KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:44:34 2014 Check: 00 .. Name: ENSP00000371607/1-713 Len: 775 Check: 3128 Weight: 1.00 Name: ENSBTAP00000011704/1-712 Len: 775 Check: 4158 Weight: 1.00 Name: bmy_22184T0/1-412 Len: 775 Check: 1668 Weight: 1.00 Name: BACU000148/1-566 Len: 775 Check: 7807 Weight: 1.00 // 1 50 ENSP00000371607/1-713 ---------M LCVGRLGGL- ---------- ---------- ---------- ENSBTAP00000011704/1-712 --------SA RSRGARALP- ---------- ---------- ---------- bmy_22184T0/1-412 RAGALEAAAR ESGGRRSGPA DADVRWPRGL VPFPEARGHV VGGRCCGDAA BACU000148/1-566 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000371607/1-713 ---------- ---------- --GARAAALP PRRAGRGSLE AGIRARRVST ENSBTAP00000011704/1-712 ---------- ---------- --RKRGEMLC ARRLGG--LR AGLRVRRVST bmy_22184T0/1-412 RSPAGLRAGF WSSVPRALAA RSGCSGAMLC ARRLGR--LG AGLRVRWVST BACU000148/1-566 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000371607/1-713 SWSPVGAAFN VKPQGSRLDL FGERRGLFGV PELSAPEGFH IAQEKALRKT ENSBTAP00000011704/1-712 GWSPVGAAFT VQPQGRRLDW FGERGGLFGV PELSAPEGFR VAQEKALRRT bmy_22184T0/1-412 SWSPVGAAFN VQPQGRRLDL FGERRGLFGV PELSAPEGFR VAQEKALRKT BACU000148/1-566 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000371607/1-713 ELLVDRACST PPGPQTVLIF DELSDSLCRV ADLADFVKIA HPEPAFREAA ENSBTAP00000011704/1-712 EQLVQRVCAT PPGPQTVLIF DELSDSLCRV ADLADFVKIA HPEAAFREAA bmy_22184T0/1-412 EQLVGRVCSA PPGPQTVLIF DELSDSLCRV ADLADFVKIA HPEAAFREAA BACU000148/1-566 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000371607/1-713 EEACRSIGTM VEKLNTNVDL YQSLQKLLAD KKLVDSLDPE TRRVAELFMF ENSBTAP00000011704/1-712 EEACRSIGTM VEKLNTNVEL YQSLQRLLAD KKLVDSLDPE TRRVAELFMF bmy_22184T0/1-412 EEACRSIGAM VETLNTNVEL YQSLQKLLAD KKLVDSLDPE TRRVAELFMF BACU000148/1-566 ---------M VETLNTNVEL YQSLQKLLAD KKLVDSLDPE TRRVAELFMF 251 300 ENSP00000371607/1-713 DFEISGIHLD KEKRKRAVDL NVKILDLSST FLMGTNFPNK IEKHLLPEHI ENSBTAP00000011704/1-712 DFEISGIHLD REKRKRAVDL NVKILDLSSA FLMGTHLPNT IEKRLLPEGI bmy_22184T0/1-412 DFEISGIHLD REKRKRAVDL NVKILDLSSA FLMGTHFPSK VEKHLLPEHI BACU000148/1-566 DFEISGIHLD REKRKRAVDL NVKILDLSSA FLMGTHFPSR IEKHLLPEHI 301 350 ENSP00000371607/1-713 RRNFTSAGDH IIIDGLHAES PDDLVREAAY KIFLYPNAGQ LKCLEELLSS ENSBTAP00000011704/1-712 RHHFELAGDH AVVDSLRAEA PDDLVREAAY KIFLYPNAGQ LKRLEELLSS bmy_22184T0/1-412 RHHFELAGDH VLVDGLRAEV PDDLVREAAY KIFLYPNAGQ LKCLEELLSN BACU000148/1-566 RHHFELAGDH VLVDGLRAEV PDDLVREAAY KIFLYPNAGQ LKCLEELLSN 351 400 ENSP00000371607/1-713 RDLLAKLVGY STFSHRALQG TIAKNPETVM QFLEKLSDKL SERTLKDFEM ENSBTAP00000011704/1-712 RDLLAKLVGY PTYSHRALQG TIAQSPETVM EFLEKLSDKL SERTMKDFEM bmy_22184T0/1-412 RDLLAKLVGY STYSHRALQG TMAKNPETVM QFLEKLSDKL SERTIKDFEM BACU000148/1-566 RDLLAKLVGY STYSHRALQG TMAKNPETVM QFLEKLSDKL SERTIKDFEM 401 450 ENSP00000371607/1-713 IRGMKMKLNP QNSEVMPWDP PYYSGVIRAE RYNIEPSLYC PFFSLGACME ENSBTAP00000011704/1-712 IRGMKMKLNP QNSELMPWDP PYYSGLIRAE RFNIEPGLYC PFFSLGACME bmy_22184T0/1-412 IRGMKMKLNP QNSV------ ---------- ---------- ---------- BACU000148/1-566 IRGMKMKLNP QNSELMPWDP PYYSGVLRAE RYNSEPSLYC PFFSLGACME 451 500 ENSP00000371607/1-713 GLNILLNRLL GISLYAEQPA KGEVWSEDVR KLAVVHESEG LLGYIYCDFF ENSBTAP00000011704/1-712 GLSLLFNRLL GVSLYGEQPV KGEVWSEDVR KLAVVHESEG LLGYIYCDFF bmy_22184T0/1-412 ---------- ---------- ---------- ---------- ---------- BACU000148/1-566 GLNILFNRLF GISLYVEQPA KGEVWCEDVR KLAVVHESEG LLGYIYCDFF 501 550 ENSP00000371607/1-713 QRADKPHQDC HFTIRGGRLK EDGDYQLPVV VLMLNLPRSS RSSPTLLTPS ENSBTAP00000011704/1-712 QRADKPHQDC HFTIRGGRLK EDGDYQLPVV VLMLNLPHSS RNLPTLLTPG bmy_22184T0/1-412 ---------- ---------- ---------- ---------- ---------- BACU000148/1-566 QRADKPHQDC HFTIRGGRLK EDGDYQLPVV VLMLNLPHPS KNLPTLLTPG 551 600 ENSP00000371607/1-713 MMENLFHEMG HAMHSMLGRT RYQHVTGTRC PTDFAEVPSI LMEYFANDYR ENSBTAP00000011704/1-712 MMENLFHEMG HAMHSMLGRT RYQHVTGTRC PTDFAEVPSI LMEYFANDYR bmy_22184T0/1-412 ---------- ---------- ---------- ---------- ---------- BACU000148/1-566 MMENLFHEMG HAMHSMLGRT RYQHVTGTRC PTDFAEVPSI LMEYFANDYR 601 650 ENSP00000371607/1-713 VVNQFARHYQ TGQPLPKNMV SRLCESKKVC AAADMQLQVF YATLDQIYHG ENSBTAP00000011704/1-712 VVHQFARHYQ TGQSLPRNMV SRLCESKKVC AAADMQLQVF YAALDQIYHG bmy_22184T0/1-412 ---------- ---------- ---------- ---------- ---------- BACU000148/1-566 VVHQFARHYQ TGQSLPRNMV SRLCESKKVC AAADMQLQVF YAALDQIYHG 651 700 ENSP00000371607/1-713 KHPLRNSTTD ILKETQEKFY GLPYVPNTAW QLRFSHLVGY GARYYSYLMS ENSBTAP00000011704/1-712 KHPLRSSTTD ILRDTQERFY GLPYVPNTAW QLRFSHLVGY GAKYYSYLMS bmy_22184T0/1-412 ---------- ---------- ---------- ---------- ---------- BACU000148/1-566 KHPLRSSTTD ILRDTQEKFY GLPYVPNTAW QLRFSHLVGY GAKYYSYLVS 701 750 ENSP00000371607/1-713 RAVASMVWKE CFLQDPFNRA AGERYRREML AHGGGREPML MVEGMLQKCP ENSBTAP00000011704/1-712 RAVASMVWRE CFRQDPFNRA AGERYRREML AHGGGREPML MVQGMLQKRP bmy_22184T0/1-412 ---------- ---------- ---------- ---------- ---------- BACU000148/1-566 RAVASMVWTE CFLRDPFNRA AGERYRREML AHGGGKEPLL MVQGVLQKCP 751 800 ENSP00000371607/1-713 SVDDFVSALV SDLDLDFETF LMDSE ENSBTAP00000011704/1-712 SIDDFVNTLV SDLDLDFETF LMDST bmy_22184T0/1-412 ---------- ---------- ----- BACU000148/1-566 SIDDFVNALV SDLDMDLETF LMDSE