/1-1196 NVVVDTEVTG KKLLEKGELK RRYTIIPLNK ISARRIAPET LRVAQNLVGP ENSBTAP00000011562/1-1191 NVVVDTEVTG KKLLEKGELK RRYTIIPLNK ISSRCIAPET LRIAQNLVGP BACU007373/1-927 NVVVDTEVTG KKLLEKGELK RRYTIIPLNK ISARCIAPET LRVAQNL--- bmy_12607T0/1-962 ---------- ---------- ---------- ---------- --------GP ENSP00000286398/1-1197 NVVVDTEVTG KKLLERGELK RRYTIIPLNK ISARCIAPET LRVAQNLVGP 601 650 ENSTTRP00000005649/1-1196 NNVHVALSLV EYKPELQKAM EFVFGTTFVC DNMDNAKKVA FDKRIMTRTV ENSBTAP00000011562/1-1191 NNVHVALSLV EYKPELQKAM EFVFGMTFVC DNMDNAKKVA FDKRIMTRTV BACU007373/1-927 ---------- -------KAM EFVFGTTFIC DNMDNAKKVA FDKRIMTRTV bmy_12607T0/1-962 DNVHVALSLV EYKPELQKAM EFVFGTTFVC DXMDNAKKVA FDKRIMTRTV ENSP00000286398/1-1197 DNVHVALSLV EYKPELQKAM EFVFGTTFVC DNMDNAKKVA FDKRIMTRTV 651 700 ENSTTRP00000005649/1-1196 TLGGDVFDPH GTLSGXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000011562/1-1191 TLGGDVFDPH GTLSGGARSQ AASILMKFQE LKDVQDELRT KENELRALEE BACU007373/1-927 TLGGDVFDPH GTLSGGARSQ AASILTKFQE LKDVQDELRI KESELQALEE bmy_12607T0/1-962 TLGGDVFDPH GTLSGGARSQ AASILTKFQE LKDVQDELRI KENELQALEE ENSP00000286398/1-1197 TLGGDVFDPH GTLSGGARSQ AASILTKFQE LKDVQDELRI KENELRALEE 701 750 ENSTTRP00000005649/1-1196 XXXXXXXXXX XYRQLKQQWE MKTEEADLLQ TKLQQSSYHK QQEELDALKK ENSBTAP00000011562/1-1191 ELANLKNTAE KYRHLKQQWE MKAEEVDLLQ TKLQQSSYHK QQEELDALKK BACU007373/1-927 ELSGLKNTAE KYRQLKQQWE MKTEEADLLQ TKLQQSSYHK QQEELDALKK bmy_12607T0/1-962 ELAGLKNTAE KYRQLKQQWE MKTEEADLLQ TKLQQSSYHK QQEELDALKK ENSP00000286398/1-1197 ELAGLKNTAE KYRQLKQQWE MKTEEADLLQ TKLQQSSYHK QQEELDALKK 751 800 ENSTTRP00000005649/1-1196 IIEESEETLK NTKEIQKKAE EKYEVLENKM KNAEAERERE LKDAQKKLDC ENSBTAP00000011562/1-1191 IIEESEETLK NTKEIQKKAE EKYEVLENKM KNAEAERERE LKDAQKKLDC BACU007373/1-927 IIEESEETLK NTKEIQKKAE EKYEVLENKM KNAEAERERE LKDAQKKLDC bmy_12607T0/1-962 TIEESEETLK NTKEIQKKAE EKYEVLENKM KNAEAERERE LKDAQKKLDC ENSP00000286398/1-1197 TIEESEETLK NTKEIQRKAE EKYEVLENKM KNAEAERERE LKDAQKKLDC 801 850 ENSTTRP00000005649/1-1196 AKTKADASTK KMKEKQQEVE AITLELEELK REHASNEQQL EAVNEAIKSY ENSBTAP00000011562/1-1191 AKTKADASSK KMKEKQQEVE AITLELEELR REHASYEQQL EAVKEAIISY BACU007373/1-927 AKTKADASTK KMKEKQQEVE AITLELEELK REHASNEQQL EAVNEAIKSY bmy_12607T0/1-962 AKTKADASTK KMKEKQQEVE AITLELEELK REHASNEQQL EAVNEAIKSY ENSP00000286398/1-1197 AKTKADASSK KMKEKQQEVE AITLELEELK REHTSYKQQL EAVNEAIKSY 851 900 ENSTTRP00000005649/1-1196 EGQIAVMAAE VAKNKELVNK AQEEVTKQKE VITAQDSIVK AKYAEVAKHK ENSBTAP00000011562/1-1191 EGQIAVMASE VAKNEELVNK AQEEVSKQKE VITAQDNIIK AKYAEIAQHK BACU007373/1-927 EGQIAVMAAE VAKNKELVNK AQEEVTKQKE VITAQDSIVK AKYAEVAKHK bmy_12607T0/1-962 EGQIAVMAAE VAKNKELVNK AQEEVTKQKE VITAQDSIVK AKYAEVSK-- ENSP00000286398/1-1197 ESQIEVMAAE VAKNKESVNK AQEEVTKQKE VITAQDTVIK AKYAEVAKHK 901 950 ENSTTRP00000005649/1-1196 EQNNESQLKI KELDHNISKH KREAEDAAAK VSKMLKDYDW INAEKHLFGQ ENSBTAP00000011562/1-1191 EQNNESQLKI KELDHNISKH KREAEDAAAK VSKMLKDYDW ITVEKHLFGQ BACU007373/1-927 EQNNESQLKI KELDHNISKH KREAE----- ---------- ---------- bmy_12607T0/1-962 ---------- ---------- ---------- ---MLKDYDW INAEKHLFGQ ENSP00000286398/1-1197 EQNNDSQLKI KELDHNISKH KREAEDGAAK VSKMLKDYDW INAERHLFGQ 951 1000 ENSTTRP00000005649/1-1196 PNSTYDFKTN NPKEAGQRLQ KLQEMKEKLG RNVNMRAMNV LTEAEERYND ENSBTAP00000011562/1-1191 PNSTYDFKAN NPKEAGERLQ KLQEMKEKLG RNVNMRAMNV LTEAEERYND BACU007373/1-927 ---------- ---------- ---------- ---------- ---------D bmy_12607T0/1-962 PNSTYDFKTN NPKEAGQRLQ KLQEMKEKLG RNVNMRAMNV LTEAEERYND ENSP00000286398/1-1197 PNSAYDFKTN NPKEAGQRLQ KLQEMKEKLG RNVNMRAMNV LTEAEERYND 1001 1050 ENSTTRP00000005649/1-1196 LMKKKRIVEN DKSKILATIE DLDQKKNQAL NIAWQKVNKD FGSIFSTLLP ENSBTAP00000011562/1-1191 LMKKKRIVEN DKSKILATIE DLDQKKNQAI NIAWQKVNKD FGSIFSTLLP BACU007373/1-927 AAAKARLC-- ---------- ---------- ---------- -----CSFLP bmy_12607T0/1-962 LMKKKRIVEN DKSKILATIE DLDQKKNQAL NIAWQKVNKD FGSIFSTLLP ENSP00000286398/1-1197 LMKKKRIVEN DKSKILTTIE DLDQKKNQAL NIAWQKVNKD FGSIFSTLLP 1051 1100 ENSTTRP00000005649/1-1196 GANAMLAPPE GQNVLDGLEF KVALGNTWKE NLTELSGGQR SLVALSLILS ENSBTAP00000011562/1-1191 GANAMLAPPE GQTVLDGLEF KVALGNTWKE NLTELSGGQR SLVALSLILS BACU007373/1-927 ---------- ---------- ---------- ---------- ---------- bmy_12607T0/1-962 GANAMLAPPE GQNVLDGLEF KVALGNTWKE NLTELSGGQR SLVALSLILS ENSP00000286398/1-1197 GANAMLAPPE GQTVLDGLEF KVALGNTWKE NLTELSGGQR SLVALSLILS 1101 1150 ENSTTRP00000005649/1-1196 MLLFKPAPIY ILDEVDAALD LSHTQNIGQM LRTHFTHSQF IVVSLKEGMF ENSBTAP00000011562/1-1191 MLLFKPAPIY ILDEVDAALD LSHTQNIGHM LRTHFTHSQF IVVSLKEGMF BACU007373/1-927 LIKFLP---- ---------- ------LG-- ---------- ---------- bmy_12607T0/1-962 MLLFKPAPIY ILDEVDAALD LSHTQNIGQM LRTHFTHSQF IVVSLKEGMF ENSP00000286398/1-1197 MLLFKPAPIY ILDEVDAALD LSHTQNIGQM LRTHFTHSQF IVVSLKEGMF 1151 1200 ENSTTRP00000005649/1-1196 NNANVLFKTK FVDGVSTVAR FTQCQNGKVP KETKSKAKGP KSHTEVK ENSBTAP00000011562/1-1191 NNANVLFKTK FVDGVSTVAR FTQCQNGKVP KENESKSKRP K------ BACU007373/1-927 ---------- ---------- ---------- ---------- ------- bmy_12607T0/1-962 NNANVLFKTK FVDGVSTVAR FTQCQNGKVP KETKSKAKGP K------ ENSP00000286398/1-1197 NNANVLFKTK FVDGVSTVAR FTQCQNGKIS KEAKSKAKPP KGAHVEV