KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:03 2014 Check: 00 .. Name: ENSP00000326870/1-523 Len: 523 Check: 5802 Weight: 1.00 Name: ENSTTRP00000007674/1-517 Len: 523 Check: 8873 Weight: 1.00 Name: bmy_19339T0/1-265 Len: 523 Check: 1884 Weight: 1.00 Name: ENSBTAP00000011591/1-522 Len: 523 Check: 4877 Weight: 1.00 Name: BACU005269/1-522 Len: 523 Check: 7513 Weight: 1.00 // 1 50 ENSP00000326870/1-523 MNQPCNSMEP RVMDDDMLKL AVGDQGPQEE AGQLAKQEGI LFKDVLSLQL ENSTTRP00000007674/1-517 MNRLCD-VEP RVMDDEMLKL AVGEQGPRDE AGQLAKQEGI LFKDVLSLQL bmy_19339T0/1-265 MNRLCD-MEP RVMDDEMLKL AVGQQGPRDE AGQLAKQEGI LFKDVLSLQL ENSBTAP00000011591/1-522 MNRLYD-MEP RVMDDDMLKL AVGEQGPREE AGQLAKQEGI LFKDVVSLQL BACU005269/1-522 MNRLCD-MEP RVMDDEMLKL AVGEQGPRDE AGQLAKQEGI LFKDVLSLQL 51 100 ENSP00000326870/1-523 DFRNILRIDN LWQFENLRKL QLDNNIIEKI EGLENLAHLV WLDLSFNNIE ENSTTRP00000007674/1-517 DFQNILRIDN LWQFENLRKL QLDNNIIEKI EGLENLTHLV WLDLSFNNIE bmy_19339T0/1-265 DFHNILRIDS LWQFENLRKL QLDNNIIEKI EGLENLTRLV WLDLSFNNIE ENSBTAP00000011591/1-522 DFQNILRIDN LWQFESLQKL QLDNNIIEKI EGLENLTRLV WLDLSFNNIE BACU005269/1-522 DFQNILRIDS LWQFENLRKL QLDNNVIEKI EGLENLTRLV WLDLSFNNIE 101 150 ENSP00000326870/1-523 TIEGLDTLVN LEDLSLFNNR ISKIDSLDAL VKLQVLSLGN NRIDNMMNII ENSTTRP00000007674/1-517 AIEGLDTLVN LEDLSLFNNR ISKIDSLDAL VKLQVLSLGN NQIGNMTNXX bmy_19339T0/1-265 AIEGLDTLVN LEDLSLFNNR ISKIDSLDAL VKLQVLSLGN NQIGNMMNVI ENSBTAP00000011591/1-522 AIEGLDTLVN LEDLSLFNNR ISKIDSLDAL VKLQVLSLGN NHIGNMMNII BACU005269/1-522 AIEGLDTLVN LEDLSLFNNR ISKIDSLDAL AKLQVLSLGN NQIGNMMNII 151 200 ENSP00000326870/1-523 YLRRFKCLRT LSLSRNPISE AEDYKMFICA YLPDLMYLDY RRIDDHTKKL ENSTTRP00000007674/1-517 XXXXXXXXXX XXXXXXXXXX XXXYRTFICA YLPDLVYLDF QRIDDHMKEL bmy_19339T0/1-265 YLRRFKDLRT LSLSGNPVAE AEDYRTCICA YLPDLVYLDF RRIDDQMKEL ENSBTAP00000011591/1-522 YLRRFKALRT LSLSGNPVAE DEDYKMFICA YLPDLVYLDF RRLDDHMKEL BACU005269/1-522 YLRRFKDLRT LSLSGNPVAE AEDYRTCICA YLPDLVYLDF RRIDDQTKEL 201 250 ENSP00000326870/1-523 AEAKHQYSID ELKHQENLMQ AQLEDEQAQR EELEKHKTAF VEHLNGSFLF ENSTTRP00000007674/1-517 AEMKHQCSVD ELKHQESLMQ AQLEEEQARW EELEGHKAAF VEHLNGPFLF bmy_19339T0/1-265 AEMKHQYSMD ELKHRESLMQ ARLEGEQARR EELAEHE--- ---------- ENSBTAP00000011591/1-522 AEMKHQYSID ELKHRENLMQ ARLEDEQARR EELEEHKAAF VEQLNGTFLF BACU005269/1-522 AEMKHQYSVD ELKHRESLMQ ARLEDERARR EELAEHEAAF VEHLNGPFLF 251 300 ENSP00000326870/1-523 DSMYAEDSEG NNLSYLPGVG ELLETYKDKF VIICVNIFEY GLKQQEKRKT ENSTTRP00000007674/1-517 DSMYAEDVEG SQLSHLPGVG ELVQ-YKDKF VVICLNIFKF GMKQQEKRKA bmy_19339T0/1-265 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011591/1-522 DSMYAEDVEG SKLSHLPGVG ELLEAYKDKF VIICLNIFEY GLKQQEKRKA BACU005269/1-522 DSMYAEDVEG SQLSHLPGVG ELLQTYKDKF VIICLNIFEY GLKQQEKRKA 301 350 ENSP00000326870/1-523 ELDTFSECVR EAIQENQEQG KRKIAKFEEK HLSSLSAIRE ELELPNIEKM ENSTTRP00000007674/1-517 ELDTFMGCVQ EAIQEKQEQG KHEIAKFEEK HLLTLSSIRD ESELTNFEIK bmy_19339T0/1-265 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011591/1-522 ELDTFMECVQ EAIQENQEQG KLKIAKFEEK HLLSLNAIRE ESELSSIETK BACU005269/1-522 ELDTFMGCVQ EAVQEKQEQG KHKIAKFEEK HLLSLSSIRD ESELTNFEIK 351 400 ENSP00000326870/1-523 ILECSADISE LFDALMTLEM QLVEQLEETI NMFERNIVDM VGLFIENVQS ENSTTRP00000007674/1-517 MAEHSENITE LVNVLMTLEM QLVEQLEETI NMFERNIIDL VGLFVENVQS bmy_19339T0/1-265 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011591/1-522 IVEYSEDITE LFNVLMTLEM QLVEQLEETI NMFERNIIDL VGLFVENVQS BACU005269/1-522 MAEYSEDITE LANVLMTLEM QLVEQLEETI NMFERNIIDL VGLFVENVQS 401 450 ENSP00000326870/1-523 LMAQCRDLEN HHHEKLLEIS ISTLEKIVEG DLDEDLPNDL RALFVDKDTI ENSTTRP00000007674/1-517 LMAQCRDLEN HHHEKLLEIA ISTREKIVKG ELDEDLPDAV RALFVDKDTI bmy_19339T0/1-265 ---------- ---------- -------VRG ---------- ---------- ENSBTAP00000011591/1-522 LMAQCRDLEN HHHEKLLEIA INILEKIVKG EMDEDLPDDV RSLFVDKDTI BACU005269/1-522 LMAQCRDLEN HHHEKLLEIA ISTLEKIVKG ELDEDLPDAV RSLFVDKDTI 451 500 ENSP00000326870/1-523 VNAVGASHDI HLLKIDNRED ELVTRINSWC TRLIDRIHKD EIMRNRKRVK ENSTTRP00000007674/1-517 VNAVGVSHDI HLLI--DIGD ELVTR-HSWR AHL-DKIHKD EIMRNRRRMK bmy_19339T0/1-265 ---------- ---------- ------HRW- --------ED PLPTPPPRPP ENSBTAP00000011591/1-522 VNAVGASHDI HLLKIDNRED ELVTRVNSWC THLLDKIHKD EIMRNRKRVK BACU005269/1-522 VNAVGASHDI HLLKIDNRED ELVTRVNSWC AHLVDKIHKD EIMRNRRRVK 501 550 ENSP00000326870/1-523 EINQYIDHMQ SELDNLECGD ILD ENSTTRP00000007674/1-517 EINQYVDHVQ SELDSLEYSD LLD bmy_19339T0/1-265 E--------- ---DAAAGHG PVP ENSBTAP00000011591/1-522 EINQYVDHVQ SELDSLECGD LLD BACU005269/1-522 EINQYIDHVQ SELDSLECSD LLD