KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:44:33 2014 Check: 00 .. Name: ENSTTRP00000010716/1-492 Len: 514 Check: 1562 Weight: 1.00 Name: bmy_08853T0/1-514 Len: 514 Check: 2596 Weight: 1.00 Name: ENSBTAP00000011700/1-420 Len: 514 Check: 3505 Weight: 1.00 Name: ENSP00000378165/1-494 Len: 514 Check: 6037 Weight: 1.00 // 1 50 ENSTTRP00000010716/1-492 ---------- ------SAVM GRK-KNQLKP WCXXXXXXXX XXXXXXXXXX bmy_08853T0/1-514 RSYGSQEEEA AEAVVLVSFV GLKSRPSGGA VIRYCNRDFD DEKILIQHQK ENSBTAP00000011700/1-420 ---------- ---------M GRKKKKQLKP WCWYCNRDFD DEKILIQHQK ENSP00000378165/1-494 ---------- ---------M GRKKKKQLKP WCWYCNRDFD DEKILIQHQK 51 100 ENSTTRP00000010716/1-492 XXXXXXXXXX XXXXTGPGLA IHCMQVHKET IDAVPNAIPG RTDIELEIYG bmy_08853T0/1-514 AKHFKCHICH KKLYTGPGLA IHCMQVHKET IDAVPNAIPG RTDIELEIYG ENSBTAP00000011700/1-420 AKHFKCHICH KKLYTGPGLA IHCMQVHKET IDAVPNAIPG RTDIELEIYG ENSP00000378165/1-494 AKHFKCHICH KKLYTGPGLA IHCMQVHKET IDAVPNAIPG RTDIELEIYG 101 150 ENSTTRP00000010716/1-492 MEGIPEKDMD ERRRLLEQKT Q-ESQKKKQQ EDSDEYDDDD SAASTSFQPQ bmy_08853T0/1-514 MEGIPEKDMD ERRRLLEQKT QAESQKKKQQ EDSDEYDDDD SAASTSFQPQ ENSBTAP00000011700/1-420 MEGIPEKDMD ERRRLLEQKT QAESQKKKQQ DDSDEYDDDD SAASTSFQPQ ENSP00000378165/1-494 MEGIPEKDMD ERRRLLEQKT Q-ESQKKKQQ DDSDEYDDDD SAASTSFQPQ 151 200 ENSTTRP00000010716/1-492 PVQPQQGYIP PMAQPGLPPV PGAPGMPPGI PPLMPGVPPL MPGMPPVMPG bmy_08853T0/1-514 PVQPQQGYIP PMAQPGLPPV PGAPGMPPGI PPLMPGVPPL MPGMPPVMPG ENSBTAP00000011700/1-420 PVQPQQGYIP PMAQPGLPPV PGAPGMPPGI PPLMPGVPPL MPGMPPVMPG ENSP00000378165/1-494 PVQPQQGYIP PMAQPGLPPV PGAPGMPPGI PPLMPGVPPL MPGMPPVMPG 201 250 ENSTTRP00000010716/1-492 MPPGLHHQRK YTQSFCGENI MMPMGGMMPP GPGIPPLMPG MPPGMPPPVP bmy_08853T0/1-514 MPPGLHHQRK YTQSFCGENI MMPMGGMMPP GPGIPPLMPG MPPGMPPPVP ENSBTAP00000011700/1-420 MPPGLHHQRK YTQSFCGENI MMPMGGMMPP GPGIPPLMPG MPPGMPPPVP ENSP00000378165/1-494 MPPGLHHQRK YTQSFCGENI MMPMGGMMPP GPGIPPLMPG MPPGMPPPVP 251 300 ENSTTRP00000010716/1-492 RPGIPPMTQA QAVSAPGILN RPPAPTATVP APQPPVTKPL FPSAGQMGTP bmy_08853T0/1-514 RPGIPPMTQA QAVSAPGILN RPPAPTATVP APQPPVTKPL FPSAGQMGTP ENSBTAP00000011700/1-420 RPGIPPMTQA QAVSAPGILN RPPAPTATVP APQPPVTKPL FPSAG----- ENSP00000378165/1-494 RPGIPPMTQA QAVSAPGILN RPPAPTATVP APQPPVTKPL FPSAGQMGTP 301 350 ENSTTRP00000010716/1-492 VTSSSTASSN SESLSASSKA LFPSAAQAQA AVQGPVGTDF KPLNSTPATT bmy_08853T0/1-514 VTSSSTASSN SESLSASSKA LFPSAAQAQA AVQGPVGTDF KPLNSTPATT ENSBTAP00000011700/1-420 ---------- ---------- ------QAQA AVQGPVGTDF KPLNSTPATT ENSP00000378165/1-494 VTSSSTASSN SESLSASSKA LFPSTAQAQA AVQGPVGTDF KPLNSTPATT 351 400 ENSTTRP00000010716/1-492 TEPPKPTFPA YTQSTASTTS TTNSTAAKPA ASITSKPATL TTTSATSKLI bmy_08853T0/1-514 TEPPKPTFPA YTQSTASTTS TTNSTAAKPA ASITSKPATL TTTSATSKLI ENSBTAP00000011700/1-420 TEPPKPTFPA YTQSTASTTS TTNSTAAKPA ASITSKPATL TTTSATSKLI ENSP00000378165/1-494 TEPPKPTFPA YTQSTASTTS TTNSTAAKPA ASITSKPATL TTTSATSKLI 401 450 ENSTTRP00000010716/1-492 HPDEDISLEE RRAQLPKYQR NLPRPGQAPI GNPPVGPIGG MMPPQPGIPQ bmy_08853T0/1-514 HPDEDISLEE RRAQLPKYQR NLPRPGQAPI GNPPVGPIGG MMPPQPGIPQ ENSBTAP00000011700/1-420 HPDEDISLEE RRAQLPKYQR NLPRPGQAPM GNPPVGPIGG MMPPQPGIPQ ENSP00000378165/1-494 HPDEDISLEE RRAQLPKYQR NLPRPGQAPI GNPPVGPIGG MMPPQPGIPQ 451 500 ENSTTRP00000010716/1-492 QQGMRPPMPP HGQYGGHHQG MPGYLPGAMP PYGQGPPMVP PYQGGPPRPP bmy_08853T0/1-514 QQGMRPPMPP HGQYGGHHQG MPGYLPGAMP PYGQGPPMVP PYQGGPPRPP ENSBTAP00000011700/1-420 QQGMRPP--- ---------- ---------- ---------- ------PLTK ENSP00000378165/1-494 QQGMRPPMPP HGQYGGHHQG MPGYLPGAMP PYGQGPPMVP PYQGGPPRPP 501 550 ENSTTRP00000010716/1-492 MGMRPPVMSQ ---- bmy_08853T0/1-514 MGMRPPVMSQ GGXY ENSBTAP00000011700/1-420 VGLLDLRWE- ---- ENSP00000378165/1-494 MGMRPPVMSQ GGRY