KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:44:19 2014 Check: 00 .. Name: ENSBTAP00000011663/1-319 Len: 379 Check: 1812 Weight: 1.00 Name: ENSP00000249041/1-368 Len: 379 Check: 778 Weight: 1.00 Name: bmy_01137T0/1-323 Len: 379 Check: 6472 Weight: 1.00 Name: ENSTTRP00000004532/1-332 Len: 379 Check: 3305 Weight: 1.00 // 1 50 ENSBTAP00000011663/1-319 MADIQNVSLD SPGSMGAVAV PVVFALIFLL GTVGNGLVLA VLLQPGPSAW ENSP00000249041/1-368 MADAQNISLD SPGSVGAVAV PVVFALIFLL GTVGNGLVLA VLLQPGPSAW bmy_01137T0/1-323 MADAQNVSLD SPGSMGAVAV PVVFALIFLL GTVGNGLVLA VLLQPGLSAW ENSTTRP00000004532/1-332 MADAQNVSLD GPGSMGAVAV PVVFALIFLL GTVGNGLVLA VLLQPGLGAW 51 100 ENSBTAP00000011663/1-319 QEPGSTTDLF ILNLAAADLC FILCCVPFQA AIYTLDDWLF GALVCKAVHL ENSP00000249041/1-368 QEPGSTTDLF ILNLAVADLC FILCCVPFQA TIYTLDAWLF GALVCKAVHL bmy_01137T0/1-323 QEPGSTTDLF ILNLAVADLC FILCCVPFQA AIYTLDAWLF GALVCKAVHL ENSTTRP00000004532/1-332 QEPGSTTDLF ILNLAVADLC FILCCVPFQA AIYTLDAWLF GALVCKAVHL 101 150 ENSBTAP00000011663/1-319 LIYLTMYASS FTLAAVSVDR YLAVRHPLRS RALRTPRNAR AAVGLVWLLA ENSP00000249041/1-368 LIYLTMYASS FTLAAVSVDR YLAVRHPLRS RALRTPRNAR AAVGLVWLLA bmy_01137T0/1-323 LIYLTMYASS FTLAAVSVDR YLAVRHPLRS RALRTPRNAR AAVGLVWLLA ENSTTRP00000004532/1-332 LIYLTMYASS FTLAAVSVDR YLAVRHPLRS RALRTPRNAR AAVGLVWLLA 151 200 ENSBTAP00000011663/1-319 ALFSAPYLSY YGTVRYGALE LCVPAWEDAR RRALDVATFA AGYLLPVAVV ENSP00000249041/1-368 ALFSAPYLSY YGTVRYGALE LCVPAWEDAR RRALDVATFA AGYLLPVAVV bmy_01137T0/1-323 ALFSAPYLSY YGTVRYGALE LCVPAWEDAR RRALDVATFA AGYLLPVAVV ENSTTRP00000004532/1-332 ALFSAPYLSY YGTVRYGALE LCVPAWEDAR RRALDVATFA AGYLLPVAVV 201 250 ENSBTAP00000011663/1-319 SLAYGRTLRF LWAAVGPAGA AAAEARRRAT GRAGRVMLAV AALYALCWGP ENSP00000249041/1-368 SLAYGRTLRF LWAAVGPAGA AAAEARRRAT GRAGRAMLAV AALYALCWGP bmy_01137T0/1-323 SLAYGRTLRF F--------- ---------- ---------- ---------- ENSTTRP00000004532/1-332 SLAYGRTLRF LWAAVGPAGA AAAEARRRAT GRAGRAMLAV AALYALCWGP 251 300 ENSBTAP00000011663/1-319 HH-------- ---------- ---------- ---------- ---------- ENSP00000249041/1-368 HHALILCFWY GRFAFSPATY ACRLASHCLA YANSCLNPLV YALASRHFRA bmy_01137T0/1-323 ---------- ------PATY ACRLASHCLA YANSCLNPLV YALASRHFRA ENSTTRP00000004532/1-332 HHALILCFWY GRFAFSPATY ACRLASHCLA YANSCLNPLV YALASRHFRA 301 350 ENSBTAP00000011663/1-319 -------AXR HRPRARCPPG GARRALRRVR PGPGDAAGCS GNARPRGRLP ENSP00000249041/1-368 RFRRLWPCGR RRR-----HR -ARRALRRVR PASSGPPGCP GDARPSGRLL bmy_01137T0/1-323 RLRRLWPCGR RRPRARCPPG -ARRALRRVR PASPGPAGCL GDARSRGRLP ENSTTRP00000004532/1-332 RLRRLWPCGR RRH--RCPPG -AHRALRPVR PASPG----- ---------- 351 400 ENSBTAP00000011663/1-319 AGGDWGGERG PEPAGGGEAC RALP----- ENSP00000249041/1-368 AGGGQGPEPR EGPVHGGEAA R-----GPE bmy_01137T0/1-323 TGGGWGGEPG REPARGREAG RALPARGPE ENSTTRP00000004532/1-332 ---------- ---------- ---------