KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:07 2014 Check: 00 .. Name: ENSTTRP00000005368/1-744 Len: 775 Check: 8264 Weight: 1.00 Name: ENSBTAP00000011609/1-744 Len: 775 Check: 6923 Weight: 1.00 Name: ENSP00000339659/1-771 Len: 775 Check: 4164 Weight: 1.00 Name: bmy_18174T0/1-704 Len: 775 Check: 6367 Weight: 1.00 Name: BACU013580/1-761 Len: 775 Check: 1865 Weight: 1.00 // 1 50 ENSTTRP00000005368/1-744 ---------- ---------- -------MAS EATNIPSPVV RQIDKQFLIC ENSBTAP00000011609/1-744 ---------- ---------- -------MAS EATNIPSPVV RQIDKQFLIC ENSP00000339659/1-771 MHRSGRYGTQ QQRAGSKTAG PPCQWSRMAS EGTNIPSPVV RQIDKQFLIC bmy_18174T0/1-704 ---------- ---------M EPPLWA---- ---------- ---------- BACU013580/1-761 ---------- QQRAGSKTAG PPCQWSRMAS EATNIPSPVV RQIDKQFLIC 51 100 ENSTTRP00000005368/1-744 SICLERYKNP KVLPCLHTFC ERCLQNYIPA HSLTLSCPVC RQTSILPEKG ENSBTAP00000011609/1-744 SICLERYKNP KVLPCLHTFC ERCLQNYIPA HSLTLSCPVC RQTSILPEKG ENSP00000339659/1-771 SICLERYKNP KVLPCLHTFC ERCLQNYIPA HSLTLSCPVC RQTSILPEKG bmy_18174T0/1-704 ---------- ---------- -RCLQNYIPA HSLTLSCPVC RQTSILPEKG BACU013580/1-761 SICLERYKNP KVLPCLHTFC ERCLQNYIPA HSLTLSCPVC RQTSILPEKG 101 150 ENSTTRP00000005368/1-744 VAALQNNFFI TNLMDVLQRT PGSNAEESSI LETVTAVAAG KPLSCPNHDG ENSBTAP00000011609/1-744 VAALQNNFFI TNLMDVLQRS PGSSAEESSI LETVTAVAAG KPLSCPNHDG ENSP00000339659/1-771 VAALQNNFFI TNLMDVLQRT PGSNAEESSI LETVTAVAAG KPLSCPNHDG bmy_18174T0/1-704 VAALQNNFFI TNLMDVLQRT PGSNAEESSI LETVTAVAAG KPLSCPNHDG BACU013580/1-761 VAALQNNFFI TNLMDVLQRT PGSNAEESSI LETVTAVAAG KPLSCPNHDG 151 200 ENSTTRP00000005368/1-744 NVMDFYCQSC ETAMCRECTE GEHAEHPTVP LKDVVEQHKA SLQVQLDAVN ENSBTAP00000011609/1-744 NVMDFYCQSC ETAMCRECTE GEHAEHPTVP LKDVVEQHKA SLQVQLDAAN ENSP00000339659/1-771 NVMEFYCQSC ETAMCRECTE GEHAEHPTVP LKDVVEQHKA SLQVQLDAVN bmy_18174T0/1-704 N-------SC ETAMCRECTE GEHAEHPTVP LKDVVEQHKA SLQVQLDAVN BACU013580/1-761 NVMDFYCQSC ETAMCRECTE GEHAEHPTVP LKDVVEQHKA SLQVQLDAVN 201 250 ENSTTRP00000005368/1-744 KRLPEIDSAL QFISEIIHQL TDQKASIVDD IHSTFDELQK TLNVRKSVLL ENSBTAP00000011609/1-744 RRLPEIDSAL QFISEIIHQL TNQKASIVDD IHSTFDELQK TLNVRKSVLL ENSP00000339659/1-771 KRLPEIDSAL QFISEIIHQL TNQKASIVDD IHSTFDELQK TLNVRKSVLL bmy_18174T0/1-704 KRLPEIDSAL QFISEIIHQL TDQKASIVDD IHSTFDELQK TLNVRKSVLL BACU013580/1-761 KRLPEIDSAL QFISEIIHQL TDQKASIVDD IHSTFDELQK TLNVRKSVLL 251 300 ENSTTRP00000005368/1-744 MELEVNYGLK HKVLQSQLDT LLEGQESIKS CSSFTAQALN HGTETEVLLV ENSBTAP00000011609/1-744 MELEVNYGLK HKVLQSQLDT LLEGQESIKS CSNFTAQALN HGTETEVLLV ENSP00000339659/1-771 MELEVNYGLK HKVLQSQLDT LLQGQESIKS CSNFTAQALN HGTETEVLLV bmy_18174T0/1-704 MELEVNYGLK HKVLQSQLDT LLEGQESIKS CSSFTAQALN HGTETEVLLV BACU013580/1-761 MELEVNYGLK HKVLQSQLDT LLEGQESIKS CSSFTAQALN HGTETEVLLV 301 350 ENSTTRP00000005368/1-744 KKQMSEKLNE LADQDFPLHP RENDQLDFIV ETEGLKKSIH NLGTILTTNA ENSBTAP00000011609/1-744 KKQMSEKLNE LADQDFPLHP RENDQLDFIV ETEGLKKSIH NLGTILTTNA ENSP00000339659/1-771 KKQMSEKLNE LADQDFPLHP RENDQLDFIV ETEGLKKSIH NLGTILTTNA bmy_18174T0/1-704 KKQMSEKLNE LADQDFPLHP RENDQLDFIV ETEGLKKSIH NLGTILTTNA BACU013580/1-761 KKQMSEKLNE LADQDFPLHP RENDQLDFIV ETEGLKKSIH NLGTILTTNA 351 400 ENSTTRP00000005368/1-744 VASETVATGE GLRQTIIGQP MSVTITTKDK DGELCKTGNA YITAELSTPD ENSBTAP00000011609/1-744 VASETVATGE GLRQTIIGQP MSVTITTKDK DGELCKTGNA YLTAELSTPD ENSP00000339659/1-771 VASETVATGE GLRQTIIGQP MSVTITTKDK DGELCKTGNA YLTAELSTPD bmy_18174T0/1-704 VASETVATGE GLRQTIIGQP MSVTITTKDK DGELCKTGNA YITAELSTPD BACU013580/1-761 VASETVATGE GLRQTIIGQP MSVTITTKDK DGELCKTGNA YITAELSTPD 401 450 ENSTTRP00000005368/1-744 GSVADGEILD NKNGTYEFLY TVQKEGDFTL SLRLYDQHIR GSPFKLKVIR ENSBTAP00000011609/1-744 GSVADGEILD NKNGTYEFLY TVQKEGDFTL SLRLYDQHIR GSPFKLKVIR ENSP00000339659/1-771 GSVADGEILD NKNGTYEFLY TVQKEGDFTL SLRLYDQHIR GSPFKLKVIR bmy_18174T0/1-704 GSVADGEILD NKNGTYEFLY TVQKEGDFTL SLRLYDQHIR GSPFKLKVIR BACU013580/1-761 GSVADGEILD NKNGTYEFLY TVQKEGDFTL SLRLYDQHIR GSPFKLKVIR 451 500 ENSTTRP00000005368/1-744 SADVSPTTEG VKRRVKSPGS GHVKQKAVKR PASMYSTGKR KENPIEDXXX ENSBTAP00000011609/1-744 SADVSPTTEG VKRRVKSPGS GHVKQKAVKR PASMYSTGKR KENPIEDDLI ENSP00000339659/1-771 SADVSPTTEG VKRRVKSPGS GHVKQKAVKR PASMYSTGKR KENPIEDDLI bmy_18174T0/1-704 SADVSPTTEG VKRRVKSPGS GHVKQKAVKR PASMYSTGKR KENPIEDDLI BACU013580/1-761 SADVSPTTEG VKRRVKSPGS GHVKQKAVKR PASMYSTGKR KENPIEDDLI 501 550 ENSTTRP00000005368/1-744 XXXXTKGRNK GEFTNLQGVA ASTNGKILIA DSNNQCVQIF SNDGQFKSRF ENSBTAP00000011609/1-744 FRVGTKGRNK GEFTNLQGVA ASTNGKILIA DSNNQCVQIF SNDGQFKSRF ENSP00000339659/1-771 FRVGTKGRNK GEFTNLQGVA ASTNGKILIA DSNNQCVQIF SNDGQFKSRF bmy_18174T0/1-704 FRVGTKGRNK GEFTNLQGVA ASTNGKILIA DSNNQCVQIF SNDGQFKSRF BACU013580/1-761 FRVGTKGRNK GEFTNLQGVA ASTNGKILIA DSNNQCVQIF SNDGQFKSRF 551 600 ENSTTRP00000005368/1-744 GIRGRSPGQL QRPTGVAVHP SGDIIIADYD NKWVSIFSSD GKFKTKIGSG ENSBTAP00000011609/1-744 GIRGRSPGQL QRPTGVAVHP SGDIIIADYD NKWVSIFSSD GKFKTKIGSG ENSP00000339659/1-771 GIRGRSPGQL QRPTGVAVHP SGDIIIADYD NKWVSIFSSD GKFKTKIGSG bmy_18174T0/1-704 GIRGRSPGQL QRPTGVAVHP SGDIIIADYD NKWVSIFSSD GKFKTKIGSG BACU013580/1-761 GIRGRSPGQL QRPTGVALHP SGDIIIADYD NKWVSIFSSD GKFKTKIGSG 601 650 ENSTTRP00000005368/1-744 KLMGPKGVSV DRNGHIIVVD NKACCVFIFQ PNGKIVTRFG SRGNGDRQFA ENSBTAP00000011609/1-744 KLMGPKGVSV DRNGHIIVVD NKACCVFIFQ PNGKIVTRFG SRGNGDRQFA ENSP00000339659/1-771 KLMGPKGVSV DRNGHIIVVD NKACCVFIFQ PNGKIVTRFG SRGNGDRQFA bmy_18174T0/1-704 KLMGPKGVSV DRNGHIIVVD NKACCVFIFQ PNGKIVTRFG SRGNGDRQFA BACU013580/1-761 KLMGPKGVSV DRNGHIIVVD NKACCVFIFQ PNGKIVTRFG SRGNGDRQFA 651 700 ENSTTRP00000005368/1-744 ----GPHFAA VNSNNEIIVT DFHNHSVKVF NQEGEFMLKF GSNGEGNGQF ENSBTAP00000011609/1-744 ----GPHFAA VNSNNEIIVT DFHNHSVKVF NQEGEFMLKF GSNGEGNGQF ENSP00000339659/1-771 ----GPHFAA VNSNNEIIIT DFHNHSVKVF NQEGEFMLKF GSNGEGNGQF bmy_18174T0/1-704 GTLDGPHFAA VNSNNEIIVT DFHNHSVKVF NQEGEFMLKF GSNGEGNGQF BACU013580/1-761 ----GPHFAA VNSNNEIIVT DFHNHSVKVF NQEGEFMLKF GSNGEGNGQF 701 750 ENSTTRP00000005368/1-744 NAPTGVAVDS NGNIIVADWG NSRIQVFDGS GSFLSYINTS ADPLYGPQGL ENSBTAP00000011609/1-744 NAPTGVAVDS NGNIIVADWG NSRIQVFDGS GSFLSYINTS ADPLYGPQGL ENSP00000339659/1-771 NAPTGVAVDS NGNIIVADWG NSRIQVFDGS GSFLSYINTS ADPLYGPQGL bmy_18174T0/1-704 NAPTGVAVDS NGNIIVADWG NSRIQVFDGS GSFLSYINTS ADPLYGPQGL BACU013580/1-761 NAPTGVAVDS NGNIIVADWG NSRIQVFDGS GSFLSYINTS ADPLYGPQGL 751 800 ENSTTRP00000005368/1-744 ALTSDGHVVV ADSGNHCFKV YRYLQ ENSBTAP00000011609/1-744 ALTSDGHVVV ADSGNHCFKV YRYLQ ENSP00000339659/1-771 ALTSDGHVVV ADSGNHCFKV YRYLQ bmy_18174T0/1-704 ALTSDGHVVV ADSGNHCFKV YRYLQ BACU013580/1-761 ALTSDGHVVV ADSGNHCFKV YRYLQ