KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:44:36 2014 Check: 00 .. Name: BACU010999/1-474 Len: 475 Check: 1967 Weight: 1.00 Name: ENSP00000302251/1-348 Len: 475 Check: 4616 Weight: 1.00 Name: bmy_03204T0/1-339 Len: 475 Check: 4833 Weight: 1.00 Name: ENSBTAP00000011716/1-349 Len: 475 Check: 3976 Weight: 1.00 Name: ENSTTRP00000007044/1-348 Len: 475 Check: 3562 Weight: 1.00 // 1 50 BACU010999/1-474 MSNSDCLPDY PVNSDFVKRL KSALEARDEA RVRDLICTEV RHVDAVIELA ENSP00000302251/1-348 -----MSAAF PPSLMMMQR- ---------- ---PLGSSTA FSIDSLI--- bmy_03204T0/1-339 ---------- ----MMMQR- ---------- ---PLGSSTA FSIDSLI--- ENSBTAP00000011716/1-349 -----MSAAF PPSLMMMQR- ---------- ---PLGSSTA FSIDSLI--- ENSTTRP00000007044/1-348 -----MSAAF PPSLMMMQR- ---------- ---PLGSSTA FSIDSLI--- 51 100 BACU010999/1-474 NDDWMKDPSA QLPPGVLLGD LDHLKLLMDQ FFQDANVVFE IKKDEMEWQV ENSP00000302251/1-348 ------GSPP QPSPGHFV-- ---------- ---------- ---------- bmy_03204T0/1-339 ------GSPP QPSPGHFV-- ---------- ---------- ---------- ENSBTAP00000011716/1-349 ------GSPP QPSPGHFV-- ---------- ---------- ---------- ENSTTRP00000007044/1-348 ------GSPP QPSPGHFV-- ---------- ---------- ---------- 101 150 BACU010999/1-474 KSLATFGPSG ADAGALDYGG ASPLARVLHT AACAPEAAPQ RTLQALLNHG ENSP00000302251/1-348 ---------- -------YTG YPMFMPYRPV VLPPPPPPPP ALPQAALQPA bmy_03204T0/1-339 ---------- -------YTG YPMFMPYRPV VLPPPPPPPP ALPQAALQPA ENSBTAP00000011716/1-349 ---------- -------YTG YPMFMPYRPV VLPPPPPPPP ALPQAALQPA ENSTTRP00000007044/1-348 ---------- -------YTG YPMFMPYRPV VLPPPPPPPP ALPQAALQPA 151 200 BACU010999/1-474 SPTVWPHAFP KVLKTCAPAP AVLEVLFNSY SQ-LRVSESW KEVIPEEVFQ ENSP00000302251/1-348 LPPAHPH--- ------HQIP SLPTGFCSSL AQGMALTSTL MATLPGG-FS bmy_03204T0/1-339 LPPAHPH--- ------HQIP SLPTSFCSSL AQGMALTSTL MATLPGG-FS ENSBTAP00000011716/1-349 LPPAHPH--- ------HQIP SLPTGFCSSL AQGMALTSTL MATLPGG-FS ENSTTRP00000007044/1-348 LPPAHPH--- ------HQIP SLPTSFCSSL AQGMALTSTL MATLPGG-FS 201 250 BACU010999/1-474 VHQPFYESLF ALAYTPRCLQ HLCRCTIRKL FGRSSALGQH GPMCNRNRAM ENSP00000302251/1-348 ASPQHQEAAA ARKFAPQ--- ---------- ---------- -PLPGGG-NF bmy_03204T0/1-339 ASPQHQEAAA ARKFAPQ--- ---------- ---------- -PLPGGG-NF ENSBTAP00000011716/1-349 ASPQHQEAAA ARKFAPQ--- ---------- ---------- -QLPGGGSNF ENSTTRP00000007044/1-348 ASPQHQEAAA ARKFAPQ--- ---------- ---------- -PLPGGG-NF 251 300 BACU010999/1-474 NRASKDVRKS FTLPPTQAEA LQADAEDGKG FLAKEGSLLA FSAAEAVQAS ENSP00000302251/1-348 DK-------- -------AEA LQADAEDGKG FLAKEGSLLA FSAAETVQAS bmy_03204T0/1-339 DK-------- -------AEP LQADAEDGKA FLAKEGSLLA FSAAEAVQAS ENSBTAP00000011716/1-349 DK-------- -------PEA LQADAEDGKG FLAKEGSLLA FSAAEAVQAS ENSTTRP00000007044/1-348 DK-------- -------AEA LQADAEDGKG FLAKEGSLLA FSAAEAVQAS 301 350 BACU010999/1-474 LVGAVRGQGK DESKVEDDPK GKEESFSLES DLEYSSDDNL TGQAAHKEED ENSP00000302251/1-348 LVGAVRGQGK DESKVEDDPK GKEESFSLES DVDYSSDDNL TGQAAHKEED bmy_03204T0/1-339 LVGAVRGQGK DESKVEDDPK GKEESFSLES DLEYSSDDNL TGQAAHKEED ENSBTAP00000011716/1-349 LVGAVRGQGK DESKVEDDPK GKEESFSLES DLDYSSDDNL TGQAAHKEED ENSTTRP00000007044/1-348 LVGAVRGQGK DESKVEDDPK GKEESFSLES DLDYSSDDNL TGQAAHKEED 351 400 BACU010999/1-474 PGHALEETPP SGGGAGSTTS TGKNRRRRTA FTSEQLLELE KEFHCKKYLS ENSP00000302251/1-348 PGHALEETPP SSGAAGSTTS TGKNRRRRTA FTSEQLLELE KEFHCKKYLS bmy_03204T0/1-339 PGHALEETPP SGGGAGSTTS TGKNRRRRTA FTSEQLLELE KEFHCKKYLS ENSBTAP00000011716/1-349 PGHALEETPP SGGAAGSTTS TGKNRRRRTA FTSEQLLELE KEFHCKKYLS ENSTTRP00000007044/1-348 PGHALEETPP SGGGAGSTTS TGKNRRRRTA FTSEQLLELE KEFHCKKYLS 401 450 BACU010999/1-474 LTERSQIAHA LKLSEVQVKI WFQNRRAKWK RVKAGNANSK TGEPSRNPKI ENSP00000302251/1-348 LTERSQIAHA LKLSEVQVKI WFQNRRAKWK RVKAGNANSK TGEPSRNPKI bmy_03204T0/1-339 LTERSQIAHA LKLSEVQVKI WFQNRRAKWK RVKAGNANSK TGEPSRNPKI ENSBTAP00000011716/1-349 LTERSQIAHA LKLSEVQVKI WFQNRRAKWK RVKAGNANSK TGEPSRNPKI ENSTTRP00000007044/1-348 LTERSQIAHA LKLSEVQVKI WFQNRRAKWK RVKAGNANSK TGEPSRNPKI 451 500 BACU010999/1-474 VVPIPVHVSR FAIRSQHQQL EQARP ENSP00000302251/1-348 VVPIPVHVSR FAIRSQHQQL EQARP bmy_03204T0/1-339 VVPIPVHVSR FAIRSQHQQL EQARP ENSBTAP00000011716/1-349 VVPIPVHVSR FAIRSQHQQL EQARP ENSTTRP00000007044/1-348 VVPIPVHVSR FAIRSQHQQL EQARP