KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:32 2014 Check: 00 .. Name: ENSP00000233121/1-281 Len: 334 Check: 1464 Weight: 1.00 Name: BACU014539/1-334 Len: 334 Check: 5808 Weight: 1.00 Name: ENSBTAP00000011696/1-266 Len: 334 Check: 9004 Weight: 1.00 Name: bmy_01067T0/1-281 Len: 334 Check: 1064 Weight: 1.00 Name: ENSTTRP00000004781/1-259 Len: 334 Check: 1288 Weight: 1.00 // 1 50 ENSP00000233121/1-281 ---MAVNVYS TSVTSENLSR HDMLAWVNDS LHLNYTKIEQ LCSGAAY--- BACU014539/1-334 SWGMAVNVYS TSVTSENLSR HDMLAWVNDS LHLNYTKIEQ LCSGAAYCQF ENSBTAP00000011696/1-266 ---MAVNVYS TSVTSENLSR HDMLAWVNDS LHLNYTKIEQ LCSGAAY--- bmy_01067T0/1-281 ---MAVNVYS TSVTSENLSR HDMLAWVNDS LHLNYTKIEQ LCSGAAY--- ENSTTRP00000004781/1-259 ---MAVNVYS TSVTSENLSR HDMLAWVNDS LHLNYTKIEQ LCSGAAY--- 51 100 ENSP00000233121/1-281 ---------- ---------- ---------- ---------- -------CQF BACU014539/1-334 MDMLFPGCVH LRKVKFQAKL EHEYIHNFKV LQAAFKKMGV DKVGAAYCQF ENSBTAP00000011696/1-266 ---------- ---------- ---------- ---------- -------CQF bmy_01067T0/1-281 ---------- ---------- ---------- ---------- -------CQF ENSTTRP00000004781/1-259 ---------- ---------- ---------- ---------- -------CQF 101 150 ENSP00000233121/1-281 MDMLFPGCVH LRKVKFQAKL EHEYIHNFKV LQAAFKKMGV DKIIPVEKLV BACU014539/1-334 MDMLFPGCVH LRKVKFQAKL EHEYIHNFKV LQAAFKKMGV DKIIPVEKLV ENSBTAP00000011696/1-266 MDMLFPGCVH LRKVKFQAKL EHEYIHNFKV LQAAFKKMGV DKIIPVEKLV bmy_01067T0/1-281 MDMLFPGCVH LRKVKFQAKL EHEYIHNFKV LQAAFKKMGV DKIIPVEKLV ENSTTRP00000004781/1-259 MDMLFPGCVH LRKVKFQAKL EHEYIHNFKV LQAAFKKMGV DKIIPVEKLV 151 200 ENSP00000233121/1-281 KGKFQDNFEF IQWFKKFFDA NYDGKDYNPL LARQGQDVAP PPNPGDQIFN BACU014539/1-334 KGKFQDNFEF IQWFKKFFDA NYDGKDYNPL LARQGQDVAP PPNPGDQIFN ENSBTAP00000011696/1-266 KGKFQDNFEF IQWFKKFFDA NYDGKDYNPL LARQGQDVAP PPNP------ bmy_01067T0/1-281 KGKFQDNFEF IQWFKKFFDA NYDGKDYNPL LARQGQDVAP PPNPGDQIFN ENSTTRP00000004781/1-259 KGKFQDNFEF IQWFKKFFDA NYDGKDYNPL LARQGQDVAP PPNPGDQIFN 201 250 ENSP00000233121/1-281 KSKKLIGTAV PQRTSPTGPK NMQTSGRLSN VAPPCILRKN PPSARNGGHE BACU014539/1-334 KSKKLIGTAV PQRTSPTGPK NMQTSGRLSN VAPPCILRKN PPSARNGGHE ENSBTAP00000011696/1-266 ---------V PQRTSPTGPK NMQTSGRLSN VAPPCILRKN PPSARNGGHE bmy_01067T0/1-281 KSKKLIGTAV PQRTSPTGPK NMQTSGRLSN VAPPCILRKN PPSARNGGHE ENSTTRP00000004781/1-259 KSKKLIGTAV PQRTSPTGPK NMQTSGRLSN VAPPCILRKN PPSARNGGHE 251 300 ENSP00000233121/1-281 TDAQILELNQ QLVDLKLTVD GLEKERDFYF SKLRDIELIC QEHESENSPV BACU014539/1-334 TDAQILELNQ QLLDLKLTVD GLEKERDFYF SKLRDIELIC QEHESENSPV ENSBTAP00000011696/1-266 TDAQILELNQ QLLDLKLTVD GLEKERDFYF SKLRDIELIC QEHESENSPV bmy_01067T0/1-281 TDAQILELNQ QLLDLKLTVD GLEKERDFYF SKLRDIELIC QEHESENSPV ENSTTRP00000004781/1-259 TDAQILELNQ QLLDLKLTVD GLEKERDFYF SKLRDIELIC QEHESENSPV 301 350 ENSP00000233121/1-281 ISGIIGILYA TEEGFAPPED DEIEEHQQED QDEY BACU014539/1-334 ISGIIGILYA TEEGFAPPED DEIEEHQQED QDEY ENSBTAP00000011696/1-266 ISGIIGILYA TEEGFAPPED DEIEEHQQED QDEY bmy_01067T0/1-281 ISGIIGILYA TEEGFAPPED DEIEEHQQED QDEY ENSTTRP00000004781/1-259 ISGIIGILYA TE-------- ---------- ----