KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:44:02 2014 Check: 00 .. Name: ENSP00000369530/1-676 Len: 714 Check: 142 Weight: 1.00 Name: ENSBTAP00000011570/1-714 Len: 714 Check: 2011 Weight: 1.00 Name: bmy_01717T0/1-677 Len: 714 Check: 8456 Weight: 1.00 Name: ENSTTRP00000009784/1-675 Len: 714 Check: 7531 Weight: 1.00 // 1 50 ENSP00000369530/1-676 MAEFRVRVST GEAFGAGTWD KVSVSIVGTR GESPPLPLDN LGKEFTAGAE ENSBTAP00000011570/1-714 MAKFRVRVST GEAFGAGTWD KISVSIVGTR GETPPLPLDR LGKEFNAGAE bmy_01717T0/1-677 MAEFRVRVST GEAFGAGTWD KMSVIIVGTE GETLPLPLDH FGKEFMAGAE ENSTTRP00000009784/1-675 MAEFRVRVST GEAFGAGTWD KMSVIIVGTE GETLPLPLDH FGKEFSAGAE 51 100 ENSP00000369530/1-676 EDFQVTLPED VGRVLLLRVH KAPP-VLPLL GPLAPDAWFC RWFQLTPPRG ENSBTAP00000011570/1-714 EDFEVTPPED VGRVLLVRVH KAPPARSRPL APSAGDAWFC RWLQLTPHGA bmy_01717T0/1-677 EDFEVTCPQD VGQVLLLRVL KTPRALLRPF WPLASDAWFC RWFQLTPPRG ENSTTRP00000009784/1-675 EDFKVTCPQD VGRVLLLRVH -APPTLLRPF WPLVSDA-FC RWVQLXXXXX 101 150 ENSP00000369530/1-676 GHLLFPCYQW LEGAGTLVLQ EGTAKVSWAD HHPVLQQQRQ EELQARQEMY ENSBTAP00000011570/1-714 APLCFPCYQW LEGERSLVLR EGTAKISWED HHPTLQQQRR EELQARRETY bmy_01717T0/1-677 APLRFPCYQW LEDKGSLVLR EGTAKISWED HHPTLQQQRQ EELQARRETY ENSTTRP00000009784/1-675 XXXXXXXXXX XXXXGSLVLR EGTAKISWED RHPTLQQQRQ EELQARRETY 151 200 ENSP00000369530/1-676 QWKAYNPGWP HCLDEKTVED LELNIKYSTA KNANFYLQAG SA-------- ENSBTAP00000011570/1-714 RWKTYIPGWP RCLDEETVKN LNLNIKYSVA KNTTFYLRGS SAGPLPSALP bmy_01717T0/1-677 SWKTYIPGWP HCLNEETIKN LDVNIKYSLA KNITFYLRGG SM-------- ENSTTRP00000009784/1-675 SWKTYIPGWP RCLNEETIKN LDLNIKYSLA KNITFYLRGS SM-------- 201 250 ENSP00000369530/1-676 ---------- ---------- ---------F AEMKIKGLLD RKGLWRSLNE ENSBTAP00000011570/1-714 TIRNMGHMTP PRARPLLTTY SHRVMAALGL AELKLKGLLD RKGLWKSLKE bmy_01717T0/1-677 ---------- ---------- ---------L ADLKLKGLLD RKGLWKSLEE ENSTTRP00000009784/1-675 ---------- ---------- ---------L AHLKLKGLLD RKGLWKSLEE 251 300 ENSP00000369530/1-676 MKRIFNFRRT PAAEHAFEHW QEDAFFASQF LNGLNPVLIR RCHYLPKNFP ENSBTAP00000011570/1-714 MRRVFNFRKT PAVEYVCEHW QEDAFFAYQF LNGLNPVLIR RCHHLPKNFP bmy_01717T0/1-677 MRSVFNSQKT PAVEYVFEHW QEDAFFAYQF LNGLNPVLIR RCRHLPKNFP ENSTTRP00000009784/1-675 MRSVFNFWKT PAVEYVFEHW QEDAFFAYQF LNGLNPVLIR RCRHLPKNFP 301 350 ENSP00000369530/1-676 VTDAMVASVL GPGTSLQAEL EKGSLFLVDH GILSGIQTNV INGKPQFSAA ENSBTAP00000011570/1-714 VTDAMVAPVL GPGTSLQAEL EKGSLFLVDY DLLADVRTNV INGRPQFSTA bmy_01717T0/1-677 VTDAMVAPAL GPGTSLQAEL EKGSLFLVDH GILSGIRTNV INGRPQFSAA ENSTTRP00000009784/1-675 VTDAMVAPVL GPGTSLQAEL EKGSLFLVDY GILSGIRTNV INRRPQFSAA 351 400 ENSP00000369530/1-676 PMTLLYQSPG CGPLLPLAIQ LSQTPGPNSP IFLPTDDKWD WLLAKTWVRN ENSBTAP00000011570/1-714 PMTLLYQRPG RGPLLPLAIQ LSQTPGPNSP IFLPSDDKWD WLLAKTWVRN bmy_01717T0/1-677 PMTLLYQRPG SGPLLPLAIQ LSQTPGPDSP IFLPSDDKWD WLLAKTWVRN ENSTTRP00000009784/1-675 PMTLLYQRPG CGPLLPLAIQ LSQTPGPDSP IFLPSDDKWD WLLAKTWVRN 401 450 ENSP00000369530/1-676 AEFSFHEALT HLLHSHLLPE VFTLATLRQL PHCHPLFKLL IPHTRYTLHI ENSBTAP00000011570/1-714 AEFSIHEALT HLLQAHLVPE VFALATLRQL PHCHPLFKLL IPHTRYTLHI bmy_01717T0/1-677 AEFSIHEALT HLLQVHLVTE VFTLATLRQL PHCHPLFKLL IPHTRYTLHI ENSTTRP00000009784/1-675 AEFSIHEALT HLLQVHLVTE VFTLATLRQL PHCHPLFKXX XXXXXXXXXX 451 500 ENSP00000369530/1-676 NTLARELLIV PGQVVDRSTG IGIEGFSELI QRNMKQLNYS LLCLPEDIRT ENSBTAP00000011570/1-714 NTLARERLIA PGQVVDRSTG LGIGGFSELI QKNMKQLNYS ALCLPDDIRA bmy_01717T0/1-677 NTLARELLIA PGKVVDRSTG LGIEGFSELI QRYMEQLNYS VLCLPEDIRA ENSTTRP00000009784/1-675 XXXXXXXXXX XXXXXXRSTG LGIEGFSELI QRYMEQLNYS VLCLPEDIRA 501 550 ENSP00000369530/1-676 RGVEDIPGYY YRDDGMQIWG AVERFVSEII GIYYPSDESV QDDRELQAWV ENSBTAP00000011570/1-714 RGVEDIPDYY YRDDGMQIWG AVERFVSEMI GIYYPSDESV RDDSELQAWV bmy_01717T0/1-677 RGVEDIPGYY YRDDGMQIWG AVEGFVSEMI GIYYLSDEFV RDDSELQAWV ENSTTRP00000009784/1-675 RGVEDIPGYY YRDDGMQIWG AVECFVSEMI GIYYLSDESV RDDSELQAWV 551 600 ENSP00000369530/1-676 REIFSKGFLN QESSGIPSSL ETREALVQYV TMVIFTCSAK HAAVSAGQFD ENSBTAP00000011570/1-714 REIFSEGFLG RESSGLPSTL GTREALIQYV TMVIFNCSAK HSAVSAGQFD bmy_01717T0/1-677 WEIFSEGFLG RESSGVPSSL GTREALIQYI TMVIFTCSAK HSAVGTGQFD ENSTTRP00000009784/1-675 WEIFSEGFLG RESSGVPSSL GTREALIQYV TMVIFTCSAK HSAVGTGQFD 601 650 ENSP00000369530/1-676 SCAWMPNLPP SMQLPPPTSK GLATCEGFIA TLPPVNATCD VILALWLLSK ENSBTAP00000011570/1-714 FAAWMPNLPP SMQLPPPTSK GQARLEGFLA TLPPVNATCD VVIALWLLSK bmy_01717T0/1-677 FSAWMPNLPP TMQLPPPTSK GQASPEGFIA TLPPVNATCD VIVALWVLSK ENSTTRP00000009784/1-675 FSAWMPNLPP TMQLPPPTSK GQASPERFIA TLPPVNATCD VIVALWALSK 651 700 ENSP00000369530/1-676 EPGDQRPLGT YPDEHFTEEA PRRSIATFQS RLAQISRGIQ ERNQGLVLPY ENSBTAP00000011570/1-714 EPGDRRPLGT YPDEYFTEEA PRRSIAAFQS RLAEISRDIQ ERNHSLALPY bmy_01717T0/1-677 EPGDRRPLGT YPDEHFTEAA PCWSIAAFQS RLAQISRDIQ ERNQDLELPY ENSTTRP00000009784/1-675 EPGDRRSLGT YPDEHFTEAA PCWSIAAFQS RLAQISRDIQ ERNQDLELPY 701 750 ENSP00000369530/1-676 TYLDPPLIEN SVSI ENSBTAP00000011570/1-714 PYLDPPLIEN SVSI bmy_01717T0/1-677 TYLDPPIIEN SVSI ENSTTRP00000009784/1-675 TYLDPPIIEN SVSI