KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:03 2014 Check: 00 .. Name: ENSP00000362991/1-395 Len: 411 Check: 1913 Weight: 1.00 Name: ENSTTRP00000007105/1-390 Len: 411 Check: 4338 Weight: 1.00 Name: ENSBTAP00000011592/1-409 Len: 411 Check: 1195 Weight: 1.00 Name: bmy_18068T0/1-399 Len: 411 Check: 1577 Weight: 1.00 Name: BACU019321/1-399 Len: 411 Check: 6889 Weight: 1.00 // 1 50 ENSP00000362991/1-395 MPWSSRGALL RDLVLGVLGT AAFLLDLGTD LWAAVQYALG GRYLWAALVL ENSTTRP00000007105/1-390 MPWSPRAALF WDLVLGVLGT LAFLIDLGAD LWAASQYVLS GRYLWAALVL ENSBTAP00000011592/1-409 MPWSPRAVLL RDLVLGILGT LAFLIDLGAD LWAASQYVLS GRYLWAALVL bmy_18068T0/1-399 MPWSPRAALF WDLVLGVLGT LAFVIDLGAD LWAASQYVLS GRYLWAALVL BACU019321/1-399 MPWSPRAALF WDLVLGVLGT LAFLIDLGAD LWAASQYALS GRYLWAALVL 51 100 ENSP00000362991/1-395 ALLGLASVAL QLFSWLWLRA DPAGLHGSQP PRRCLALLHL LQLGYLYRCV ENSTTRP00000007105/1-390 ALLGLSSVAL QLFSWVWLRA DLSSPHAPKP PGHCLALLHV LQLGYLYRCV ENSBTAP00000011592/1-409 ALLGLASVAL QLFSWIWLHS DVSSPLAPKP PGRHLALLHL LQLGYLYRCV bmy_18068T0/1-399 ALLGLASVAL QLFSWVWLRA DLSSPHAPRP PGHCLALLHV LQLGYLYRCV BACU019321/1-399 ALLGLASVAL QLFSWVWLRA DLSSPHAPKP PGHCLALLHV LQLGYLYRCV 101 150 ENSP00000362991/1-395 QELRQGLLVW QQEEPSEFDL AYADFLALDI SMLRLFETFL ETAPQLTLVL ENSTTRP00000007105/1-390 QGLRQGLLVW RQEVPTQFDL AYADFLSLDI SMLRLFETFL EMTPQLTLVL ENSBTAP00000011592/1-409 QGLQQGLLVW RQEAPSEFDL AYADFLSLDI SMLRLFETFL ETTPQLTLVL bmy_18068T0/1-399 QGLRQGLLVW RQEVPSEFDL AYADFLSLDI SMLRLFETFL EMTPQLTLVL BACU019321/1-399 QGLRQGLLVW RQEVPSEFDL AYADFLSLDI SMLRLFETFL EMTPQLTLVL 151 200 ENSP00000362991/1-395 AIMLQSGRAE YYQWVGICTS FLGISWALLD YHRALRTCLP SKPLLGLGSS ENSTTRP00000007105/1-390 AIMLQSGSAE YYQWVSICTS FVGISWALLD YHRALRTCLP SKPLLGLGAS ENSBTAP00000011592/1-409 AIILQSGSAE YYQWVSICTS FVGISWALLD YHRALRTCLP AKLLLGPGAS bmy_18068T0/1-399 AIMLQSGSAE YYQWVSICTS FVGISWALLD YHRALRTCLP SKPLLGLGAS BACU019321/1-399 AIMLQSGSAE YYQWLSICTS FVGISWALLD YHRALHTCLP SKPLLGLGAS 201 250 ENSP00000362991/1-395 VIYFLWNLLL LWPRVLAVAL FSALFPSYVA LHFLGLWLVL LLWVWLQGTD ENSTTRP00000007105/1-390 VIYFLWNLLL LWPRVLVVAL FSALFPRCVA LHFLGLWLVL LFWVWLQGTD ENSBTAP00000011592/1-409 VIYFLWNLLL LWPRVLVVAL FSALFPRYVA LHFLGLWLVF LFWVWLQGTD bmy_18068T0/1-399 VIYFLWNLLL LWPRVLVVAL FSALFPRYVA LHFLGLWLVL LFWVWLQGTD BACU019321/1-399 VIYFLWNLLL LWPRVLVVAL FSALFPRYVA LHFLGLWLVL LFWVWLQGTD 251 300 ENSP00000362991/1-395 FMPDPSSEWL YRVTVATILY FSWFNVAEGR TRGRAIIHFA FLLSDSILLV ENSTTRP00000007105/1-390 FMPDPCSE-- LRATV--ILY FSXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000011592/1-409 FMPGPHSEWL YRATVATILY FSWFNVAEGH TRGRATIHLV FLLNDSLLLV bmy_18068T0/1-399 FMPDPCSEWL YRATVATILY FSWFNVAEGR TRGRATIHLA FLLNDSLLLV BACU019321/1-399 FMPDPCSEWL YRATVATILY FSWFNVAEDR TRGRATIHLA FLLNDSLLLA 301 350 ENSP00000362991/1-395 ATWVTHSSWL PSGIPLQLWL PVGCGCFFLG LALRLVYYHW LHPSCCWKPD ENSTTRP00000007105/1-390 XXXXXXSTWL PSGCLLQRLL PACRACFLLG LALRLVYYRW LHPSCRW--E ENSBTAP00000011592/1-409 VAWATQSAWL PSGRLLQSLL PAAGVCFLLG LALRLAYYCW LHPSRRW--E bmy_18068T0/1-399 VAWVTQSTWL PSGCLLQRLL PAAGACFLLG LALRLVYYRW LHPSCRW--E BACU019321/1-399 VAWVAQSAWL PSGCLLQRLL PAAGACFLLG LALRLAYYRW LHPSCRW--G 351 400 ENSP00000362991/1-395 PDQVDGARSL LSPEGYQLPQ NRRMTHLAQK FFPKAKDEAA SPVKG----- ENSTTRP00000007105/1-390 PDQVDGTRGL HSLEGRQLPQ NRRMAHLAKN FFPKGRDEAA LPWKGE---- ENSBTAP00000011592/1-409 PDQVDGTWGL HSLEERQLLQ NRRMAHLAKN FFPKARDEAV LPWKGEMNGI bmy_18068T0/1-399 PDQLDGTWGL RSLEGRQLPQ NRRMAHLAKN FFPKSRDEAA LPWKGEVNGV BACU019321/1-399 PDQLDGTWGL RSLEGRQLPQ NRRMAHLAKN FFPKGRDEAA LPWKGEVNGV 401 450 ENSP00000362991/1-395 ---------- - ENSTTRP00000007105/1-390 ---------- - ENSBTAP00000011592/1-409 LKAGSDPARE T bmy_18068T0/1-399 L--------- - BACU019321/1-399 L--------- -