KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:04 2014 Check: 00 .. Name: ENSP00000353794/1-247 Len: 311 Check: 8897 Weight: 1.00 Name: ENSTTRP00000013340/1-150 Len: 311 Check: 6324 Weight: 1.00 Name: ENSBTAP00000011600/1-226 Len: 311 Check: 5878 Weight: 1.00 Name: bmy_19710T0/1-283 Len: 311 Check: 3114 Weight: 1.00 Name: BACU001044/1-226 Len: 311 Check: 8888 Weight: 1.00 // 1 50 ENSP00000353794/1-247 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013340/1-150 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011600/1-226 ---------- ---------- ---------- ---------- ---------- bmy_19710T0/1-283 MSGSGLPPSS QQQHQLLAKN KHHSSTIYVH QPRAGEEQQE VEVRSPGSSH BACU001044/1-226 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000353794/1-247 -MWPLLTMHI TQLNRECLLH LFSFLDKDSR KSLARTCSQL HDVFEDPALW ENSTTRP00000013340/1-150 -------MHI TQLNRECLLH LFSFLDKDSR KNLARTCPQL QDVFEDPALW ENSBTAP00000011600/1-226 -------MHI TQLNRECLLH LFSFLDKDSR KNLARTCPQL QDVFEDPALW bmy_19710T0/1-283 TXWLLCTMHI TQLNRECLLH LFSFLDKDSR KNLARTCPQL QDVFEDPALW BACU001044/1-226 -------MHI TQLNRECLLH LFSFLDKDSR KNLARTCPQL QDVFEDPALW 101 150 ENSP00000353794/1-247 SLLHFRSLTE LQKDNFLLGP ALRSLSICWH SSRVQVCSIE DWLKSAFQRS ENSTTRP00000013340/1-150 PLLHFRSLTE LKKDNFLLSP ALRSLSICWH SSRVQVCSIE DWLKSALQRS ENSBTAP00000011600/1-226 PLLHFRSLTE LKKDNFLLSP ALRSLSICWH SSRVQVCSIE DWLKSALQRN bmy_19710T0/1-283 PLLHFRSLTE LKKDNFLLSP ALRSLSICWH SSRVQVCSIE DWLKSALQRS BACU001044/1-226 PLLHFRSLTE LKKDNFLLSP ALRSLSICWH SSRVQVCSIE DWLKSALQRS 151 200 ENSP00000353794/1-247 ICSRHESLVN DFLLRVCDRL SAVRSPRRRE APAPSSGTPI AVGPKSPRWG ENSTTRP00000013340/1-150 ICSRHESLVS DFLLQVCDRF SAWRCRALS- -PYSPAESAV GGGGSKPPW- ENSBTAP00000011600/1-226 ICSRHESLVN DFLLQVCDRC PNLASVTLSG CGHVTDDCLA RLLRCCPRLR bmy_19710T0/1-283 ICSRHESLVS DFLLQVCDRC PNLASVTLSG CGHVTDDCLA RLLRSCPRLR BACU001044/1-226 ICSRHESLVS DFLLQVCDRC PNLASVTLSG CGHVTDDCLA RLLRSCPRLR 201 250 ENSP00000353794/1-247 GPDHSEFADL RSGVTGARAA ARRGLGSLRA ERPSETPPAP GVSWGPPPPG ENSTTRP00000013340/1-150 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011600/1-226 ALHLENCARV TNRTLTAVAA HGRALQTLHV DFCRNVSAA- ---------- bmy_19710T0/1-283 ALRLENCARV TNRTLTAVAA HGRALQTLHV DFCRNVSAA- ---------- BACU001044/1-226 ALRLENCARV TNRTLTAVAA HGRALQTLHV DFCRNVSAA- ---------- 251 300 ENSP00000353794/1-247 APVVISVKQE EGKQGRTGRR SHRAAPPCGF ARTR----VC PPTFPGADAF ENSTTRP00000013340/1-150 ---------- ---------- ---------- --------VG RSELPGGR-- ENSBTAP00000011600/1-226 ---------- -------GLR RLRAACPRLT LRAEHSAAMI PDQLPRGPHA bmy_19710T0/1-283 ---------- -------GLR RLRAACPRLT LRAEHSAAMI PDETPRGLRS BACU001044/1-226 ---------- -------GLR RLRTACPRLT LRAEHSAAMI PDQPPRGLRS 301 350 ENSP00000353794/1-247 PQ-------- - ENSTTRP00000013340/1-150 ---------- - ENSBTAP00000011600/1-226 PGAALRKLLL R bmy_19710T0/1-283 PGAALRKQLL R BACU001044/1-226 PGAALRKQLL R