KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:03 2014 Check: 00 .. Name: ENSTTRP00000007682/1-289 Len: 348 Check: 7436 Weight: 1.00 Name: ENSP00000417190/1-289 Len: 348 Check: 5651 Weight: 1.00 Name: ENSBTAP00000011594/1-289 Len: 348 Check: 8664 Weight: 1.00 Name: bmy_19340T0/1-348 Len: 348 Check: 3031 Weight: 1.00 Name: BACU005268/1-249 Len: 348 Check: 5911 Weight: 1.00 // 1 50 ENSTTRP00000007682/1-289 ---------- ---------- ---------- ---------- ---------- ENSP00000417190/1-289 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011594/1-289 ---------- ---------- ---------- ---------- ---------- bmy_19340T0/1-348 PRVSCATWRR PARLRTPAAG EKLRPSVKLC AARARSVRSL RSVFPALRSR BACU005268/1-249 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007682/1-289 ---------M WRSCLRLRGG GRHLLNCPRG GLTASRGPGP KPPAHARAYA ENSP00000417190/1-289 ---------M WRSCLRLRDG GRRLLNRPAG GPSASMSPGP TIPSPARAYA ENSBTAP00000011594/1-289 ---------M WRRCLRLRDV GRRLLNLPRS GLTASEGLGP KLPTPIRAYV bmy_19340T0/1-348 AVVLPGPRAM WRSCLRLRGG GRHLLNCPRG GLTASEGPGP KPPARARAYA BACU005268/1-249 ---------I F--------- ---------- ---------- ---------- 101 150 ENSTTRP00000007682/1-289 PPAERKRFYR NVSITQGEAG FEINLDHRKL RTPQAKLFTV PSEALAVAVA ENSP00000417190/1-289 PPTERKRFYQ NVSITQGEGG FEINLDHRKL KTPQAKLFTV PSEALAIAVA ENSBTAP00000011594/1-289 PPAERKRFYQ NVSISQGEGG FEINLDHRKL RTPQGKLFTV PSEALAIAVA bmy_19340T0/1-348 PPAERKRFYQ NVSITQGEGG FEINLDHRKL RTPQAKLFTV PSEALAVAVA BACU005268/1-249 -PTERKRFYQ NVSITQGEGG FEINLDHRKL RTPQAKLFTV PSEALAVAVA 151 200 ENSTTRP00000007682/1-289 TEWDSQQDTI KTYTMHLTTL CNTSLDNPTQ RDKDQLIWAA AKFLDTDTVX ENSP00000417190/1-289 TEWDSQQDTI KYYTMHLTTL CNTSLDNPTQ RNKDQLIRAA VKFLDTDTIC ENSBTAP00000011594/1-289 TEWDSQQDTI KMYTMHLTTL CNTSLDNPTQ RDKDQLIRAA VKFLDTDTVC bmy_19340T0/1-348 TEWDSQQDTI KAYTMHLTTL CNTSLDNPTQ RGKDQLIQAA AKFLDSDTVC BACU005268/1-249 TEWDSQQDTI KAYTMHLTTL CNTSLDNPTQ RGKDQLIQAA AKFLDTDTVC 201 250 ENSTTRP00000007682/1-289 XXXXXXXXXX XXXXXXXXXX XXXXXXXYGV KIGSSTSIMG PSIPARTREV ENSP00000417190/1-289 YRVEEPETLV ELQRNEWDPI IEWAEKRYGV EISSSTSIMG PSIPAKTREV ENSBTAP00000011594/1-289 YRVEEPETLV ELQRNEWDPV ISWAEKRYGV EIGSSTSITG PSIPARTREV bmy_19340T0/1-348 YRVEEPETLV ELQRNEWDPV IGWAERRYGV KIGSSTSIMG PSIPARTREV BACU005268/1-249 YRVEEPETLV ELQRNEWDPV IGWAERRYGV KIGSSTSIMG PSIPARTREV 251 300 ENSTTRP00000007682/1-289 LVSHLASYNM WALQGIEFVV SQLKSMVLTL GLIDLHLTVE QAVLLSRLEE ENSP00000417190/1-289 LVSHLASYNT WALQGIEFVA AQLKSMVLTL GLIDLRLTVE QAVLLSRLEE ENSBTAP00000011594/1-289 LVSHLASYNM WALQGIEFVV TQLKSLVLTL GLTDLRLTVE QAVLLSRLEE bmy_19340T0/1-348 LVSHLASYNT WALQGIEFVV SQLKSMVLTL GLIDLHLTVE QAVLLSRLEE BACU005268/1-249 LVSHLASYNT WALQGIEFVV SQLKSMVLTL GLIDLHLTVE QAVLLSRLEE 301 350 ENSTTRP00000007682/1-289 AFQIQKWGNV EWAHDYELRD LRARTAAGAL FVQLCSESSA VKHKLLQG ENSP00000417190/1-289 EYQIQKWGNI EWAHDYELQE LRARTAAGTL FIHLCSESTT VKHKLLKE ENSBTAP00000011594/1-289 EYQIQKWGNI EWAHDYELQE LRARTAAGTL FVHLCSESTA VKHKLLQG bmy_19340T0/1-348 AFQIQKWGNV EWAHDYEVQD LRARTAAGAL FVHLCSESSA VKHKLLQG BACU005268/1-249 TFQIQKWGNV EWAHDYEVWD LRARTAAGAL FVHLCSESSA VKHKLLQG