KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:28 2014 Check: 00 .. Name: ENSP00000307694/1-526 Len: 535 Check: 9291 Weight: 1.00 Name: ENSBTAP00000011681/1-527 Len: 535 Check: 9169 Weight: 1.00 Name: ENSTTRP00000007208/1-529 Len: 535 Check: 3760 Weight: 1.00 Name: bmy_08780T0/1-534 Len: 535 Check: 843 Weight: 1.00 Name: BACU015462/1-450 Len: 535 Check: 5191 Weight: 1.00 // 1 50 ENSP00000307694/1-526 ------MLML LVRGTHYENL RSKVVLPTPL GGRSTETFVS EFPGPDTGIR ENSBTAP00000011681/1-527 ------PIVL IIKGTAYQML HME--LPTRL AGQGAADMVS ESPGPSARVP ENSTTRP00000007208/1-529 ------TVKL LIQGTHLKNF WSRRILSTTL DSQRAAAMVS ECPGPGARVP bmy_08780T0/1-534 MEQGGDLDLV FVEGRSSGNA PFSVPVPCP- QGQRAAAMVS ESPRPGARVP BACU015462/1-450 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000307694/1-526 WRRSDEALRV NVGGVRRQLS ARALARFPGT RLGRLQAAAS EEQARRLCDD ENSBTAP00000011681/1-527 WRRSDEALRV NVGGVRRRLS ARALARFPGT RLGRLQAAAS EEQARRLCDD ENSTTRP00000007208/1-529 WRRSDEALRV NVGGVRRRLS ARALARFPGT RLGRLQAAAS EEQARRLCDD bmy_08780T0/1-534 WRRSDEALRV NVGGVRRRLS ARALARFPGT RLGRLQAAAS EEQARRLCDD BACU015462/1-450 ---------- ---------- ---------- -----MAAAS EEQARRLCDD 101 150 ENSP00000307694/1-526 YDEAAREFYF DRHPGFFLSL LHFYRTGHLH VLDELCVFAF GQEADYWGLG ENSBTAP00000011681/1-527 YDAAAREFYF DRHPGFFLGL LHFYRTGHLH VLDELCVFAF GQEADYWGLG ENSTTRP00000007208/1-529 YDAAAREFYF DRHPGFFLSL LHFYRTGRLH VLDEQCVFAF GQEADYWGLG bmy_08780T0/1-534 YDAAAREFYF DRHPGFFLSL LHFYRTGRLH VLDEQCVFAF GQEADYWGLG BACU015462/1-450 YDAAAREFYF DRHPGFFLSL LHFYRTGRLH VLDEQCVFAF GQEADYWGLG 151 200 ENSP00000307694/1-526 ENALAACCRA RYLERRLTQP HAWDEDSDTP SSVDPCPDEI SDVQRELARY ENSBTAP00000011681/1-527 ESALATCCRA RYLERRVTRP RAWDEDSDTP SSVDPCPDEI SDVQRELARY ENSTTRP00000007208/1-529 ESALATCCRA RYLERRVARP RVWDEDSDTL SSVGPCPEEI SDVQRELAHY bmy_08780T0/1-534 ESALATCCRA RYLERRVARP RVWDEDSDTL SSVDPCPEEI SDVQRELARY BACU015462/1-450 ESALATCCRA RYLERRVARP RVWDEDSDTL SSVDPCPEEI SDVQRELARY 201 250 ENSP00000307694/1-526 GAARCGRLRR RLWLTMENPG YSLPSKLFSC VSISVVLASI AAMCIHSLPE ENSBTAP00000011681/1-527 GAARCGRLRR RLWLTMENPG YSLPSKLFSC VSIGVVLASI AAMCIHSLPE ENSTTRP00000007208/1-529 RAVRCGRLRR RLWLTMENPG YSLPSKLFSC VSIGVVLASI AAMCIHSLPE bmy_08780T0/1-534 GAVRCGRLRR RLWLTMENPG YSLPSKLFSC VSIGVVLASI AAMCIHSLPE BACU015462/1-450 GAVRCGRLRR RLWLTMENPG YSLPSKLFSC VSIGVVLASI AAMCIHSLPE 251 300 ENSP00000307694/1-526 YQAREAAAAV AAVAAGRSPE GVRDDPVLRR LEYFCIAWFS FEVSSRLLLA ENSBTAP00000011681/1-527 YQAREAAAAV AAVAAGRSPE GVRDDPVLRR LEYFCIAWFS FEVSSRLLLA ENSTTRP00000007208/1-529 YQAREAAAAV AAVAAGRRAE GLRDDPVLRH LEYFCIAWFS FEVSSRLLLA bmy_08780T0/1-534 YQAREAAAAV AAVAAGRRVE GLRDDPVLRH LEYFCIAWFS FEVSSRLLLA BACU015462/1-450 YQAREAAAAV AAVAAGRRVE GLRDDPVLRH LEYFCIAWFS FEVSSRLLLA 301 350 ENSP00000307694/1-526 PSTRNFFCHP LNLIDIVSVL PFYLTLLAGV ALGDQ---GG KEFGHLGKVV ENSBTAP00000011681/1-527 PSTRNFFCHP LNLIDIVSVL PFYLTLLAGV ALRDRGGAGG EELGDLGKVV ENSTTRP00000007208/1-529 PSTRNFFCHP LNLIDIVSVL PFYLTLLAGV ALQDRGGAGG EELGDLGKVV bmy_08780T0/1-534 PSTRNFFCHP LNLIDIVSVL PFYLTLLAGV ALRDRGGAGG EELGDLGKVV BACU015462/1-450 PSTRNFFCHP LNLIDIVSVL PFYLTLLAGV ALRDRVGAGG EELGDLGKVV 351 400 ENSP00000307694/1-526 QVFRLMRIFR VLKLARHSTG LRSLGATLKH SYREVGILLL YLAVGVSVFS ENSBTAP00000011681/1-527 QVFRLMRIFR VLKLARHSTG LRSLGATLKH SYREVGILLL YLAVGVSVFS ENSTTRP00000007208/1-529 QVFRLMRIFR VLKLARHSTG LRSLGATLKH SYREVGILLL YLAVGVSVFS bmy_08780T0/1-534 QVFRLMRIFR VLKLARHSTG LRSLGATLKH SYREVGILLL YLAVGVSVFS BACU015462/1-450 QVFRLMRIFR VLKLARHSTG LRSLGATLKH SYREVGILLL YLAVGVSVFS 401 450 ENSP00000307694/1-526 GVAYTAEKEE DVGFNTIPAC WWWGTVSMTT VGYGDVVPVT VAGKLAASGC ENSBTAP00000011681/1-527 GVAYTAEKEE DVGFDTIPAC WWWGTVSMTT VGYGDVVPVT VAGKLAASGC ENSTTRP00000007208/1-529 CVAYTAEKEE DVGFDTIPAC WWWGTVSMTT VGYGDVVPVT VAGKLAASGC bmy_08780T0/1-534 CVAYTAEKEE DVGFDTIPAC WWWGMVSMTT VGYGDVVPVT VAGKLAASGC BACU015462/1-450 CVAYTAEKEE DVGFDTIPAC WWWGTVSMTT VGYGDVVPVT VAGKLAASGC 451 500 ENSP00000307694/1-526 ILGGILVVAL PITIIFNKFS HFYRRQKALE AAVRNSNHQE FEDLLSSIDG ENSBTAP00000011681/1-527 ILGGILVVAL PITIIFNKFS HFYRRQKALE AAVRNSDHRE FEDLLSSIDG ENSTTRP00000007208/1-529 ILGGILVVAL PITIIFNKFS HFYRRQKALE AAVRNSDHWE FEDLLSSVDG bmy_08780T0/1-534 ILGGILVVAL PITIIFNKFS HFYRCQKALE AAVRNSDHWE FEDLLSSVDG BACU015462/1-450 ILGGILVVAL PITIIFNKFS HFYRCQKALE AAVRNSDHWE FEDLLSSVDG 501 550 ENSP00000307694/1-526 VSEASLETSR ETSQEGQSAD LESQAPSEPP HPQMY ENSBTAP00000011681/1-527 VSEASLETSR ETSQEGRSED LEAQASSGPP NSQVY ENSTTRP00000007208/1-529 VSEASLETSR ETSQEGRSED LEAQATSGPP NSQVY bmy_08780T0/1-534 VSEASLETSR ETSQEGRSED LEVQATSGPP NSQVY BACU015462/1-450 VSEASLETSR ETSQEGRSED LEAQATSGPP NSQVY