KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:33 2014 Check: 00 .. Name: ENSP00000311257/1-926 Len: 950 Check: 8824 Weight: 1.00 Name: ENSBTAP00000011697/1-869 Len: 950 Check: 730 Weight: 1.00 Name: ENSTTRP00000008916/1-949 Len: 950 Check: 3647 Weight: 1.00 Name: bmy_13039T0/1-882 Len: 950 Check: 2302 Weight: 1.00 Name: BACU007177/1-878 Len: 950 Check: 4977 Weight: 1.00 // 1 50 ENSP00000311257/1-926 ---------- ---------- ----MKKTRS TTLRRAWPSS DFSDRASDRM ENSBTAP00000011697/1-869 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008916/1-949 TDEAARCAPA LRPRGSGQRV ALPTMKKTRS TTLRRAWPSS DFSDRASDRM bmy_13039T0/1-882 ---------- ---------- ---------- ---------- ---------- BACU007177/1-878 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000311257/1-926 RSRSEKDYRL HKRFPAAFAP QASRGYMTSG DVSPISMSPI SQSQFIPLGE ENSBTAP00000011697/1-869 ---------- ---------- ---------- DVSPISMSPI SQSQFIPLEE ENSTTRP00000008916/1-949 RSRSEKDYRL HKRFPAAFAP QASRGYMT-S DVSPISMSPI SQSQFIPLGE bmy_13039T0/1-882 ---------M NHLLENCL-- ------FT-G DVSPISMSPI SQSQFIPLGE BACU007177/1-878 ---------- ---MPEPL-- ------VG-G DVSPISMSPI SQSQFIPLGE 101 150 ENSP00000311257/1-926 ILCLAISAMN SARKPVTQEA LMEHLTTCFP GVPTPSQEIL RHTLNTLVRE ENSBTAP00000011697/1-869 I-CLAISAMN SARKPVTQEA LMEHLTTCFP GVPTPSQEIL RHTLNTLVRE ENSTTRP00000008916/1-949 ILCLAISAMN SARKPVTQEA LMEHLTTCFP GVPTPSQEIL RHTLNTLVRE bmy_13039T0/1-882 ILCLAISAMN SARKPVTQEA LMDHLTTCFP GVPTPSQEIL RHTLNTLVRE BACU007177/1-878 ILCLAISAMN SARKPVTQEA LMEHLTTCFP GVPTPSQEIL RHTLNTLVRE 151 200 ENSP00000311257/1-926 RKIYPTPDGY FIVTPQTYFI TPSLIRTNSK WYHLDERIPD RSQCTSPQPG ENSBTAP00000011697/1-869 RKIYPTPDGY FIVTPQTYFI TPSLIRTNSK WYHLDERIPD RSQCTSPQPG ENSTTRP00000008916/1-949 RKIYPTPDGY FIVTPQTYFI TPSLIRTNSK WYHLDERIPD RSQCTSPQPG bmy_13039T0/1-882 RKIYPTPDGY FIVTPQTYFI TPSLIRTNSK WYHLDERIPD RSQCTSPQPG BACU007177/1-878 RKIYPTPDGY FIVTPQTYFI TPSLIRTNSK WYHLDERIPD RSQCTSPQPG 201 250 ENSP00000311257/1-926 TITPSASGCV RERTLPRNHC DSCHCCREDV HSTHAPTLQR KSAKDCKDPY ENSBTAP00000011697/1-869 TITPSASGCV RERTLPRNHC DSCHCCREDV HAVHAATLQR KPAKDCKDPY ENSTTRP00000008916/1-949 TITPSASGCV RERTLPRNHC DSCHCCREDV HGVHTATLQR KTAKDCKDPY bmy_13039T0/1-882 TITPSASGCV RERTLPRNHC DSCHCCREDV HGVHAATLQR KPAKDCKDPY BACU007177/1-878 TITPSASGCV RERTLPRNHC DSCHCCREDV HGVHAATLQR KPAKDCKDPY 251 300 ENSP00000311257/1-926 CPPSLCQVPP TEKSKSTVNF SYKTETLSKP KDSEKQSKKF GLKLFRLSFK ENSBTAP00000011697/1-869 CPPSLCQVPA TEKSKSTVNF SYKTETVSKP KDGEKQSKKF GLKLFRLSFK ENSTTRP00000008916/1-949 CPPSLCQVPP TEKSKNTVNF SYKTETLSKP KDSEKQSKKF GLKLFRLSFK bmy_13039T0/1-882 CPPSLCQVPP TEKSKSTVNF SYKTETLSKP KDSEKQSKKF GLKLFRLSFK BACU007177/1-878 CPPSLCQVPP TEKSKSTVNF SYKTETLSKP KDGEKQSKKF GLKLFRLSFK 301 350 ENSP00000311257/1-926 KDKTKQLANF SAQFPPEEWP LRDEDTPATI PREVEMEIIR RINPDLTVEN ENSBTAP00000011697/1-869 KDKTKQLANF SAQFPPEEWP LRDEDTPTTI PREVEMEIIR RINPDLTVEN ENSTTRP00000008916/1-949 KDKTKQLANF SAQFPPEEWP LRDEDTPTTI PREVEMEIIR RINPDLTVEN bmy_13039T0/1-882 XDKTKQLANF SAQFPPEEWP LRDEDTPTTI PREVEMEIIR RINPDLTVEN BACU007177/1-878 KDKTKQLANF SAQFPPEEWP LRDEDTPTTI PREVEMEIIR RINPDLTVEN 351 400 ENSP00000311257/1-926 VMRHTALMKK LEEEKAQRSK AGSSAHHSGR SKKSRTHRKS HGKSRSHSKT ENSBTAP00000011697/1-869 VMRHTALMKK LEEEKAHRSK AGSSAHHSGR SKKSRTHRKS HGKSRSHSKT ENSTTRP00000008916/1-949 VMRHTALMKK LEEEKAHRSK AGSSAHHSGR SKKSRTHRKS HGKSRSHSKT bmy_13039T0/1-882 VMRHTALMKK LEEEKAHRSK AGSSAHHSGR SKKSRTHRKS HGKSRSHSKT BACU007177/1-878 VMRHTALMKK LEEEKAHRSK AGSSAHHSGR SKKSRTHRKS HGKSRSHSKT 401 450 ENSP00000311257/1-926 RVSKGDPSDG SHLDIPAERE YDFCDPLTRV PREGCFIIEH KGDNFIMHSN ENSBTAP00000011697/1-869 RVSKGDPSDG SHLDIPGERE YDFCDPLTRA PREGCFIIEH KGDNFIMHSN ENSTTRP00000008916/1-949 RVSKGDPSDG SHLDIPGERE YDFCDPLTRA PREGCFIIEH KGDNFIMHSN bmy_13039T0/1-882 RVSKGDPSDG SHLDIPGERE YDFCDPLTRA PREGCFIIEH KGDNFIMHSN BACU007177/1-878 RVSKGDPSDG SHLDVPAERE YDFCDPLTRA PREGCFIIEH KGDNFIMHSN 451 500 ENSP00000311257/1-926 TNVLESHFPM TPEWDVSGEL AKRRTEMPFP EPSRGSSHSK VHRSHSHTQD ENSBTAP00000011697/1-869 PNVIESHFPM TPEWDVSGEL AKRRTEMPFP EPSRGSSHSK VHRSHSHTQD ENSTTRP00000008916/1-949 ANVIESHFPM TPEWDVSGEL AKRRTEMPFP EPSRGSSHSK VHRSHSHTQD bmy_13039T0/1-882 ANVIESHFPM TPEWDVSGEL AKRRTEMPFP EPSRGSSHSK VHRSHSHTQD BACU007177/1-878 ANVIESHFPM TPEWDVSGEL AKRRTEMPFP EPSRGSSHSK VHRSHSHTQD 501 550 ENSP00000311257/1-926 RRSRNERSNK AKERSRSMDN SKGPLGASSL GTPEDLAEGC SQDDQTPSQS ENSBTAP00000011697/1-869 RRSRNERSNK AKERSRSMDN SKGPLGASSL GTPEDLAEGC SQDDQTPSQS ENSTTRP00000008916/1-949 RRSRNERSNK AKERSRSMDN SKGPLGASSL GMPEDLAEGC SQDDQTPSQS bmy_13039T0/1-882 RRSRNERSNK AKERSRSMDN SKGPLGASSL GMPEDLAEGC SQDDQTPSQS BACU007177/1-878 RRSRNERSNK AKERSRSMDN SKGPLGASSL GMPEDLAEGC SQDDQTPSQS 551 600 ENSP00000311257/1-926 YIDDSTLRPA QTVSLQRAHI SSTSYKEVCI PEIVSGSKEP SSACSLLEPG ENSBTAP00000011697/1-869 YIDDSTLRPT QTIGHQRAHV SSASYKEVCI PEIVSGSKEP PSACSLLEPG ENSTTRP00000008916/1-949 YIDDSTLRRA QTVSHQRAHI SSTSYKEVCI PEIVSGSKEP LSACSLLEPG bmy_13039T0/1-882 YIDDSTLRPA QTVSHQRAHI SSTSYKEVCI PEIVSGSKEP PSACSLLEPG BACU007177/1-878 YIDDSTLRPV QTVSHQRAHI SSTSYKEVCI PEIVSGSKEP PSACSLLEPG 601 650 ENSP00000311257/1-926 KPPESLPSYG ELNSCPTKTA TDDYFQCNTS SETVLTAPSP LGKNKEDHDT ENSBTAP00000011697/1-869 KAPESLPSFG ELNSCPTKTA ADDYFQCNTS SETVLTAPSP LGKNKEDHDT ENSTTRP00000008916/1-949 KLPESLPSFG EINSCPTKTG ADDYLQCNTS SETVLTEPSR MGKNKEDHDT bmy_13039T0/1-882 KPPEGLPSFG ELNSCPTKTA ADDYFQCNTS SETVLTAPSP LGKNKEDHDT BACU007177/1-878 KPPEGLPSFG ELSSCPTKTT ADDYFQCNTS SETVLTAPSP LGKNKEDHDT 651 700 ENSP00000311257/1-926 LTLAEGVKKL SPSDRQVPHS SREPVGHKEE SPKGPGGGPA ASGGVAEGIA ENSBTAP00000011697/1-869 LTLVEGVKKL PLSDRQAPHS SREPAGHKEE SPKGPGGGPV APGTVVEGLA ENSTTRP00000008916/1-949 LTLAEGVKKL PLSDRQAPHP SREPVGHKEE SPKGPGGGPA ASGAVAEGIA bmy_13039T0/1-882 LTLAEGVKKL PLSDRQAPHP SREPVGHKEE SPKGPGGGPA ASGAVAEGIA BACU007177/1-878 LTLAEGVKKL PLSDRQAPHP SREPVGHKEE SPKGPGGVPA ASGAVAEGIA 701 750 ENSP00000311257/1-926 NGRLVQHHGA EPSSLDKRKE IFSKDTLFKP LHSTLSVNSY HKSSLSLLKS ENSBTAP00000011697/1-869 NGRLIQHHGA EPSTLDKRKE IFSKDTLFKP LHSTLSVNSY HKSTLSLLKS ENSTTRP00000008916/1-949 NGRLIQHHSA EPSSLDKRKE IFSKDTLFKP LHSTLSVNSY HKSSLSVLKS bmy_13039T0/1-882 NGRLIQHHSA EPSSLDKRKE IFSKDTLFKP LHSTLSVNSY HKSSLSVLKS BACU007177/1-878 NGRLIQHHSA EPSSLDKRKE IFSKDTLFKP LHSTLSVNSY HKSSLSVLKS 751 800 ENSP00000311257/1-926 HPKTPADTLP GRCEKLEPSL GTSAAQAMPA SQRQQESGGN QEASFDYYNV ENSBTAP00000011697/1-869 HPKTPADTLP GRCEKPEPSL GTSATPALPA SQRQQESVGN QEASFDYYNV ENSTTRP00000008916/1-949 HPKTPADTLP GRCEKLEPSL GTSAAQAMPA SQRQQESVGN QEASFDYYNV bmy_13039T0/1-882 HPKTPADTLP GRCEKLEPSL GTSAAQAMPA SQRQQESVGN QEASFDYYNV BACU007177/1-878 HPKTPADTLP GRCEKLEPSL GTSAAQAMPA SQRQQESVGN QEASFDYYNV 801 850 ENSP00000311257/1-926 SDDDDSEEGA NKNTEEEKNR EDVGTMQWLL EREKERDLQR KFEKNLTLLA ENSBTAP00000011697/1-869 SDDDESEEGA NKNAEEEKNR DDVGTMQWLL EREKERDLQR KFEKNLTLLA ENSTTRP00000008916/1-949 SDDDESEEGA NKNTEEEKNR DDVGTMQWLL EREKERDLQR KFEKNLTLLA bmy_13039T0/1-882 SDDDESEEGA NKNTEEEKNR DDVGTMQWLL EREKERDLQR KFEKNLTLLA BACU007177/1-878 SDDDESEEGA NKNTEEEKNR DDVGTMQWLL EREKERDLQR KFEKNLTLLA 851 900 ENSP00000311257/1-926 PKETDSSSNQ RATHSARLDS MDSSSITVDS GFNSPRTRES LASNTSSIVE ENSBTAP00000011697/1-869 PKEADSSSNQ RATHSARLDS MDSSSITVDS GFNSPRTRES LASNTSSIVE ENSTTRP00000008916/1-949 PKETDSSSNQ RATHSARLDS MDSSSITVDS GFNSPRTRES LASNTSSIVE bmy_13039T0/1-882 PKETDSSSNQ RATHSARLDS MDSSSITVDS GFNSPRTRES LASNTSSIVE BACU007177/1-878 PKETDSSSNQ RATHSARLDS MDSSSITVDS GFNSPRTRES LASNTSSIVE 901 950 ENSP00000311257/1-926 SNRRQNPALS PAHGGAGPAF NFRASAEPPT NEAEKLQKPS NCLQASVTSV ENSBTAP00000011697/1-869 SNRRQNPTWS PAHGGAGPAF SFRASTDPPT NEAEKLQKPS NCLQASVTSV ENSTTRP00000008916/1-949 SNRRQNPTWS PAHGGAGPAF NFRTSTDSPT NEAEKLQKPS SCLQASVTSV bmy_13039T0/1-882 SNRRQNPTWS PAHGGAGPAF NFRASTDSPT NEAEKLQKPS SCLQASVTSV BACU007177/1-878 SNRRQNPTWS PAHGGAGPAF NFRASTDSPT NEAEKLQKPS SCLQASVTSV