KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:44:04 2014 Check: 00 .. Name: ENSTTRP00000007694/1-289 Len: 300 Check: 7143 Weight: 1.00 Name: ENSP00000268719/1-300 Len: 300 Check: 3235 Weight: 1.00 Name: bmy_19341T0/1-253 Len: 300 Check: 498 Weight: 1.00 Name: ENSBTAP00000011595/1-217 Len: 300 Check: 5943 Weight: 1.00 // 1 50 ENSTTRP00000007694/1-289 -CVRAQAGRG L-LSTRRPCS QVPGSRWRPE RSDRRRPAG- -PSRP----A ENSP00000268719/1-300 MCARGQVGRG TQLRTGRPCS QVPGSRWRPE RLLRRQRAGG RPSRPHPARA bmy_19341T0/1-253 ---------- ---------- ---------- ---------- -PSRP----T ENSBTAP00000011595/1-217 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007694/1-289 RAGLT-PATL LGSRAAVVPP P--PPALAPG DPAMPVRTEC PPPAGASATS ENSP00000268719/1-300 RPGLSLPATL LGSRAAAAVP LPLPPALAPG DPAMPVRTEC PPPAGASAAS bmy_19341T0/1-253 RAPALPPGSL LGSRAAAVPP P--PPALAPG DPAMPVRTEC PPPAGASAAS ENSBTAP00000011595/1-217 ---------- ---------- ---------- ---MPVRTEC PPPAGASAAS 101 150 ENSTTRP00000007694/1-289 AASLIPPPPI NTQQPGVATS LLYSGSKFRG HQKSKGNSYD VEVVLQHVDT ENSP00000268719/1-300 AASLIPPPPI NTQQPGVATS LLYSGSKFRG HQKSKGNSYD VEVVLQHVDT bmy_19341T0/1-253 AASLIPPPPI NTQQPGVATS LLYSGSKFRG HQKSKGNSYD VEVVLQHVDT ENSBTAP00000011595/1-217 AASLIPPPPI NTQQPGVATS LLYSGSKFRG HQKSKGNSYD VEVVLQHVDT 151 200 ENSTTRP00000007694/1-289 GNSYLCGYLK IKGLTEEYPT LTTFFEGEII SKKHPFLTRK WDADEDVDRK ENSP00000268719/1-300 GNSYLCGYLK IKGLTEEYPT LTTFFEGEII SKKHPFLTRK WDADEDVDRK bmy_19341T0/1-253 GNSYLCGYLK IKGLTEEYPT LTTFFEGEII SKKHPFLTRK WDADEDVDRK ENSBTAP00000011595/1-217 GNSYLCGYLK IKGLTEEYPT LTTFFEGEII SRKHPFLTRK WDADEDVDRK 201 250 ENSTTRP00000007694/1-289 HWGKFLAFYQ YAKSFNSDDF DYEELKSGDY VFMRWKEQFL VPDHTIKDIS ENSP00000268719/1-300 HWGKFLAFYQ YAKSFNSDDF DYEELKNGDY VFMRWKEQFL VPDHTIKDIS bmy_19341T0/1-253 HWGKFLAFYQ YAKSFNSDDF DYEELKSGDY VFMRWKEQFL VPDHTIKDIS ENSBTAP00000011595/1-217 HWGKFLAFYQ YAKSFNSDDF DYEELKSGDY VFMRWKEQFL VPDHTIKDIS 251 300 ENSTTRP00000007694/1-289 GASFAGFYYI CFQKSAASIE GYYYHRSSEW YQSLNLTHVP EHSAPIYEFR ENSP00000268719/1-300 GASFAGFYYI CFQKSAASIE GYYYHRSSEW YQSLNLTHVP EHSAPIYEFR bmy_19341T0/1-253 GASFAGFYYI CFQKSAASIE GYYYHRSSEW YQSLNLTHVP EHSAPIYEFR ENSBTAP00000011595/1-217 GASFAGFYYI CFQKSAASIE GYYYHRSSEW YQSLNLTHVP EHSAPIYEFR