KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:08 2014 Check: 00 .. Name: ENSP00000260723/1-506 Len: 526 Check: 3571 Weight: 1.00 Name: ENSBTAP00000011611/1-499 Len: 526 Check: 368 Weight: 1.00 Name: bmy_07045T0/1-473 Len: 526 Check: 3848 Weight: 1.00 Name: BACU018984/1-502 Len: 526 Check: 5665 Weight: 1.00 Name: ENSTTRP00000004875/1-500 Len: 526 Check: 9288 Weight: 1.00 // 1 50 ENSP00000260723/1-506 MIMSNTHKAR LERRVTGSTN RWRLPKQPFS GDLLSLSQMC KALSIDFEEA ENSBTAP00000011611/1-499 MKMLNPQKPR LERRIAGSTN RWRFPRQPFS GDLLGLSQMC KAANIDFDEV bmy_07045T0/1-473 ---------- --MRISGITG K-------QH GK-------C ---------- BACU018984/1-502 -----QHKPQ LERRIVGSTN RWRFPRKPFV GDLLALSQMC KAVNIDFDEV ENSTTRP00000004875/1-500 -----QHKPQ LERRIVGSTS RWRFLREPFL GDLLALSQMC KAVNVDFDEV 51 100 ENSP00000260723/1-506 LRNPDRLCIS QIQKFFFENF KNKDIQSGEA DVILECLGFK WELHQPQLFQ ENSBTAP00000011611/1-499 LKNPDRLCIS QIQKIFPENL KNKTIQSREA DVILECLGFK WELHQPQLFQ bmy_07045T0/1-473 --DSGWLCIS QIQKNFTENL KNKAIQSGEA GVILECLGFR WELHQPQLFQ BACU018984/1-502 LKNPDRLCIS QIQKNFPENL KNKAIQSGEA GVILECLGFR WELHQPQLFQ ENSTTRP00000004875/1-500 LKNPDRLCIS QIQENFPETL KNKAIQSAEA GVILECLGFR WELHQPQLFQ 101 150 ENSP00000260723/1-506 SETLAKLYLK ALAQGTTHPL RELEELLRAQ SPKKTKEKSP AKRIIISLKI ENSBTAP00000011611/1-499 SETLAKLYLM GLARGNANPE KESVKILQAQ QPGRSREQRP V-------KI bmy_07045T0/1-473 SETLTKLYMI ALARANANPE KELETLLPAQ LPGKMKEQRP VKKMIVSLKI BACU018984/1-502 SGTLTKLYMM ALARGNANPE KELEKLLPAQ LPGKMKEQRP VKKMIVSLKI ENSTTRP00000004875/1-500 SETLTKLYMM ALARGNANPE KELEKLLQAQ LPGKIKEQRP VKKMIVSLKI 151 200 ENSP00000260723/1-506 NDPLVTKVAF ATALKNLYMS EVEINLEDLL GVLASAHILQ FSGLFQRCVD ENSBTAP00000011611/1-499 NDPLVTREAF ATALKNLYMQ EVKICLDDVL GVLAAAHILQ FGSLFQRCVT bmy_07045T0/1-473 NDPLVTEAAF AVALKNLYLR EVKVSVDDVL GVLAAAHILQ FRSLFQRCVT BACU018984/1-502 NDPLVTEAAF AVALKNLYLR EVKVSVDDVL GVLAAAHILQ FRSLFQRCVT ENSTTRP00000004875/1-500 NDPLVTEAAF AVALQNLYLR EVRVSMDDVL GVLAAAHVLQ FNSLFQRCVT 201 250 ENSP00000260723/1-506 VMIARLKPST IKKFYEAGCK YKEEQLTTGC EKWLEMNLVP LGGTQIHLHK ENSBTAP00000011611/1-499 VMMSGLTPST IKNFYLAGCK YKEEPLTTAC EKWMEMNLVP LVGTQIHLRK bmy_07045T0/1-473 TMMNGLTPST IKNFYLAGCK YKEEPLTTAC EKWMEMNLVP LVGTQIHLRK BACU018984/1-502 TMMNGLTPST IKNFYLAGCK YKEETLTTAC EKWMEMNLVP LMGTQIHLRK ENSTTRP00000004875/1-500 MMMNGLTPST IKDFYLAGCK YKEEPLTTAC EKWMEINLVP LVGTQIHLRK 251 300 ENSP00000260723/1-506 IPQDLLHKVL KSPRLFTFSE FHLLKTMLLW VFLQLNYKIQ AIPTYETVMT ENSBTAP00000011611/1-499 IPKELLHKVL KSPRLFTFSE FDLLKTLLLW VYLQLNNKTQ TFPMYQTVLM bmy_07045T0/1-473 IPQELLHKVL RSPRLFTFSE FHLLKTLLLW VYLQLNNKAQ TIPMYETVLS BACU018984/1-502 IPQELLHKVL RSPRLFTFSE FHLLKTLLLW VYLQLNSKAQ TIPMYETVLS ENSTTRP00000004875/1-500 IPQELLHKVL RSPRLFTFSE FRLLKTLLLW VYLQLNSKTQ TMPTYETVLS 301 350 ENSP00000260723/1-506 FFK------- ---------- -SFPENCCFL DRDIGRSLRP LFLCLRLHGI ENSBTAP00000011611/1-499 FFS------- ---------- -SFPKNCAFL DRDVGQNLIP LFLCLRLHSI bmy_07045T0/1-473 FFSSSRKECS EGLLFLFAPL LSFPKKCSFL DRDVGQNWMP LFLCLRLHGI BACU018984/1-502 FFS------- ---------- -SFPKKCCFL DRDVGQNSL- MNKSIRMFPL ENSTTRP00000004875/1-500 FFS------- ---------- -SFPKKCCFL DRDVGLNWMQ LFLCLRLHGI 351 400 ENSP00000260723/1-506 T--KGKDLEV LRHLNFFPES WLDQVTVNHY HALENGGDMV HLKDLNTQAV ENSBTAP00000011611/1-499 T--KGKDLEE LRHINFFPES WLVRVTANHY HALENGGDMA HVKDLSTQAV bmy_07045T0/1-473 T--KGKDLEE LRHINFFPES WLVRVIANHY HALENGGDMA HVKDLTTQGV BACU018984/1-502 CFFPGKDLEE LRHINFFPES WLVRVIANHY HALENGGDMA HVKDLTTQGV ENSTTRP00000004875/1-500 T--KGKDLEE LRHINFFPES WLVRVIANHY LALENGGDMA HAKDLTTQGV 401 450 ENSP00000260723/1-506 RFGLLFNQEN TTYSKTIALY GFFFKIKGLK HDTTSYSFYM QRIKHTDLES ENSBTAP00000011611/1-499 RFGLLFNQEY TTHSKVITLY GFFFEIKGIK HDTTSYSFHM QRIRHTDLEC bmy_07045T0/1-473 RFGLLFNQEY TTHSKVIAIY GFFFEIKGIK HDTTSYSFHM QRIRHTDLEF BACU018984/1-502 RFGLLFNQEY TTHSKVIAIY GFFFEIKGIK HDTTSYSFHM QRIRHTDLEF ENSTTRP00000004875/1-500 RFGLLFNQEY TTHSKVIAMY GFFFEIKGIK HDTTSYSFHM QRIRHTNLEF 451 500 ENSP00000260723/1-506 PSAVYEHNHV SLRAARLVKY EIRAEALVDG KWQEFRTNQI KQKFGLTTSS ENSBTAP00000011611/1-499 ASTVYENTPI SLRAERLVTY EIRAQTTVDG KWQEFRTNQI TQKFGLAEPS bmy_07045T0/1-473 ASSVYEHSPI SLRAERLVTY EIRAQTLVDG KWREFTTNQI KQKFGLVKSS BACU018984/1-502 ASSVCEHSPI SLRAERLVTY EIRAQTLVDG KWQEFTTNQI KQKFGLVKSS ENSTTRP00000004875/1-500 ASSVYEHSPI SLRAERLVTY EIRAQTLVDG KWQEFTTNQI KQK-GLVKSS 501 550 ENSP00000260723/1-506 CKSHTLKIQT VGIPIYVSFA FIFPAS ENSBTAP00000011611/1-499 CKSHALKIQT VGIPIYASFS FVFSLS bmy_07045T0/1-473 CKSH------ --VSAYLFFS L----- BACU018984/1-502 CKSHALKIQT VGIPIYASFS FVFSLS ENSTTRP00000004875/1-500 CKSHALKIQT VGIPIYASFS FIFSLS