KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:16 2014 Check: 00 .. Name: bmy_02184T0/1-338 Len: 670 Check: 2093 Weight: 1.00 Name: ENSBTAP00000011643/1-658 Len: 670 Check: 3064 Weight: 1.00 Name: ENSP00000344488/1-661 Len: 670 Check: 3675 Weight: 1.00 Name: BACU011157/1-659 Len: 670 Check: 9829 Weight: 1.00 Name: ENSTTRP00000003882/1-633 Len: 670 Check: 9115 Weight: 1.00 // 1 50 bmy_02184T0/1-338 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011643/1-658 MTGGRFDFDD GGTYCGGWEE GKAHGHGICT GPKGQGEYSG SWSHGFEVVG ENSP00000344488/1-661 MTGGRFDFDD GGTYCGGWEE GKAHGHGICT GPKGQGEYSG SWSHGFEVVG BACU011157/1-659 MTGGRFDFDD GGTYWGGWEE GKAHGHGICT GPKGQGEYSG SWSHGFEVVG ENSTTRP00000003882/1-633 MTGGRFDFDD GGTYCGGWEE GKAHGHGICT GPKGQGEYSG SWSHGFEVVG 51 100 bmy_02184T0/1-338 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011643/1-658 GYTWPSGNTY QGYWAQGKRH GLGVETKGKW MYRGEWSHGF KGRYGVRQSL ENSP00000344488/1-661 GYTWPSGNTY QGYWAQGKRH GLGVETKGKW MYRGEWSHGF KGRYGVRQSL BACU011157/1-659 GYTWPSGNTY QGYWAQGKRH GLGVETKGKW MYRGEWSHGF KGRYGVRQSL ENSTTRP00000003882/1-633 GYTWPSGNTY QGYWAQGKRH GLGVETKGKW MYRGEWSHGF KGRYGVRQSL 101 150 bmy_02184T0/1-338 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011643/1-658 CTPARYEGTW SNGLQDGYGV ETYGDGGTYQ GQWAGGMRHG YGVRQSVPYG ENSP00000344488/1-661 CTPARYEGTW SNGLQDGYGV ETYGDGGTYQ GQWAGGMRHG YGVRQSVPYG BACU011157/1-659 CTPARYEGTW SNGLQDGYGV ETYGDGGTYQ GQWAGGMRHG YGVRQSVPYG ENSTTRP00000003882/1-633 CTPARYEGTW SNGLQDGYGV ETYGDGGTYQ GQWAGGMRHG YGVRQSVPYG 151 200 bmy_02184T0/1-338 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011643/1-658 MATVIRSPLR TSLASLRSEQ SNGSVLHDAA AAADSPAGTR GGFVLNFHAD ENSP00000344488/1-661 MATVIRSPLR TSLASLRSEQ SNGSVLHDAA AAADSPAGTR GGFVLNFHAD BACU011157/1-659 MATVIRSPLR TSLASLRSEQ SNGSVLHDAA AAADSPAGSR GGFVLNFHAD ENSTTRP00000003882/1-633 MATVIRSPLR TSLASLRSEQ SNGSVLHDAA AAADSPAGSR GGFVLNFHAD 201 250 bmy_02184T0/1-338 ---------- ---------- ---MLSEDRT RLAASK---- ---------- ENSBTAP00000011643/1-658 AELSGKKKGG LFRRGSLLGS MKLRKSESKS SISSKRSSVR SDAAMSRISS ENSP00000344488/1-661 AELAGKKKGG LFRRGSLLGS MKLRKSESKS SISSKRSSVR SDAAMSRISS BACU011157/1-659 AELAGKKKGG LFRRGSLLGS MKLRKSESKS SISSKRSSVR SDAAMSRISS ENSTTRP00000003882/1-633 AELAGKKKGG LFRRGSLLGS MKLRKSESKS SISSKRSSVR SDAAMSRISS 251 300 bmy_02184T0/1-338 -DVKTTRVFG VI-------- -----SSPSQ FTSRSSPDLK PSVRISS--- ENSBTAP00000011643/1-658 SDANSTISFG DVDCDFCPVE DHVDATTTEI YMGEWKNDKR TGFGISERSN ENSP00000344488/1-661 SDANSTISFG DVDCDFCPVE DHVDATTTET YMGEWKNDKR NGFGVSERSN BACU011157/1-659 SDANSTISFG DVDCDFCPVE DHVDATTTET YMGEWKNDKR TGFGISERSN ENSTTRP00000003882/1-633 SDANSTISFG DVDCDFCPVE DHVDATTTET YMGEWKNDKR TGFGISERSN 301 350 bmy_02184T0/1-338 ---------- ---HRY---- ---------- ---------- ---------- ENSBTAP00000011643/1-658 GMKYEGEWAN NKRHGYGCTV FPDGSKEEGK YKNNILVRGI RKQLIPIRNT ENSP00000344488/1-661 GMKYEGEWAN NKRHGYGCTV FPDGSKEEGK YKNNILVRGI RKQLIPIRHT BACU011157/1-659 GMKYEGEWAN NKRHGYGCTV FPDGSKEEGK YKNNILVRGI RKQLIPIRNT ENSTTRP00000003882/1-633 GMKYEGEWAN NKRHGYGCTV FPDGSKEEGK YKNNILVRGI RKQLIPIRNT 351 400 bmy_02184T0/1-338 ---------- ---------- ---------K TAHARAKADA ADQAALAARQ ENSBTAP00000011643/1-658 KTREKVDRAI EGAQRAAAMA RTKVEIANSR TAHARAKADA ADQAALAARQ ENSP00000344488/1-661 KTREKVDRAI EGAQRAAAMA RTKVEIANSR TAHARAKADA ADQAALAARQ BACU011157/1-659 KTREKVDRAI EGAQRAAAMA RTKVEIANSR TAHARAKADA ADQAALAARQ ENSTTRP00000003882/1-633 KTREKVDRAI EGAQRAAAMA RTKVEIANSR TAHARAKADA ADQAALAARQ 401 450 bmy_02184T0/1-338 ECDIARAVAR ELSPDFYQPG PDYVKQRFQE GVDAKENPEE KVPEKPPTPK ENSBTAP00000011643/1-658 ECDIARAVAR ELSPDFYQPG PDYIKQRFQE GVDAKENPED KVPEKPPTPK ENSP00000344488/1-661 ECDIARAVAR ELSPDFYQPG PDYVKQRFQE GVDAKENPEE KVPEKPPTPK BACU011157/1-659 ECDIARAVAR ELSPDFYQPG PDYVKQRFQE GVDAKENPEE KVPEKPPTPK ENSTTRP00000003882/1-633 ECDIARAVAR ELSPDFYQPG PDYVKQRFQE GVDAKENPEE KVPEKPPTPK 451 500 bmy_02184T0/1-338 ESPHFYRKGT TPPGSPEASP KQGGSP--SP EPVKKQNPSS GARLNQDKRS ENSBTAP00000011643/1-658 ESPHFYRKGT TPPESPEPSP RQGRSP--SP KPARKQNPSS GARFNQDRRS ENSP00000344488/1-661 ESPHFYRKGT TPPRSPEASP KHSHSPASSP KPLKKQNPSS GARLNQDKRS BACU011157/1-659 ESPHFYRKGT TPPGSPEASP KQGGSP--SP EPVKKQNPSS GARLNQDKRS ENSTTRP00000003882/1-633 ESPHFYRKGT TPPASPEASP KQGGSP--SP KPVKKQNPSS GARLNQDKRS 501 550 bmy_02184T0/1-338 AAKEQVTATV NKPLTSKAPT KEVGAAVPHS RYSGRHHVPN PSNGELHSQY ENSBTAP00000011643/1-658 AAEEKVTAAV NKPLTSKAPP KEVGAVVPSS KYSGRHHIPN PSNGELHSQY ENSP00000344488/1-661 VADEQVTAIV NKPLMSKAPT KEAGAVVPQS KYSGRHHIPN PSNGELHSQY BACU011157/1-659 AAKEQVTATV NKPLTSKAPT KEVGAAVPHS RYSGRHHVPN PSNGELHTQY ENSTTRP00000003882/1-633 AAEEQVTATV NKPLTSKAPT KEVGAAVPHS RYSGRHHVPN PSNGELHSQY 551 600 bmy_02184T0/1-338 HGYYVKLNAP QYPPEDVEEE AGPSQSSSAL VHKPSPNKWS PPKSVTKPVA ENSBTAP00000011643/1-658 HGYYVKLNAP QHPPEDTEEE -GSSQSSSAL VHKPSPNKWS PPKSVTKPVA ENSP00000344488/1-661 HGYYVKLNAP QHPPVDVEDG DGSSQSSSAL VHKPSANKWS PSKSVTKPVA BACU011157/1-659 HGYYVKLNAP QYPPEDVEEE EGPSQSSSAL VHKPSPNKWS PPKSVTKPVA ENSTTRP00000003882/1-633 HGYYVKLNAP QYPPEDVEEE EGPSQSSSAL VHKPSPNRWS PPKSVTKPVA 601 650 bmy_02184T0/1-338 KESKAEPKAK KSELAIPKNP ASSDSCPSVA KEANSSSLFV LQISPSRSNC ENSBTAP00000011643/1-658 KESKAEPKAK KSELAIPKNP ASSDARPALE KEANSGPNSI MIILVMLLNI ENSP00000344488/1-661 KESKAEPKAK KSELAIPKNP ASNDSCPALE KEANSGPNSI MIVLVMLLNI BACU011157/1-659 KESKAEPKAK KSELAIPKNP ASSDSCPSVE KEANSGPNSI MIVLVMLLNI ENSTTRP00000003882/1-633 KESKAEPKAK KSELAIPKNP ASNDSCPALE KEANS----- ---------- 651 700 bmy_02184T0/1-338 LYEEMILPYP TTYTLTKMRI ENSBTAP00000011643/1-658 GLAILFVHFL T--------- ENSP00000344488/1-661 GLAILFVHFL T--------- BACU011157/1-659 GLAILFVHFL T--------- ENSTTRP00000003882/1-633 ---------- ----------