KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:29 2014 Check: 00 .. Name: bmy_10772T0/1-443 Len: 774 Check: 468 Weight: 1.00 Name: ENSBTAP00000011682/1-729 Len: 774 Check: 6566 Weight: 1.00 Name: ENSTTRP00000008835/1-724 Len: 774 Check: 517 Weight: 1.00 Name: ENSP00000424838/1-724 Len: 774 Check: 8256 Weight: 1.00 Name: BACU016756/1-184 Len: 774 Check: 6176 Weight: 1.00 // 1 50 bmy_10772T0/1-443 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011682/1-729 MGDEDWEAEI IKPHISSYVP VFEKDRYSSG ANGDTFNRTP ASSSEMGDGS ENSTTRP00000008835/1-724 MGDEDWEAEI IKPRMSSYVP VFEKDRYSSG ANGDTFNRTL ASLSEMDDGS ENSP00000424838/1-724 MGDEDWEAEI -NPHMSSYVP IFEKDRY-SG ENGDNFNRTP ASSSEMDDGP BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_10772T0/1-443 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011682/1-729 SRRDHFMRSG FASGRSLGNR DPGESNKREN TSTVGGFGVG KSFGNRGFSN ENSTTRP00000008835/1-724 SRRDHFMRSR FAAGRSLGNR DPGESNTREN TSTVGGFRVG RSFGNRXXXX ENSP00000424838/1-724 SRRDHFMKSG FASGRNFGNR DAGECNKRDN TSTMGGFGVG KSFGNRGFSN BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_10772T0/1-443 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011682/1-729 NKFEEGDSSG FWRESSIDCE DNQTRNRGFS KRGGYQDGND SEALGSSRRG ENSTTRP00000008835/1-724 XXXXXXXXXX XXXXSNNDRE DNQTRNRGFS KRGGCQDGND SEASGSSRRG ENSP00000424838/1-724 SRFEDGDSSG FWRESSNDCE DNPTRNRGFS KRGGYRDGNN SEASGPYRRG BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_10772T0/1-443 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011682/1-729 GRGSFRGCRG GFGRGSPNSD YEQDEGTQRS GGIFGSRRSA LSGAGNGDTF ENSTTRP00000008835/1-724 GRGSF-GCCG GFVLGSPNSK YEQDEGTQCT GGIFGSRRSA LTGVGKGDTY ENSP00000424838/1-724 GRGSFRGCRG GFGLGSPNND LDPDECMQRT GGLFGSRRPV LSGTGNGDTS BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_10772T0/1-443 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011682/1-729 QSRSGGGSGR GGYKGLNEEV ITGSGKNSWK SEAEGGESGD TQGPKVTYIP ENSTTRP00000008835/1-724 QSRSGSGSGR GGYKGLNEEV ITGSGKNSWK SEAKGGESGD TQGPKVTYIP ENSP00000424838/1-724 QSRSGSGSER GGYKGLNEEV ITGSGKNSWK SEAEGGESSD TQGPKVTYIP BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_10772T0/1-443 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011682/1-729 PPPPEDEDSI FAHYQTGINF DKYDTILVEV SGHDPPPAIL TFEEANLCQT ENSTTRP00000008835/1-724 PPPPEDENSI FAHYQTGINF DKYDAILVEV SGHDVPPAIL TFEEANLCQT ENSP00000424838/1-724 PPPPEDEDSI FAHYQTGINF DKYDTILVEV SGHDAPPAIL TFEEANLCQT BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_10772T0/1-443 ---------- ---------- ---------- MACAQTGSGK TAAFLLPILA ENSBTAP00000011682/1-729 LNNNIAKAGY TKLTPVQKYS IPIIQGGRDL MACAQTGSGK TAAFLLPILA ENSTTRP00000008835/1-724 LNRNIAKAGY TKLTPVQKYS IPIILGGRDL MACAQTGSGK TAAFLLPILA ENSP00000424838/1-724 LNNNIAKAGY TKLTPVQKYS IPIILAGRDL MACAQTGSGK TAAFLLPILA BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_10772T0/1-443 HMMRDGVTAS RFKELQEPEC IIVAPTRELI SQIYLEARKF SFGTCVRAVV ENSBTAP00000011682/1-729 HMMRDGITAS RFKELQEPEC IIVAPTRELI NQIYLEARKF SFGTCVRAVV ENSTTRP00000008835/1-724 HMMRDGVTAS RFKELQEPEC IIVAPTRELI SQIYLEARKF SFGTCVRAVA ENSP00000424838/1-724 HMMHDGITAS RFKELQEPEC IIVAPTRELV NQIYLEARKF SFGTCVRAVV BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_10772T0/1-443 IYGGTQLGHS IRQIVQGCNI LCATPGRLMD IIGKEKIGLR QVKYIVLDEA ENSBTAP00000011682/1-729 IYGGTQLGHS IRQIVQGCNI LCATPGRLMD VIGKEKIGLR QVKYLVLDEA ENSTTRP00000008835/1-724 IYGGTQLGHS IRQIVQGCNI LCATPGRLMD IIRKEKIGLR QVKYIVLDEA ENSP00000424838/1-724 IYGGTQLGHS IRQIVQGCNI LCATPGRLMD IIGKEKIGLK QIKYLVLDEA BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_10772T0/1-443 DRMLDMGFGP EMKKLISCPG MPSKEQRQTL MFSATFPEEI QRLAGEFLKS ENSBTAP00000011682/1-729 DRMLDMGFGP EMKKLISCPG MPSKEQRQTL MFSATFPEEI QRLAGEFLKS ENSTTRP00000008835/1-724 DRMLDMGFGP EMKKLISCPG MPSKEQRQTL MFSATFPEEI QRLAGEFLKS ENSP00000424838/1-724 DRMLDMGFGP EMKKLISCPG MPSKEQRQTL MFSATFPEEI QRLAAEFLKS BACU016756/1-184 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_10772T0/1-443 NYLFVAVGQV GGACRDVQQT ILQVGQYSKR EKLVEILRNI GDERTMVFVE ENSBTAP00000011682/1-729 NYLFVAVGQV GGACRDVQQT ILQVGQYSKR EKLVEILRNI GDERTMVFVE ENSTTRP00000008835/1-724 NYLFVAVGQV GGACRDVQQT ILQVGQYSKR EKLVEILRNI GDERTMVFVE ENSP00000424838/1-724 NYLFVAVGQV GGACRDVQQT VLQVGQFSKR EKLVEILRNI GDERTMVFVE BACU016756/1-184 ---------- ---------- ---------- ---------- -----MVFVE 551 600 bmy_10772T0/1-443 TKKKADFIAT FLCQEKISTT SIHGDREQRE REQALGDFRC GKCPVLVATS ENSBTAP00000011682/1-729 TKKKADFIAT FLCQEKISTT SIHGDREQRE REQALGDFRC GKCPVLVATS ENSTTRP00000008835/1-724 TKKKADFIAT FLCQEKISTT SIHGDREQRE REQALGDFRC GKCLALVATS ENSP00000424838/1-724 TKKKADFIAT FLCQEKISTT SIHGDREQRE REQALGDFRF GKCPVLVATS BACU016756/1-184 TKKKADFIAT FLCQEKISTT SIHGDREQRE REQALGDFRC GKCPVLVATS 601 650 bmy_10772T0/1-443 VAARGLDIEN VQHVINFDLP STIDEYVHRI GRTGRCGNTG RAISFFNPES ENSBTAP00000011682/1-729 VAARGLDIEN VQHVINFDLP STIDEYVHRI GRTGRCGNTG RAISFFDLES ENSTTRP00000008835/1-724 VAARGLDIEN VQHVINFDLP STIDEYVHRI GRTGRCGNTG RAISFFDPES ENSP00000424838/1-724 VAARGLDIEN VQHVINFDLP STIDEYVHRI GRTGRCGNTG RAISFFDLES BACU016756/1-184 VAARGLDIEN VQHVINFDLP STIDEYVHRI GRTGRCGNTG RAISFFDTES 651 700 bmy_10772T0/1-443 DNHLAQPLVK VLSDKAKGAP VLEKTLGYNI WYFPENNTNL TETMNTTNQQ ENSBTAP00000011682/1-729 DSQLAQPLVK VLSDAQQDVP AWLEEIAFST -YGPGFSGNA RGNVFASVDT ENSTTRP00000008835/1-724 DGHLAQPLVK VLSDAQQDVP AWLEEIAFSI -YVTGFSDST R-NMFVSIDT ENSP00000424838/1-724 DNHLAQPLVK VLTDAQQDVP AWLEEIAFST -YIPGFSGST RGNVFASVDT BACU016756/1-184 DNHLAQPLVK VLSDAQQEVP AWLEEIAFSM -YVPGFSGST RGNVFVSIDT 701 750 bmy_10772T0/1-443 LKLYQGGKTY RVYVISYNSL GESPVATLRI P-AIDEKRME FSVLPNFTIC ENSBTAP00000011682/1-729 RKNYHGK--- -------SSL NTAGFSSTQA PNPVDDESWD ---------- ENSTTRP00000008835/1-724 RK---GK--- -------SSL NTARFSSSQA PNPVDDESWD ---------- ENSP00000424838/1-724 RK---GK--- -------STL NTAGFSSSQA PNPVDDESWD ---------- BACU016756/1-184 RKNYQGK--- -------SSL NTAGFSSSQA PNPVDDESWD ---------- 751 800 bmy_10772T0/1-443 VRRNARKVSR GLDLETEIKM CKPD ENSBTAP00000011682/1-729 ---------- ---------- ---- ENSTTRP00000008835/1-724 ---------- ---------- ---- ENSP00000424838/1-724 ---------- ---------- ---- BACU016756/1-184 ---------- ---------- ----