KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:17 2014 Check: 00 .. Name: ENSBTAP00000011645/1-919 Len: 919 Check: 9100 Weight: 1.00 Name: ENSP00000220562/1-919 Len: 919 Check: 46 Weight: 1.00 Name: ENSTTRP00000008556/1-918 Len: 919 Check: 8237 Weight: 1.00 Name: bmy_05835T0/1-720 Len: 919 Check: 8769 Weight: 1.00 Name: BACU015268/1-720 Len: 919 Check: 8221 Weight: 1.00 // 1 50 ENSBTAP00000011645/1-919 MTGYTMLRNG GAGNGGQTCM LRWSNRIRLT WLSFTLFIIL VFFPLIAHYY ENSP00000220562/1-919 MTGYTMLRNG GAGNGGQTCM LRWSNRIRLT WLSFTLFVIL VFFPLIAHYY ENSTTRP00000008556/1-918 MTGYTMLRNG GVGNGGQTCV LRLSNRIRLT WLSFTLFIIL VFFPLIAHYY bmy_05835T0/1-720 MTGYTMLRNG GVGNGGQTCM LRWSNRIRLT WLSFTLFVIL VFFPLIAHYY BACU015268/1-720 MTGYTMLRNG GVGNGGQTCM LRWSNRIRLT WLSFTLFVIL VFFPLIAHYY 51 100 ENSBTAP00000011645/1-919 LTTLDEADEA GKRIFGPRAG SELCEVKHVL DLCRIRESVS EELLQLEAKR ENSP00000220562/1-919 LTTLDEADEA GKRIFGPRVG NELCEVKHVL DLCRIRESVS EELLQLEAKR ENSTTRP00000008556/1-918 LTTLDEADEA GKRIFGPRAG NELCEVKHVL DLCRIRESVS EELLQLEAKR bmy_05835T0/1-720 LTTLDEADEA GKRIFGPRAG NELCEVKHVL DLCRIRESVS EELLQLEAKR BACU015268/1-720 LTTLDEADEA GKRIFGPRAG NELCEVKHVL DLCRIRESVS EELLQLEAKR 101 150 ENSBTAP00000011645/1-919 QELNSEIAKL NLKIEACKKS IENAKQDLLQ LKNVISQTEH SYKELMAQNQ ENSP00000220562/1-919 QELNSEIAKL NLKIEACKKS IENAKQDLLQ LKNVISQTEH SYKELMAQNQ ENSTTRP00000008556/1-918 QELNSEIAKL NLKIEACKKS IENAKQDLLQ LKNVISQTEH SYKELMAQNQ bmy_05835T0/1-720 QELNSEIAKL NLKIEACKKS IENAKQDLLQ LKNVISQTEH SYKELMAQNQ BACU015268/1-720 QELNSEIAKL NLKIEACKKS IENAKQDLLQ LKNVISQTEH SYKELMAQNQ 151 200 ENSBTAP00000011645/1-919 PKLSLPIRLL PEKDDAGLPP PKAQRGCRLH NCFDYSRCPL TSGFPVYVYD ENSP00000220562/1-919 PKLSLPIRLL PEKDDAGLPP PKATRGCRLH NCFDYSRCPL TSGFPVYVYD ENSTTRP00000008556/1-918 PKLSLPIRLL PEKDDIGLPP PKVLRSCRLH NCFDYSRCPL TSGFPVYVYD bmy_05835T0/1-720 PKLSLPIRLL PEKDDIGLPP PKVLRSCRLH NCFDYSRCPL TSGFPVYVYD BACU015268/1-720 PKLSLPIRLL PEKDDIGLPP PKVLRSCRLH SCFDYSRCPL TSGFPVYVYD 201 250 ENSBTAP00000011645/1-919 SDQFAFGSYL DPLVKQAFQA TARANVYVTD NADIACLYVI LVGEMQEPAV ENSP00000220562/1-919 SDQFVFGSYL DPLVKQAFQA TARANVYVTE NADIACLYVI LVGEMQEPVV ENSTTRP00000008556/1-918 SDQFAFGSHL DPLVKQAFQA TARANVYVTE NADIACLYVI LVGEMQELGV bmy_05835T0/1-720 SDQFAFGSYL DPLVKQAFQA TARANVYVTE NADIACLYVI LVGEMQELGV BACU015268/1-720 SDQFAFGSYL DPLVKQAFQA TARANVYVTE NADIACLYVI LVGEMQELGV 251 300 ENSBTAP00000011645/1-919 LRPADLEKQL LSLPHWRTDG HNHVIISLSR KSDTQNLLYN VSTGRAMVAQ ENSP00000220562/1-919 LRPAELEKQL YSLPHWRTDG HNHVIINLSR KSDTQNLLYN VSTGRAMVAQ ENSTTRP00000008556/1-918 LRPADLEKQL YSLPHWRTDG HNHVIINLSR KSDTQNLLYN VSTGRAMVAQ bmy_05835T0/1-720 LRPADLEKQL YSLPHWRTDG HNHVIISLSR KSDTQNLLYN VSTGRAMVAQ BACU015268/1-720 LRPADLEKQL YSLPHWRTDG HNHVIISLSR KSDTQNLLYN VSTGRAMVAQ 301 350 ENSBTAP00000011645/1-919 STFYAAQYRP GFDLVVSPLV HAMSEPNFME IPPQVPVKRK YLFTFQGEKI ENSP00000220562/1-919 STFYTVQYRP GFDLVVSPLV HAMSEPNFME IPPQVPVKRK YLFTFQGEKI ENSTTRP00000008556/1-918 STFYAAQYRP GFDLVVSPLV HAMSEPNFME IPPQVPVKRK YLFTFQGEKI bmy_05835T0/1-720 STFYAAQYRP GFDLVVSPLV HAMSEPNFME IPPQVPVKRK YLFTFQGEKI BACU015268/1-720 STFYAAQYRP GFDLVVSPLV HAMSEPNFME IPPQVPVKRK YLFTFQGEKI 351 400 ENSBTAP00000011645/1-919 ESLRSSLQEA RSFEEEMEGD PPADYDDRII ATLKAVQDSK LDQVLVEFTC ENSP00000220562/1-919 ESLRSSLQEA RSFEEEMEGD PPADYDDRII ATLKAVQDSK LDQVLVEFTC ENSTTRP00000008556/1-918 ESLRSSLQEA RSFEEEMEGD PPADYDDRII ATLKAVQDSK LDQVLVEFTC bmy_05835T0/1-720 ESLRSSLQEA RSFEEEMEGD PPADYDDRII ATLKAVQDSK LDQVLVEFTC BACU015268/1-720 ESLRSSLQEA RSFEEEMEGD PPADYDDRII ATLKAVQDSK LDQVLVEFTC 401 450 ENSBTAP00000011645/1-919 KSQPRASLPT EWALCGERED RLELLKLSTF ALIITPGDPR LLVSSGCATR ENSP00000220562/1-919 KNQPKPSLPT EWALCGERED RLELLKLSTF ALIITPGDPR LVISSGCATR ENSTTRP00000008556/1-918 KNQPKPSLPT EWALCGERED RLELLKLSTF ALIITPGDPR LVISSGCATR bmy_05835T0/1-720 KNHPKPSLPT EWALCGERED RLELLKLSTF ALIITPGDPR LVISSGCATR BACU015268/1-720 KNQPKPSLPT EWALCGERED RLELLKLSTF ALIITPGDPR LVISSGCATR 451 500 ENSBTAP00000011645/1-919 LFEALEVGAV PVVLGEHVQL PYQDVLQWSE AALVVPKPRV TEVHFLLRSL ENSP00000220562/1-919 LFEALEVGAV PVVLGEQVQL PYQDMLQWNE AALVVPKPRV TEVHFLLRSL ENSTTRP00000008556/1-918 LFEALEVGAV PVVLGEHVQL PYQDVLQWSE AALVVPKPRV TEVHFLLRSL bmy_05835T0/1-720 LFEALEVGAV PVVLGEHVQL PYQDVLQWSE AALVVPKPRV TEVHFLLRSL BACU015268/1-720 LFEALEVGAV PVVLGEHVQL PYRDVLQWSE AALVVPKPRV TEVHFLLRSL 501 550 ENSBTAP00000011645/1-919 SDSDLLAMRR QGRFLWETYF STTDSIFSTV LAVIRTRIQI PAAPIREEAA ENSP00000220562/1-919 SDSDLLAMRR QGRFLWETYF STADSIFNTV LAMIRTRIQI PAAPIREEAA ENSTTRP00000008556/1-918 SDSDLLAMRR QGRFLWETYF STADSIFSTV LAVIRTRIQI PAAPIREEAA bmy_05835T0/1-720 SDSDLLAMRR QGRFLWETYF STADSIFSTV LAVIRTRIQI PAAPIREEAV BACU015268/1-720 SDSDLLAMRR QGRFLWETYF STADSIFSTV LAVIRTRIQI PAAPIREEAA 551 600 ENSBTAP00000011645/1-919 AEIPHRSGKA AGTDPNMADT GDLDLGPVET EPPYASPKYL RNFTLTVTDL ENSP00000220562/1-919 AEIPHRSGKA AGTDPNMADN GDLDLGPVET EPPYASPRYL RNFTLTVTDF ENSTTRP00000008556/1-918 AEIPHRSGKA AGTDPNMADN GDLDLGPVET EPPYASPKYL RNFTLTVTDF bmy_05835T0/1-720 AEIPHRSGKA AGTDPNMADN GDLDLGPVET EPPYASPKYL RNFTLTVTDF BACU015268/1-720 AEIPHRSGKA AGTDPNMADN GDLDLGPVET EPPYASPRYL RNFTLTVTDF 601 650 ENSBTAP00000011645/1-919 YRSWNSAPGP FHLFPHTPFD PVLPSEAKFL GSGTGFRPIG GGAGGSGKEF ENSP00000220562/1-919 YRSWNCAPGP FHLFPHTPFD PVLPSEAKFL GSGTGFRPIG GGAGGSGKEF ENSTTRP00000008556/1-918 YRSWNSAPGP FHLFPHTPFD PVLPSEAKFL GSGTGFRPIG GGAGGSGKEF bmy_05835T0/1-720 YRSWNSAPGP FHLFPHTPFD PVLPSEAKFL GSGTGFRPIG GGAGGSGKEF BACU015268/1-720 YRSWNSAPGP FHLFPHTPFD PVLPSEAKFL GSGTGFRPIG GGAGGSGKEF 651 700 ENSBTAP00000011645/1-919 QAALGGNVPR EQFTVVMLTY EREEVLMNSL ERLNGLPYLN KVVVVWNSPK ENSP00000220562/1-919 QAALGGNVPR EQFTVVMLTY EREEVLMNSL ERLNGLPYLN KVVVVWNSPK ENSTTRP00000008556/1-918 QASLGGNVPR EQFTVVMLTY EREEVLMNSL ERLNGLPYLN KVVVVWNSPK bmy_05835T0/1-720 QASLGGNVPR EQFTVVMLTY EREEVLMNSL ERLNGLPYLN KVVVVWNSPK BACU015268/1-720 QASLGGNVPR EQFTVVMLTY EREEVLMNSL ERLNGLPYLN KVVVVWNSPK 701 750 ENSBTAP00000011645/1-919 LPSEDLVWPD IGVPIMVVRT EKNSLNNRFL PWNEIETEAI LSIDDDAHLR ENSP00000220562/1-919 LPSEDLLWPD IGVPIMVVRT EKNSLNNRFL PWNEIETEAI LSIDDDAHLR ENSTTRP00000008556/1-918 LPSEDLLWPD IGVPIMVVRT EKNSLNNRFL PWNEIETEAI LSIDDDAHLR bmy_05835T0/1-720 LPSEDLLWPD IGVPIMVIET ---------- ---------- ---------- BACU015268/1-720 LPSEDLLWPD IGVPIMVIET ---------- ---------- ---------- 751 800 ENSBTAP00000011645/1-919 HDEIMFGFRV WREARDRIVG FPGRYHAWDI PHQSWLYNSN YSCELSMVLT ENSP00000220562/1-919 HDEIMFGFRV WREARDRIVG FPGRYHAWDI PHQSWLYNSN YSCELSMVLT ENSTTRP00000008556/1-918 HDEIMFGFRV WREARDRIVG FPGRYHAWDI PHQSWLYNSN YSCELSMVLT bmy_05835T0/1-720 ---------- ---------- ---------- ---------- ---------- BACU015268/1-720 ---------- ---------- ---------- ---------- ---------- 801 850 ENSBTAP00000011645/1-919 GAAFFHKYYA YLYSYVMPQA IRDMVDEYIN CEDIAMNFLV SHITRKPPIK ENSP00000220562/1-919 GAAFFHKYYA YLYSYVMPQA IRDMVDEYIN CEDIAMNFLV SHITRKPPIK ENSTTRP00000008556/1-918 GAAFFHKYYA YLYSYVMPQA IRDMVDEYIN CEDIAMNFLV SHITRKPPIK bmy_05835T0/1-720 ---------- ---------- ---------- ---------- ---------- BACU015268/1-720 ---------- ---------- ---------- ---------- ---------- 851 900 ENSBTAP00000011645/1-919 VTSRWTFRCP GCPQALSHDD SHFHERHKCI NFFVKVYGYM PLLYTQFRVD ENSP00000220562/1-919 VTSRWTFRCP GCPQALSHDD SHFHERHKCI NFFVKVYGYM PLLYTQFRVD ENSTTRP00000008556/1-918 VTSRWTFRCP GCPQALSHDD SHFHERHKCI NFFVKVYGYM PLLYTQFRVD bmy_05835T0/1-720 ---------- ---------- ---------- ---------- ---------- BACU015268/1-720 ---------- ---------- ---------- ---------- ---------- 901 950 ENSBTAP00000011645/1-919 SVLFKTRLPH DKTKCFKFI ENSP00000220562/1-919 SVLFKTRLPH DKTKCFKFI ENSTTRP00000008556/1-918 SVLFKTRLPH DKTKCFKI- bmy_05835T0/1-720 ---------- --------- BACU015268/1-720 ---------- ---------