KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:14 2014 Check: 00 .. Name: ENSP00000365081/1-188 Len: 251 Check: 1597 Weight: 1.00 Name: ENSBTAP00000011633/1-188 Len: 251 Check: 1388 Weight: 1.00 Name: bmy_03150T0/1-251 Len: 251 Check: 5925 Weight: 1.00 Name: BACU015897/1-188 Len: 251 Check: 754 Weight: 1.00 Name: ENSTTRP00000013371/1-188 Len: 251 Check: 887 Weight: 1.00 // 1 50 ENSP00000365081/1-188 ---------- ---------- ---------- --MFHQIWAA LLYFYGIILN ENSBTAP00000011633/1-188 ---------- ---------- ---------- --MFHHIWAA LLYLCGILLN bmy_03150T0/1-251 GGWKQSGLSS QWGRAVKAPA TPRRPPAPSC LKMFHQIWAA LLYLYGILLN BACU015897/1-188 ---------- ---------- ---------- --MFHQIWAA LLYLYGILLN ENSTTRP00000013371/1-188 ---------- ---------- ---------- --MFHQIWAA LLYLYGILLN 51 100 ENSP00000365081/1-188 SIYQCPEHSQ LTTLGVDGKE FPEVHLGQWY FIAGAAPTKE ELATFDPVDN ENSBTAP00000011633/1-188 SIYQCPEHSQ LTTEGVDGKE FPEPHLGQWY FIAGAAPTKE ELATFDPVDN bmy_03150T0/1-251 SIYQCPEHSQ LTTEGVDGKE FPEPHLGRWY FIAGAAPTKE ELATFDPVDN BACU015897/1-188 SIYQCPEHSQ LTTEGADGKE FPEPHLGRWY FIAGAAPTKE ELATFDPVDN ENSTTRP00000013371/1-188 SIYQCPEHSQ LTTEGLDGKE FPEPHLGRWY FIAGAAPTKE ELATFDPVDN 101 150 ENSP00000365081/1-188 IVFNMAAGSA PMQLHLRATI RMKDGLCVPR KWIYHLTEGS TDLRTE---- ENSBTAP00000011633/1-188 IVFNMAVGSA PMQLQLRATI RTKNGLCVPR KWIYHLSDGS TDLRTE---- bmy_03150T0/1-251 IVFNMAVGSA PMQLQLRATI RMKNGLCAPR KWIYHLSEGS TDLRTEGWFS BACU015897/1-188 IVFNMAVGSA PMQLQLRATI RTKNGLCAPR KWIYHLSEGS TDLRTE---- ENSTTRP00000013371/1-188 IVFNMAVGSA PMQLQLRATI RTKNGLCAPR KWIYHLSEGS TDLRTE---- 151 200 ENSP00000365081/1-188 ---------- ---------- -------GRP DMKTELFSSS CPGGIMLNET ENSBTAP00000011633/1-188 ---------- ---------- -------GRP DMKTKLFSSA CPGGIMLKET bmy_03150T0/1-251 PALTLLKPPG LACFCTSVLT LSPPTLTGRP DMKTKLFSSA CPGGIMLKET BACU015897/1-188 ---------- ---------- -------GRP DMKTKLFSSA CPGGIMLKET ENSTTRP00000013371/1-188 ---------- ---------- -------GRP DMKTKLFSSA CPGGIMLKET 201 250 ENSP00000365081/1-188 GQGYQRFLLY NRSPHPPEKC VEEFKSLTSC LDSKAFLLTP RNQEACELSN ENSBTAP00000011633/1-188 GQGYQRFLLY NRSPHPPEKC VEEFQSLTSC LDFKAFLLTP RNQDACELSS bmy_03150T0/1-251 GQGYQRFLLY NRSPHPPEKC VEEFQSLTSC LDFKAFLLTP RNQETCELSS BACU015897/1-188 GQGYQRFLLY NRSPHPPKKC VEEFQSLTSC LDFKAFLLTP RNQETCELSS ENSTTRP00000013371/1-188 GQGYQRFLLY NRSPHPPEKC VEEFQSLTSC LDFKAFLLTP RNQETCELSS 251 300 ENSP00000365081/1-188 N ENSBTAP00000011633/1-188 N bmy_03150T0/1-251 N BACU015897/1-188 N ENSTTRP00000013371/1-188 N