KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:04 2014 Check: 00 .. Name: ENSTTRP00000013334/1-489 Len: 521 Check: 1018 Weight: 1.00 Name: bmy_19712T0/1-354 Len: 521 Check: 3687 Weight: 1.00 Name: BACU001043/1-512 Len: 521 Check: 4743 Weight: 1.00 Name: ENSP00000369681/1-520 Len: 521 Check: 9713 Weight: 1.00 Name: ENSBTAP00000011598/1-521 Len: 521 Check: 9031 Weight: 1.00 // 1 50 ENSTTRP00000013334/1-489 ---------- ---------- ---------- --CRSNKSPW VCLTCSSVHC bmy_19712T0/1-354 ---------M GLKPEEEGGK DSHGAKQKGN RVCRSNKSPW VCLTCSSVHC BACU001043/1-512 ---------M GLKPEEEGGK DAHGAKRKGN RVCRSNKSPW VCLTCSSVHC ENSP00000369681/1-520 MECPHLSSSV CIAPDSAKFP NGSPSSWCCS -VCRSNKSPW VCLTCSSVHC ENSBTAP00000011598/1-521 MECPHLSSSV CIAPDSAKFP NGSPSSWCCS AVCRSNKSPW VCLTCSSVHC 51 100 ENSTTRP00000013334/1-489 GRYVNGHAKK HYEDAQIPLT NHKKSEKQEK AQHTVCMDCS SYSTYCYRCD bmy_19712T0/1-354 GRYVNGHAKK HYEDAQIPLT NHKKSEKQEK AQHTVCMDCS SYSTYCYRCD BACU001043/1-512 GRYVNGHAKK HYEDAQIPLT NHKKSEKQEK AQHTVCMDCS SYSAYCYRCD ENSP00000369681/1-520 GRYVNGHAKK HYEDAQVPLT NHKKSEKQDK VQHTVCMDCS SYSTYCYRCD ENSBTAP00000011598/1-521 GRYVNGHAKK HYEDAQIPLT NHKKSEKQEK AQHTVCMDCS SYSTYCYRCD 101 150 ENSTTRP00000013334/1-489 DFVINDTKLG LVQKVREHLQ NLENSAFTAD RHRKRKLLEN SSLNSKLLKV bmy_19712T0/1-354 DFVINDTKLG LVQKVREHLQ NLENSAFTAD RHRKRKLLEN SSLNSKLLKV BACU001043/1-512 DFVINDTKLG LVQKVREHLQ NLENSAFTAD RHRKRKLLEN SSLNSKLLKV ENSP00000369681/1-520 DFVVNDTKLG LVQKVREHLQ NLENSAFTAD RHKKRKLLEN STLNSKLLKV ENSBTAP00000011598/1-521 DFVVNDTKLG LVQKVREHLQ NLENSAFTAD RHRKRKLLEN SSLNSKLLKV 151 200 ENSTTRP00000013334/1-489 NGSTTAICAT GLRNLGNTCF MNAILQSLXX XXXXXXXXXX XXXXXXXXXX bmy_19712T0/1-354 NGSTTAICAT GLRNLGNTCF MNAILH---N IEQFCCYFKE LPAVELRNGK BACU001043/1-512 NGSTTAICAT GLRNLGNTCF MNAILQSLSN IEQFCCYFKE LPAVELRNGK ENSP00000369681/1-520 NGSTTAICAT GLRNLGNTCF MNAILQSLSN IEQFCCYFKE LPAVELRNGK ENSBTAP00000011598/1-521 NGSTTAICAT GLRNLGNTCF MNAILQSLSN IEQFCCYFKE LPAVELRNGK 201 250 ENSTTRP00000013334/1-489 XXXXXXXXXX XXGDNNVSLV EEFRKTLCAL WQGSQTAFSP ESLFYVVWKI bmy_19712T0/1-354 TAGRRTYHTR SQGDNNVSLV EEFRKTLCAL WQGSQTAFSP ESLFYVVWKI BACU001043/1-512 TAGRRTYHTR SQGDNNVSLV EEFRKTLCAL WQGSQTAFSP ESLFYVVWKI ENSP00000369681/1-520 TAGRRTYHTR SQGDNNVSLV EEFRKTLCAL WQGSQTAFSP ESLFYVVWKI ENSBTAP00000011598/1-521 TAGRRTYHTR SQGENNVSLV EEFRKTLCAL WQGSQTAFSP ESLFYVVWKI 251 300 ENSTTRP00000013334/1-489 MPNFRGYQQQ DAHEFMRYLL DHLHLELQGG FNGISRSSIL QENSTLSASN bmy_19712T0/1-354 MPNFRGYQQQ DAHEFMRYLL DHLHLELQGG FNGISRSSIL QENSTLSASN BACU001043/1-512 MPNFRGYQQQ DAHEFMRYLL DHLHLELQGG FNGISRSSIL QENSTLSASN ENSP00000369681/1-520 MPNFRGYQQQ DAHEFMRYLL DHLHLELQGG FNGVSRSAIL QENSTLSASN ENSBTAP00000011598/1-521 MPNFRGYQQQ DAHEFMRYLL DHLHLELQGG FNGISRSSIL QENSTLSASN 301 350 ENSTTRP00000013334/1-489 KCCINGASTV VTAIFGGILQ NEVNCLICGT ESRKFDPFLD LSLDIPSQFR bmy_19712T0/1-354 KCCINGASTV VTAIFGGILQ NEVNCLICGT ESRKFDPFLD LSLDIPSQFR BACU001043/1-512 KCCINGASTV VTAIFGGILQ NEVNCLICGT ESRKFDPFLD LSLDIPSQFR ENSP00000369681/1-520 KCCINGASTV VTAIFGGILQ NEVNCLICGT ESRKFDPFLD LSLDIPSQFR ENSBTAP00000011598/1-521 KCCINGASTV VTAIFGGILQ NEVNCLICGT ESRKFDPFLD LSLDIPSQFR 351 400 ENSTTRP00000013334/1-489 NKRSKNQENG PVCSLRDCLR SFTDLEELDE TELYMCHKCK KKQKSTKKFW bmy_19712T0/1-354 NKRSKNQENG PVCSLR---- ---------- ---------- ---------- BACU001043/1-512 NKRSKNQENG PVCSLRDCLR SFTDLEELDE TELYMCHKCK KKQKSTKKFW ENSP00000369681/1-520 SKRSKNQENG PVCSLRDCLR SFTDLEELDE TELYMCHKCK KKQKSTKKFW ENSBTAP00000011598/1-521 NKRSKNQENG PTCSLRDCLR SFTDLEELDE TELYMCHKCK KKQKSTKKFW 401 450 ENSTTRP00000013334/1-489 IQKLPKVLCL HLKRFHWTAY LRNKVDTYVE FPLRGLDMKC YLLEPENSGP bmy_19712T0/1-354 ---------- ---------- ---------- ---------- ---------- BACU001043/1-512 IQKLPKVLCL HLKRFHWTAY LRNKVDTYVE FPLRGLDMKC YLLEPENSGP ENSP00000369681/1-520 IQKLPKVLCL HLKRFHWTAY LRNKVDTYVE FPLRGLDMKC YLLEPENSGP ENSBTAP00000011598/1-521 IQKLPKVLCL HLKRFHWTAY LRNKVDTYVE FPLRGLDMKC YLLEPENSGP 451 500 ENSTTRP00000013334/1-489 ENCLYDLAAV VVHHGSGVGS GHYTAYATHE GRWFHFNDST VTLTDEDTVV bmy_19712T0/1-354 ---------- ---------- ---------- ---------- ---------- BACU001043/1-512 ENCLYDLAAV VVHHGSGVGS GHYTAYATHE GRWFHFNDST VTLTDEDTVV ENSP00000369681/1-520 ESCLYDLAAV VVHHGSGVGS GHYTAYATHE GRWFHFNDST VTLTDEETVV ENSBTAP00000011598/1-521 ENCLYDLAAV VVHHGSGVGS GHYTAYATHE GRWFHFNDST VTLTDEDTVL 501 550 ENSTTRP00000013334/1-489 KAKAYILFYV ERQAKAGSDK L bmy_19712T0/1-354 ---------- ---------- - BACU001043/1-512 KAKAYILFYV ERQAKAGSDK L ENSP00000369681/1-520 KAKAYILFYV EHQAKAGSDK L ENSBTAP00000011598/1-521 KAKAYILFYV ERQAKAGSDK L